Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15643 Sapria himalayana HOM05D003193 ORTHO05D004924 8.3e-205 716.8 371 100.0
QL03p032698 Quercus lobata HOM05D003193 ORTHO05D004924 4.4e-89 332.4 328 54.6
Manes.09G146200 Manihot esculenta HOM05D003193 ORTHO05D004924 5.4e-87 325.5 309 55.3
Potri.019G024200 Populus trichocarpa HOM05D003193 ORTHO05D004924 2.7e-86 323.2 307 56.7
Atru.chr2.1127 Acer truncatum HOM05D003193 ORTHO05D004924 2.3e-85 320.1 306 54.9
CiPaw.07G075300 Carya illinoinensis HOM05D003193 ORTHO05D004924 1.1e-84 317.8 306 53.9
Thecc.05G265800 Theobroma cacao HOM05D003193 ORTHO05D004924 1.5e-84 317.4 306 57.2
Duzib177G0185 Durio zibethinus HOM05D003193 ORTHO05D004924 1.9e-84 317.0 309 55.7
COL.COLO4_37867 Corchorus olitorius HOM05D003193 ORTHO05D004924 5.6e-84 315.5 309 56.3
GSVIVG01026340001 Vitis vinifera HOM05D003193 ORTHO05D004924 1.6e-83 313.9 309 54.0
CANSAT54G2238 Cannabis sativa HOM05D003193 ORTHO05D004924 3.6e-83 312.8 309 52.4
Sabra19G0034100 Salix brachista HOM05D003193 ORTHO05D004924 3.6e-83 312.8 307 55.4
Lalb_Chr04g0261971 Lupinus albus HOM05D003193 ORTHO05D004924 8.9e-82 308.1 306 55.2
TWI60G0900 Tripterygium wilfordii HOM05D003193 ORTHO05D004924 1.2e-81 307.8 307 54.1
MD12G1252000 Malus domestica HOM05D003193 ORTHO05D004924 2.6e-81 306.6 307 52.1
Gorai.007G272000 Gossypium raimondii HOM05D003193 ORTHO05D004924 4.4e-81 305.8 309 54.4
Gohir.A11G243500 Gossypium hirsutum HOM05D003193 ORTHO05D004924 1.7e-80 303.9 309 54.7
Gohir.D11G253200 Gossypium hirsutum HOM05D003193 ORTHO05D004924 4.9e-80 302.4 309 54.0
Ciclev10018428m.g Citrus clementina HOM05D003193 ORTHO05D004924 6.4e-80 302.0 306 52.9
Dinv06951 Davidia involucrata HOM05D003193 ORTHO05D004924 6.4e-80 302.0 306 51.3
Prupe.6G353600 Prunus persica HOM05D003193 ORTHO05D004924 6.4e-80 302.0 307 52.8
TAR365G0326 Trochodendron aralioides HOM05D003193 ORTHO05D004924 4.1e-79 299.3 307 52.4
MELO3C008660.2 Cucumis melo HOM05D003193 ORTHO05D004924 5.4e-79 298.9 307 51.1
Lj1g0024446 Lotus japonicus HOM05D003193 ORTHO05D004924 7.1e-79 298.5 306 54.2
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 9.2e-79 298.1 307 51.5
Eucgr.H04206 Eucalyptus grandis HOM05D003193 ORTHO05D004924 9.2e-79 298.1 309 49.8
RcHm_v2.0_Chr3g0449041 Rosa chinensis HOM05D003193 ORTHO05D004924 9.2e-79 298.1 265 56.2
Ca_09471_v3 Cicer arietinum L. HOM05D003193 ORTHO05D004924 1.2e-78 297.7 306 53.3
TAR636G0188 Trochodendron aralioides HOM05D003193 ORTHO05D004924 1.2e-78 297.7 306 51.3
FAN02G3021 Fragaria x ananassa HOM05D003193 ORTHO05D004924 7.8e-78 295.0 265 56.2
FAN05G0534 Fragaria x ananassa HOM05D003193 ORTHO05D004924 7.8e-78 295.0 255 58.0
Actinidia03822 Actinidia chinensis HOM05D003193 ORTHO05D004924 1.0e-77 294.7 309 51.1
FAN05G3617 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.0e-77 294.7 265 56.2
TPR.G4710 Trifolium pratense HOM05D003193 ORTHO05D004924 1.0e-77 294.7 306 52.6
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea HOM05D003193 ORTHO05D004924 1.7e-77 293.9 312 52.2
Glyma.03G252300 Glycine max HOM05D003193 ORTHO05D004924 1.7e-77 293.9 306 52.6
Haze_04476 Corylus avellana HOM05D003193 ORTHO05D004924 3.0e-77 293.1 323 50.8
Migut.F02049 Erythranthe guttata HOM05D003193 ORTHO05D004924 3.0e-77 293.1 306 50.3
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 5.1e-77 292.4 307 49.8
Medtr7g116425 Medicago truncatula HOM05D003193 ORTHO05D004924 6.6e-77 292.0 325 50.5
CAN.G131.15 Capsicum annuum HOM05D003193 ORTHO05D004924 1.1e-76 291.2 305 49.5
FvH4_6g01410 Fragaria vesca HOM05D003193 ORTHO05D004924 1.1e-76 291.2 265 55.5
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea HOM05D003193 ORTHO05D004924 1.5e-76 290.8 312 52.2
THA.LOC104821587 Tarenaya hassleriana HOM05D003193 ORTHO05D004924 4.3e-76 289.3 310 48.7
Solyc04g050520.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 5.6e-76 288.9 306 49.0
Sopen04g021290 Solanum pennellii HOM05D003193 ORTHO05D004924 5.6e-76 288.9 306 48.7
BcaB05g23590 Brassica carinata HOM05D003193 ORTHO05D004924 1.2e-75 287.7 255 56.9
Psat0s4268g0040 Pisum sativum HOM05D003193 ORTHO05D004924 1.2e-75 287.7 325 48.9
CARHR056150 Cardamine hirsuta HOM05D003193 ORTHO05D004924 1.6e-75 287.3 256 57.4
PSO832G2952 Papaver somniferum HOM05D003193 ORTHO05D004924 2.8e-75 286.6 309 48.5
SpUn0003_0310 Schrenkiella parvula HOM05D003193 ORTHO05D004924 3.6e-75 286.2 310 49.0
C02p37720 Brassica napus HOM05D003193 ORTHO05D004924 4.7e-75 285.8 306 49.7
BolC2t09791H Brassica oleracea HOM05D003193 ORTHO05D004924 4.7e-75 285.8 306 49.7
Glyma.19G249900 Glycine max HOM05D003193 ORTHO05D004924 6.2e-75 285.4 306 51.0
PSO764G0333 Papaver somniferum HOM05D003193 ORTHO05D004924 1.1e-74 284.6 309 48.2
PGR004G2196 Punica granatum HOM05D003193 ORTHO05D004924 1.1e-74 284.6 306 50.7
FAN14G4461 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.4e-74 284.3 275 53.8
FAN14G5315 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.4e-74 284.3 275 53.8
AT1G64790 Arabidopsis thaliana HOM05D003193 ORTHO05D004924 1.8e-74 283.9 310 49.0
Thhalv10022486m.g Eutrema salsugineum HOM05D003193 ORTHO05D004924 1.8e-74 283.9 306 49.3
FAN09G1546 Fragaria x ananassa HOM05D003193 ORTHO05D004924 3.1e-74 283.1 278 53.2
A02p23930 Brassica napus HOM05D003193 ORTHO05D004924 5.2e-74 282.3 306 49.0
BraA02t07385Z Brassica rapa HOM05D003193 ORTHO05D004924 5.2e-74 282.3 306 49.0
Rhsim05G0170000 Rhododendron simsii HOM05D003193 ORTHO05D004924 6.8e-74 282.0 320 47.5
Lj2A47G48 Lonicera japonica HOM05D003193 ORTHO05D004924 8.9e-74 281.6 265 52.1
BcaC03g16020 Brassica carinata HOM05D003193 ORTHO05D004924 1.2e-73 281.2 306 49.3
Cc09_g03080 Coffea canephora HOM05D003193 ORTHO05D004924 1.5e-73 280.8 306 48.4
Sed0015322 Sechium edule HOM05D003193 ORTHO05D004924 1.5e-73 280.8 307 48.5
SalBow1G5750 Salvia bowleyana HOM05D003193 ORTHO05D004924 2.6e-73 280.0 306 48.0
AL2G19160 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 3.4e-73 279.6 310 48.7
Carub.0012s0016 Capsella rubella HOM05D003193 ORTHO05D004924 3.4e-73 279.6 256 55.1
Nitab4.5_0001498g0050 Nicotiana tabacum HOM05D003193 ORTHO05D004924 9.9e-73 278.1 337 45.1
Phvul.006G107000 Phaseolus vulgaris HOM05D003193 ORTHO05D004924 9.9e-73 278.1 306 50.3
Aqoxy5G00090 Aquilegia oxysepala HOM05D003193 ORTHO05D004924 1.3e-72 277.7 306 49.0
DCAR_029994 Daucus carota HOM05D003193 ORTHO05D004924 1.3e-72 277.7 309 46.9
Nn1g03055 Nelumbo nucifera HOM05D003193 ORTHO05D004924 1.3e-72 277.7 306 46.4
CSS0037513 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 1.7e-72 277.3 309 49.5
Aa31LG2G2030 Aethionema arabicum HOM05D003193 ORTHO05D004924 6.4e-72 275.4 320 49.4
MBI07_g08903_MAGBIO Magnolia biondii HOM05D003193 ORTHO05D004924 1.1e-71 274.6 305 47.5
Peaxi162Scf00071g02610 Petunia axillaris HOM05D003193 ORTHO05D004924 1.1e-71 274.6 306 47.7
Lsat_1_v5_gn_9_45981 Lactuca sativa HOM05D003193 ORTHO05D004924 1.9e-71 273.9 306 48.4
ECA232G1705 Erigeron canadensis HOM05D003193 ORTHO05D004924 4.1e-71 272.7 306 45.4
Hund28419 Selenicereus undatus HOM05D003193 ORTHO05D004924 7.1e-71 271.9 309 48.2
Hund28421 Selenicereus undatus HOM05D003193 ORTHO05D004924 7.1e-71 271.9 309 48.2
Nitab4.5_0002063g0040 Nicotiana tabacum HOM05D003193 ORTHO05D004924 1.2e-70 271.2 354 42.7
Sc09g0001810 Simmondsia chinensis HOM05D003193 ORTHO05D004924 1.2e-70 271.2 309 47.2
vmacro19973 Vaccinium macrocarpon HOM05D003193 ORTHO05D004924 1.2e-70 271.2 257 52.5
HanXRQChr05g0145131 Helianthus annuus HOM05D003193 ORTHO05D004924 1.6e-70 270.8 306 47.4
VMungo0540G1922 Vigna mungo HOM05D003193 ORTHO05D004924 1.0e-69 268.1 306 48.4
SGA_v2.0_scaffold62G21472 Striga asiatica HOM05D003193 ORTHO05D004924 3.3e-68 263.1 306 46.1
AUR62006993 Chenopodium quinoa HOM05D003193 ORTHO05D004924 6.2e-67 258.8 256 51.2
HPP92_001295 Vanilla planifolia HOM05D003193 ORTHO05D004924 4.0e-66 256.1 308 44.5
EL10Ac4g09775 Beta vulgaris HOM05D003193 ORTHO05D004924 5.2e-66 255.8 309 45.0
AUR62000638 Chenopodium quinoa HOM05D003193 ORTHO05D004924 5.2e-66 255.8 255 50.6
ATR0787G183 Amborella trichopoda HOM05D003193 ORTHO05D004924 1.5e-65 254.2 272 47.4
Zm00001eb055550 Zea mays HOM05D003193 ORTHO05D004924 4.4e-65 252.7 250 52.0
Cpa.g.sc51.22 Carica papaya HOM05D003193 ORTHO05D004924 1.4e-63 247.7 307 45.6
CDE09G0882 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 1.0e-61 241.5 308 43.2
SEGI_25764 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 2.4e-55 220.3 251 44.2
Mapoly0135s0025 Marchantia polymorpha HOM05D003193 ORTHO05D004924 3.9e-37 159.8 253 34.0
CBR_g28040 Chara braunii HOM05D003193 ORTHO05D004924 1.3e-35 154.8 278 36.3
unitig_37.g12281 Utricularia gibba HOM05D003193 ORTHO05D004924 5.9e-33 146.0 305 34.1
AagrBONN_evm.TU.Sc2ySwM_344.2455 Anthoceros agrestis HOM05D003193 ORTHO05D004924 1.3e-32 144.8 253 33.6
Pp3c22_8910 Physcomitrium patens HOM05D003193 ORTHO05D004924 2.7e-30 137.1 266 30.1
SMO356G0295 Selaginella moellendorffii HOM05D003193 ORTHO05D004924 6.5e-24 115.9 214 33.6
Actinidia06818 Actinidia chinensis HOM05D003193 ORTHO05D004924 3.6e-22 110.2 102 55.9
MD04G1234000 Malus domestica HOM05D003193 ORTHO05D004924 3.3e-20 103.6 170 39.4
Os02g0538400 Oryza sativa ssp. japonica HOM05D003193 ORTHO05D004924 5.5e-15 86.3 153 34.6
RcHm_v2.0_Chr5g0043171 Rosa chinensis HOM05D003193 ORTHO05D004924 1.8e-13 81.3 63 61.9
CSS0034895 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D016156 2.7e-06 57.4 83 47.0


User provided reference genes

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