Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15886 Sapria himalayana HOM05D003883 ORTHO05D004605 2.5e-107 392.1 200 100.0
SHI01632 Sapria himalayana HOM05D003883 ORTHO05D004605 6.9e-81 304.3 207 81.2
SHI09697 Sapria himalayana HOM05D003883 ORTHO05D004605 4.5e-80 301.6 243 71.2
SHI47005 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-79 300.1 200 82.0
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-78 297.0 205 80.0
SHI17604 Sapria himalayana HOM05D003883 ORTHO05D004605 3.9e-76 288.5 208 74.5
SHI16558 Sapria himalayana HOM05D003883 ORTHO05D004605 6.7e-76 287.7 206 78.6
SHI36014 Sapria himalayana HOM05D003883 ORTHO05D004605 9.7e-75 283.9 239 67.4
SHI13269 Sapria himalayana HOM05D003883 ORTHO05D004605 4.5e-72 275.0 208 75.0
SHI16809 Sapria himalayana HOM05D003883 ORTHO05D004605 5.0e-71 271.6 177 82.5
SHI24738 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-70 270.4 208 73.6
SHI48034 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-67 259.6 164 84.1
SHI31989 Sapria himalayana HOM05D003883 ORTHO05D004605 1.4e-65 253.4 168 82.7
SHI16150 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-63 246.1 203 68.0
SHI00855 Sapria himalayana HOM05D000105 ORTHO05D000023 8.5e-63 244.2 168 81.0
SHI34947 Sapria himalayana HOM05D003883 ORTHO05D004605 8.0e-61 237.7 167 79.0
SHI45438 Sapria himalayana HOM05D003883 ORTHO05D004605 1.4e-60 236.9 169 77.5
SHI19852 Sapria himalayana HOM05D003883 ORTHO05D004605 3.1e-57 225.7 191 69.6
SHI49925 Sapria himalayana HOM05D003883 ORTHO05D004605 5.3e-57 224.9 143 83.9
SHI45198 Sapria himalayana HOM05D003883 ORTHO05D004605 7.0e-57 224.6 199 65.8
SHI22734 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-56 223.0 183 67.8
SHI50134 Sapria himalayana HOM05D003883 ORTHO05D004605 3.8e-55 218.8 143 81.8
SHI12193 Sapria himalayana HOM05D000105 ORTHO05D004605 2.1e-53 213.0 194 66.0
SHI15221 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-52 209.5 163 71.2
SHI28093 Sapria himalayana HOM05D002538 ORTHO05D000001 1.9e-46 189.9 165 66.1
SHI40358 Sapria himalayana HOM05D003883 ORTHO05D004605 3.6e-45 185.7 110 89.1
SHI01655 Sapria himalayana HOM05D002349 ORTHO05D002464 1.2e-43 180.6 196 56.6
SHI27587 Sapria himalayana HOM05D003883 ORTHO05D004605 2.6e-43 179.5 134 74.6
SHI03434 Sapria himalayana HOM05D003883 ORTHO05D004605 9.2e-41 171.0 176 58.5
SHI29471 Sapria himalayana HOM05D003883 ORTHO05D004605 2.5e-38 162.9 101 84.2
SHI52029 Sapria himalayana HOM05D003883 ORTHO05D004605 8.9e-36 154.5 97 81.4
SHI53632 Sapria himalayana HOM05D003883 ORTHO05D004605 8.9e-36 154.5 109 78.0
SHI25304 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-35 153.3 145 62.8
SHI22499 Sapria himalayana HOM05D003883 ORTHO05D004605 9.8e-35 151.0 175 54.3
Thecc.04G023200 Theobroma cacao HOM05D003883 ORTHO05D004605 1.1e-30 137.5 167 51.5
CiPaw.03G013400 Carya illinoinensis HOM05D003883 ORTHO05D004605 1.9e-30 136.7 164 52.4
SHI46342 Sapria himalayana HOM05D003883 ORTHO05D000233 4.3e-30 135.6 140 57.1
SHI46947 Sapria himalayana HOM05D003883 ORTHO05D000233 4.3e-30 135.6 140 57.1
Potri.019G069000 Populus trichocarpa HOM05D003883 ORTHO05D004605 7.3e-30 134.8 165 53.9
GSVIVG01037209001 Vitis vinifera HOM05D003883 ORTHO05D004605 7.3e-30 134.8 164 50.6
Sabra19G0082500 Salix brachista HOM05D003883 ORTHO05D004605 1.4e-28 130.6 165 53.3
Cpa.g.sc21.99 Carica papaya HOM05D003883 ORTHO05D004605 2.3e-28 129.8 164 49.4
SHI20166 Sapria himalayana HOM05D003883 ORTHO05D004605 3.1e-28 129.4 71 91.5
Dinv22125 Davidia involucrata HOM05D003883 ORTHO05D004605 1.2e-27 127.5 167 48.5
MD10G1003200 Malus domestica HOM05D003883 ORTHO05D004605 1.2e-27 127.5 160 49.4
RcHm_v2.0_Chr6g0251031 Rosa chinensis HOM05D003883 ORTHO05D004605 2.6e-27 126.3 161 47.8
TWI12G1089 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 2.6e-27 126.3 163 49.1
FAN06G0896 Fragaria x ananassa HOM05D003883 ORTHO05D004605 4.4e-27 125.6 163 49.1
Gorai.012G046700 Gossypium raimondii HOM05D003883 ORTHO05D004605 4.4e-27 125.6 161 49.1
Glyma.10G214800 Glycine max HOM05D003883 ORTHO05D004605 5.8e-27 125.2 166 48.8
Manes.18G112700 Manihot esculenta HOM05D003883 ORTHO05D004605 5.8e-27 125.2 125 59.2
FvH4_2g00580 Fragaria vesca HOM05D003883 ORTHO05D004605 9.8e-27 124.4 161 49.1
ClCG08G001170 Citrullus lanatus HOM05D003883 ORTHO05D004605 1.3e-26 124.0 170 48.8
Gohir.D04G041300 Gossypium hirsutum HOM05D003883 ORTHO05D004605 1.3e-26 124.0 161 48.4
SGA_v2.0_scaffold118G32634 Striga asiatica HOM05D003883 ORTHO05D004605 1.3e-26 124.0 164 48.2
Sed0003271 Sechium edule HOM05D003883 ORTHO05D004605 1.7e-26 123.6 168 48.2
Hma1.2p1_1248F.1_g270250 Hydrangea macrophylla HOM05D003883 ORTHO05D004605 2.2e-26 123.2 166 47.6
FAN27G2158 Fragaria x ananassa HOM05D003883 ORTHO05D004605 2.9e-26 122.9 164 48.8
Peaxi162Scf00078g00928 Petunia axillaris HOM05D003883 ORTHO05D004605 3.7e-26 122.5 172 47.7
QL09p001675 Quercus lobata HOM05D003883 ORTHO05D004605 6.4e-26 121.7 162 48.8
MSTRG.1604 Avicennia marina HOM05D003883 ORTHO05D004605 8.3e-26 121.3 163 46.6
Aqoxy5G01863 Aquilegia oxysepala HOM05D003883 ORTHO05D004605 1.4e-25 120.6 159 48.4
Haze_13971 Corylus avellana HOM05D003883 ORTHO05D004605 1.4e-25 120.6 164 47.0
Atru.chr13.2533 Acer truncatum HOM05D003883 ORTHO05D004605 2.4e-25 119.8 167 47.9
FAN20G1119 Fragaria x ananassa HOM05D003883 ORTHO05D004605 2.4e-25 119.8 163 49.7
Nitab4.5_0001202g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 3.2e-25 119.4 177 47.5
SHI51464 Sapria himalayana HOM05D003883 ORTHO05D004605 3.2e-25 119.4 106 68.9
CsaV3_5G039780 Cucumis sativus L. HOM05D003883 ORTHO05D004605 9.2e-25 117.9 164 50.0
Lalb_Chr02g0141881 Lupinus albus HOM05D003883 ORTHO05D004605 1.2e-24 117.5 160 48.1
arahy.Tifrunner.gnm1.ann1.6B58CR Arachis hypogaea HOM05D003883 ORTHO05D004605 2.0e-24 116.7 161 47.8
arahy.Tifrunner.gnm1.ann1.DBA4ID Arachis hypogaea HOM05D003883 ORTHO05D004605 2.0e-24 116.7 164 47.6
Lj5g0005523 Lotus japonicus HOM05D003883 ORTHO05D004605 2.7e-24 116.3 165 47.9
TWI75G0838 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 4.6e-24 115.5 166 47.6
Nitab4.5_0000009g0400 Nicotiana tabacum HOM05D003883 ORTHO05D004605 6.0e-24 115.2 175 45.7
TAR633G0350 Trochodendron aralioides HOM05D003883 ORTHO05D004605 7.8e-24 114.8 160 45.0
CSS0035251 Camellia sinensis var. sinensis HOM05D003883 ORTHO05D004605 1.7e-23 113.6 166 45.2
Duzib147G1304 Durio zibethinus HOM05D003883 ORTHO05D004605 1.7e-23 113.6 140 52.9
Psat6g186320 Pisum sativum HOM05D003883 ORTHO05D004605 2.3e-23 113.2 165 45.5
Cfa008054 Carpinus fangiana HOM05D003883 ORTHO05D004605 3.0e-23 112.8 161 44.7
MBI03_g20879_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 3.0e-23 112.8 177 41.8
MELO3C033524.2 Cucumis melo HOM05D003883 ORTHO05D004605 3.9e-23 112.5 141 52.5
Ciclev10022415m.g Citrus clementina HOM05D003883 ORTHO05D004605 5.0e-23 112.1 162 44.4
Ah.05g170410 Amaranthus hybridus HOM05D003883 ORTHO05D004605 6.6e-23 111.7 167 45.5
MSTRG.25500 Avicennia marina HOM05D003883 ORTHO05D004605 6.6e-23 111.7 148 51.4
SalBow7G2433 Salvia bowleyana HOM05D003883 ORTHO05D004605 6.6e-23 111.7 189 45.0
GSVIVG01011528001 Vitis vinifera HOM05D003883 ORTHO05D004605 6.6e-23 111.7 160 46.9
PSO210G0567 Papaver somniferum HOM05D003883 ORTHO05D004605 8.6e-23 111.3 157 47.1
Medtr1g096170 Medicago truncatula HOM05D003883 ORTHO05D004605 1.1e-22 110.9 171 46.8
Glyma.20G177100 Glycine max HOM05D003883 ORTHO05D004605 1.5e-22 110.5 123 53.7
PGSC0003DMG400026862 Solanum tuberosum HOM05D003883 ORTHO05D004605 1.5e-22 110.5 147 50.3
Gohir.A05G374200 Gossypium hirsutum HOM05D003883 ORTHO05D004605 2.5e-22 109.8 131 52.7
Sp6g07310 Schrenkiella parvula HOM05D003883 ORTHO05D004605 2.5e-22 109.8 159 47.2
Nn5g27336 Nelumbo nucifera HOM05D003883 ORTHO05D004605 3.3e-22 109.4 164 42.7
PGR042G1493 Punica granatum HOM05D003883 ORTHO05D004605 3.3e-22 109.4 164 45.1
BcaB01g01452 Brassica carinata HOM05D003883 ORTHO05D004605 4.3e-22 109.0 79 73.4
Cc10_g16020 Coffea canephora HOM05D003883 ORTHO05D004605 4.3e-22 109.0 155 47.7
Sopen11g016790 Solanum pennellii HOM05D003883 ORTHO05D004605 4.3e-22 109.0 132 53.0
AT4G10110 Arabidopsis thaliana HOM05D003883 ORTHO05D004605 5.6e-22 108.6 161 47.2
Aa31LG9G11890 Aethionema arabicum HOM05D003883 ORTHO05D004605 9.5e-22 107.8 78 71.8
PSO761G0643 Papaver somniferum HOM05D003883 ORTHO05D004605 9.5e-22 107.8 157 45.9
Phvul.007G091200 Phaseolus vulgaris HOM05D003883 ORTHO05D004605 9.5e-22 107.8 124 53.2
BcaC04g21018 Brassica carinata HOM05D003883 ORTHO05D004605 1.2e-21 107.5 79 72.2
C09p36620 Brassica napus HOM05D003883 ORTHO05D004605 1.2e-21 107.5 79 72.2
BolC9t56494H Brassica oleracea HOM05D003883 ORTHO05D004605 1.2e-21 107.5 79 72.2
MBI10_g20271_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.2e-21 107.5 165 41.8
VMungo0720G2352 Vigna mungo HOM05D003883 ORTHO05D004605 1.2e-21 107.5 162 44.4
Thhalv10029015m.g Eutrema salsugineum HOM05D003883 ORTHO05D004605 1.6e-21 107.1 160 48.1
Ca_10599_v3 Cicer arietinum L. HOM05D003883 ORTHO05D004605 2.1e-21 106.7 164 44.5
Cc10_g13970 Coffea canephora HOM05D003883 ORTHO05D004605 2.1e-21 106.7 155 47.1
A09p28820 Brassica napus HOM05D003883 ORTHO05D004605 2.8e-21 106.3 79 70.9
BraA09t38444Z Brassica rapa HOM05D003883 ORTHO05D004605 2.8e-21 106.3 79 70.9
EL10Ac1g01277 Beta vulgaris HOM05D003883 ORTHO05D004605 3.6e-21 105.9 167 44.3
Eucgr.F02940 Eucalyptus grandis HOM05D003883 ORTHO05D004605 3.6e-21 105.9 166 46.4
SHI53439 Sapria himalayana HOM05D003883 ORTHO05D004605 3.6e-21 105.9 85 64.7
SHI53701 Sapria himalayana HOM05D003883 ORTHO05D004605 3.6e-21 105.9 71 80.3
Hund26941 Selenicereus undatus HOM05D003883 ORTHO05D004605 3.6e-21 105.9 164 45.7
SHI47059 Sapria himalayana HOM05D003883 ORTHO05D004605 4.7e-21 105.5 71 80.3
Sc10g0006520 Simmondsia chinensis HOM05D003883 ORTHO05D004605 4.7e-21 105.5 165 46.7
COL.COLO4_25136 Corchorus olitorius HOM05D003883 ORTHO05D004605 6.2e-21 105.1 154 48.1
HanXRQChr05g0150991 Helianthus annuus HOM05D003883 ORTHO05D004605 8.1e-21 104.8 142 50.7
SEGI_10411 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 1.1e-20 104.4 142 45.1
Rhsim02G0081700 Rhododendron simsii HOM05D003883 ORTHO05D004605 1.4e-20 104.0 160 44.4
Actinidia29370 Actinidia chinensis HOM05D003883 ORTHO05D004605 1.8e-20 103.6 161 44.1
CARHR261150 Cardamine hirsuta HOM05D003883 ORTHO05D004605 1.8e-20 103.6 76 71.1
CsaV3_5G039770 Cucumis sativus L. HOM05D003883 ORTHO05D004605 1.8e-20 103.6 164 45.7
Lsat_1_v5_gn_6_111041 Lactuca sativa HOM05D003883 ORTHO05D004605 1.8e-20 103.6 96 63.5
TPR.G1761 Trifolium pratense HOM05D003883 ORTHO05D004605 1.8e-20 103.6 165 43.6
AUR62013386 Chenopodium quinoa HOM05D003883 ORTHO05D004605 2.3e-20 103.2 167 43.7
AL6G43920 Arabidopsis lyrata HOM05D003883 ORTHO05D004605 3.1e-20 102.8 164 47.0
AUR62038537 Chenopodium quinoa HOM05D003883 ORTHO05D004605 3.1e-20 102.8 165 42.4
Os05g0427300 Oryza sativa ssp. japonica HOM05D003883 ORTHO05D004605 4.0e-20 102.4 160 43.1
Solyc11g039950.3 Solanum lycopersicum HOM05D003883 ORTHO05D004605 4.0e-20 102.4 124 53.2
ECA246G4775 Erigeron canadensis HOM05D003883 ORTHO05D004605 5.2e-20 102.1 108 56.5
HanXRQChr12g0369281 Helianthus annuus HOM05D003883 ORTHO05D004605 5.2e-20 102.1 88 62.5
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 5.2e-20 102.1 117 50.4
DCAR_010106 Daucus carota HOM05D003883 ORTHO05D004605 1.2e-19 100.9 76 68.4
Sed0024898 Sechium edule HOM05D003883 ORTHO05D004605 1.2e-19 100.9 128 51.6
THA.LOC104815789 Tarenaya hassleriana HOM05D003883 ORTHO05D004605 1.2e-19 100.9 176 42.6
Migut.C01393 Erythranthe guttata HOM05D003883 ORTHO05D004605 2.0e-19 100.1 166 45.8
Lj7P418T16 Lonicera japonica HOM05D003883 ORTHO05D004605 2.0e-19 100.1 76 68.4
Oeu028627.2 Olea europaea HOM05D003883 ORTHO05D004605 2.0e-19 100.1 189 40.7
CANSAT01G1230 Cannabis sativa HOM05D003883 ORTHO05D004605 3.4e-19 99.4 162 45.1
DCAR_001170 Daucus carota HOM05D003883 ORTHO05D004605 7.5e-19 98.2 163 44.2
SHI20281 Sapria himalayana HOM05D003883 ORTHO05D004605 1.7e-18 97.1 144 45.1
MELO3C022158.2 Cucumis melo HOM05D003883 ORTHO05D004605 6.4e-18 95.1 89 59.6
SHI47009 Sapria himalayana HOM05D003883 ORTHO05D004605 1.2e-16 90.9 62 79.0
CDE04G3585 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 1.6e-16 90.5 161 41.0
ClCG08G000830 Citrullus lanatus HOM05D003883 ORTHO05D004605 2.1e-16 90.1 71 69.0
SHI54185 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-16 89.7 71 70.4
unitig_749.g13869 Utricularia gibba HOM05D003883 ORTHO05D004605 7.8e-16 88.2 163 36.8
HPP92_004500 Vanilla planifolia HOM05D003883 ORTHO05D004605 7.8e-16 88.2 91 54.9
Zm00001eb145960 Zea mays HOM05D003883 ORTHO05D004605 8.6e-15 84.7 173 39.9
Carub.0006s2868 Capsella rubella HOM05D003883 ORTHO05D004605 1.5e-14 84.0 150 44.0
MBI17_g19026_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.5e-14 84.0 81 51.9
MBI18_g04721_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.5e-14 84.0 86 54.7
DCAR_027538 Daucus carota HOM05D003883 ORTHO05D004605 3.3e-14 82.8 72 58.3
Nitab4.5_0005094g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 3.3e-14 82.8 72 61.1
AagrBONN_evm.TU.Sc2ySwM_228.826 Anthoceros agrestis HOM05D003883 ORTHO05D004605 1.6e-13 80.5 76 51.3
Lsat_1_v5_gn_8_63781 Lactuca sativa HOM05D003883 ORTHO05D004605 4.7e-13 79.0 76 57.9
Mapoly0019s0080 Marchantia polymorpha HOM05D003883 ORTHO05D004605 4.0e-12 75.9 155 33.5
Solyc10g081990.1 Solanum lycopersicum HOM05D003883 ORTHO05D004605 4.0e-12 75.9 72 55.6
SEGI_14755 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 8.9e-12 74.7 144 38.2
SMO239G0046 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 2.6e-11 73.2 76 46.1
SMO307G0014 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 2.6e-11 73.2 76 46.1
CDE02G3110 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 3.4e-11 72.8 164 37.8
SHI37949 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-10 70.9 48 75.0
RcHm_v2.0_Chr6g0280021 Rosa chinensis HOM05D003883 ORTHO05D004605 1.7e-10 70.5 114 41.2
CBR_g955 Chara braunii HOM05D003883 ORTHO05D004605 3.8e-10 69.3 75 42.7
ATR1089G108 Amborella trichopoda HOM05D003883 ORTHO05D004605 8.4e-10 68.2 99 42.4
Thecc.08G180600 Theobroma cacao HOM05D003883 ORTHO05D004605 2.7e-08 63.2 144 34.7
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 3.0e-07 59.7 54 55.6
Prupe.8G005800 Prunus persica HOM05D003883 ORTHO05D004605 5.1e-07 58.9 128 35.9
Actinidia03532 Actinidia chinensis HOM05D003883 ORTHO05D004605 5.6e-06 55.5 157 31.2


User provided reference genes

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