Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15472 Sapria himalayana HOM05D001820 ORTHO05D001794 5.2e-48 194.1 102 100.0
Nitab4.5_0006772g0020 Nicotiana tabacum HOM05D001820 ORTHO05D001794 1.0e-11 73.6 42 81.0
Hma1.2p1_0628F.1_g191920 Hydrangea macrophylla HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
Lsat_1_v5_gn_9_4320 Lactuca sativa HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
Nitab4.5_0010775g0010 Nicotiana tabacum HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
Solyc09g064840.4 Solanum lycopersicum HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
Sopen09g026540 Solanum pennellii HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
TWI14G0480 Tripterygium wilfordii HOM05D001820 ORTHO05D001794 1.7e-11 72.8 43 76.7
Phvul.007G169500 Phaseolus vulgaris HOM05D001820 ORTHO05D001794 3.9e-11 71.6 43 76.7
Ca_08570_v3 Cicer arietinum L. HOM05D001820 ORTHO05D001794 1.1e-10 70.1 43 74.4
HanXRQChr10g0282941 Helianthus annuus HOM05D001820 ORTHO05D001794 1.1e-10 70.1 43 72.1
Aa31LG1G29530 Aethionema arabicum HOM05D001820 ORTHO05D001794 1.5e-10 69.7 42 76.2
HanXRQChr15g0466431 Helianthus annuus HOM05D001820 ORTHO05D001794 1.5e-10 69.7 43 74.4
Glyma.02G149200 Glycine max HOM05D001820 ORTHO05D001794 2.5e-10 68.9 43 76.7
Glyma.10G024500 Glycine max HOM05D001820 ORTHO05D001794 2.5e-10 68.9 43 76.7
Carub.0004s3084 Capsella rubella HOM05D001820 ORTHO05D001794 3.3e-10 68.6 43 72.1
Thhalv10001283m.g Eutrema salsugineum HOM05D001820 ORTHO05D001794 3.3e-10 68.6 43 72.1
Sp4g30050 Schrenkiella parvula HOM05D001820 ORTHO05D001794 3.3e-10 68.6 43 72.1
ECA247G0631 Erigeron canadensis HOM05D001820 ORTHO05D001794 5.6e-10 67.8 43 69.8
Manes.01G209750 Manihot esculenta HOM05D001820 ORTHO05D001794 5.6e-10 67.8 44 75.0
arahy.Tifrunner.gnm1.ann1.NMKW8D Arachis hypogaea HOM05D001820 ORTHO05D001794 7.3e-10 67.4 43 74.4
arahy.Tifrunner.gnm1.ann1.QR52SN Arachis hypogaea HOM05D001820 ORTHO05D001794 7.3e-10 67.4 43 74.4
Gohir.A11G121000 Gossypium hirsutum HOM05D001820 ORTHO05D001794 7.3e-10 67.4 43 72.1
Lalb_Chr25g0290251 Lupinus albus HOM05D001820 ORTHO05D001794 7.3e-10 67.4 45 75.6
Psat3g065520 Pisum sativum HOM05D001820 ORTHO05D001794 7.3e-10 67.4 43 72.1
EL10Ac7g17200 Beta vulgaris HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 72.1
A04p00310 Brassica napus HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
BraA04t15750Z Brassica rapa HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
CANSAT25G1595 Cannabis sativa HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
Cc01_g19750 Coffea canephora HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
Lalb_Chr21g0306551 Lupinus albus HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
Sc17g0003980 Simmondsia chinensis HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 74.4
TPR.G1561 Trifolium pratense HOM05D001820 ORTHO05D001794 9.5e-10 67.0 43 72.1
FvH4_2g23910 Fragaria vesca HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
FAN15G3564 Fragaria x ananassa HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
FAN24G1313 Fragaria x ananassa HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
MD11G1289400 Malus domestica HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
Peaxi162Scf00104g00014 Petunia axillaris HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 74.4
Prupe.8G244400 Prunus persica HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
RcHm_v2.0_Chr6g0291531 Rosa chinensis HOM05D001820 ORTHO05D001794 1.6e-09 66.2 43 72.1
Lj1g0004866 Lotus japonicus HOM05D001820 ORTHO05D001794 2.1e-09 65.9 43 76.7
ClCG09G006880 Citrullus lanatus HOM05D001820 ORTHO05D001794 3.6e-09 65.1 43 69.8
MD03G1268600 Malus domestica HOM05D001820 ORTHO05D001794 3.6e-09 65.1 43 72.1
Sed0023088 Sechium edule HOM05D001820 ORTHO05D001794 3.6e-09 65.1 43 69.8
SGA_v2.0_scaffold1G00451 Striga asiatica HOM05D001820 ORTHO05D001794 3.6e-09 65.1 43 72.1
MELO3C015858.2 Cucumis melo HOM05D001820 ORTHO05D001794 4.7e-09 64.7 43 69.8
CsaV3_7G028600 Cucumis sativus L. HOM05D001820 ORTHO05D001794 4.7e-09 64.7 43 69.8
FAN27G2081 Fragaria x ananassa HOM05D001820 ORTHO05D001794 4.7e-09 64.7 57 59.6
AL4G47730 Arabidopsis lyrata HOM05D001820 ORTHO05D001794 6.2e-09 64.3 43 67.4
CiPaw.08G103400 Carya illinoinensis HOM05D001820 ORTHO05D001794 6.2e-09 64.3 40 77.5
Migut.D00266 Erythranthe guttata HOM05D001820 ORTHO05D001794 6.2e-09 64.3 43 69.8
Eucgr.K03390 Eucalyptus grandis HOM05D001820 ORTHO05D001794 6.2e-09 64.3 43 72.1
Oeu006222.1 Olea europaea HOM05D001820 ORTHO05D001794 6.2e-09 64.3 43 69.8
Sed0026274 Sechium edule HOM05D001820 ORTHO05D001794 6.2e-09 64.3 43 69.8
TAR633G2578 Trochodendron aralioides HOM05D001820 ORTHO05D001794 6.2e-09 64.3 44 75.0
SGA_v2.0_scaffold11G05796 Striga asiatica HOM05D001820 ORTHO05D001794 1.1e-08 63.5 41 73.2
Actinidia24325 Actinidia chinensis HOM05D001820 ORTHO05D001794 1.4e-08 63.2 47 72.3
SalBow4G2723 Salvia bowleyana HOM05D001820 ORTHO05D001794 1.4e-08 63.2 41 73.2
TAR362G0640 Trochodendron aralioides HOM05D001820 ORTHO05D001794 1.4e-08 63.2 44 72.7
AT3G63070 Arabidopsis thaliana HOM05D001820 ORTHO05D001794 1.8e-08 62.8 42 69.0
Glyma.19G153900 Glycine max HOM05D001820 ORTHO05D001794 1.8e-08 62.8 43 67.4
CiPaw.07G094300 Carya illinoinensis HOM05D001820 ORTHO05D001794 2.3e-08 62.4 40 75.0
Rhsim13G0022600 Rhododendron simsii HOM05D001820 ORTHO05D001794 2.3e-08 62.4 46 65.2
Aqoxy2G03255 Aquilegia oxysepala HOM05D001820 ORTHO05D001794 3.1e-08 62.0 45 71.1
DCAR_018415 Daucus carota HOM05D001820 ORTHO05D001794 4.0e-08 61.6 43 65.1
Ah.15g091710 Amaranthus hybridus HOM05D001820 ORTHO05D001794 5.2e-08 61.2 43 67.4
BcaC02g10341 Brassica carinata HOM05D001820 ORTHO05D001794 5.2e-08 61.2 43 74.4
C04p30140 Brassica napus HOM05D001820 ORTHO05D001794 5.2e-08 61.2 43 74.4
BolC4t24546H Brassica oleracea HOM05D001820 ORTHO05D001794 5.2e-08 61.2 43 74.4
AT2G48160 Arabidopsis thaliana HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
AUR62036789 Chenopodium quinoa HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
COL.COLO4_09134 Corchorus olitorius HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
Duzib138G1050 Durio zibethinus HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
Gohir.A11G121200 Gossypium hirsutum HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
Gohir.D11G126300 Gossypium hirsutum HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
Gorai.007G135000 Gossypium raimondii HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
PGR044G0537 Punica granatum HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
Thecc.01G283200 Theobroma cacao HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 65.1
vmacro02551 Vaccinium macrocarpon HOM05D001820 ORTHO05D001794 8.9e-08 60.5 43 67.4
arahy.Tifrunner.gnm1.ann1.GCV2HW Arachis hypogaea HOM05D001820 ORTHO05D001794 1.2e-07 60.1 41 70.7
arahy.Tifrunner.gnm1.ann1.W4SY9V Arachis hypogaea HOM05D001820 ORTHO05D001794 1.2e-07 60.1 41 70.7
BcaC08g45258 Brassica carinata HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
BcaC08g45270 Brassica carinata HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
A07p26200 Brassica napus HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
C06p28580 Brassica napus HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
BolC6t38025H Brassica oleracea HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
BraA07t30265Z Brassica rapa HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
Oeu047883.1 Olea europaea HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
TWI59G1249 Tripterygium wilfordii HOM05D001820 ORTHO05D001794 1.2e-07 60.1 43 72.1
AL5G45890 Arabidopsis lyrata HOM05D001820 ORTHO05D001794 1.5e-07 59.7 45 66.7
BcaB02g07301 Brassica carinata HOM05D001820 ORTHO05D001794 2.6e-07 58.9 43 69.8
SMO361G0361 Selaginella moellendorffii HOM05D001820 ORTHO05D001794 2.6e-07 58.9 43 69.8
Duzib211G0341 Durio zibethinus HOM05D001820 ORTHO05D001794 3.4e-07 58.5 43 65.1
Manes.05G073700 Manihot esculenta HOM05D001820 ORTHO05D001794 3.4e-07 58.5 43 62.8
Aa31LG10G16900 Aethionema arabicum HOM05D001820 ORTHO05D001794 4.4e-07 58.2 43 65.1
Lj2A1177G35 Lonicera japonica HOM05D001820 ORTHO05D001794 4.4e-07 58.2 44 63.6
Lj5g0020963 Lotus japonicus HOM05D001820 ORTHO05D001794 4.4e-07 58.2 43 62.8
Medtr7g094580 Medicago truncatula HOM05D001820 ORTHO05D001794 4.4e-07 58.2 49 59.2
Gohir.D11G126100 Gossypium hirsutum HOM05D001820 ORTHO05D001794 5.8e-07 57.8 43 62.8
Gorai.007G134800 Gossypium raimondii HOM05D001820 ORTHO05D001794 5.8e-07 57.8 43 62.8
GSVIVG01011100001 Vitis vinifera HOM05D001820 ORTHO05D001794 5.8e-07 57.8 44 65.9
Potri.014G138700 Populus trichocarpa HOM05D001820 ORTHO05D001794 1.3e-06 56.6 44 65.9
Lalb_Chr02g0142881 Lupinus albus HOM05D001820 ORTHO05D001794 1.7e-06 56.2 43 60.5
Cfa006108 Carpinus fangiana HOM05D001820 ORTHO05D001794 2.2e-06 55.8 40 67.5
QL12p022452 Quercus lobata HOM05D001820 ORTHO05D001794 2.2e-06 55.8 40 67.5
CAN.G609.1 Capsicum annuum HOM05D001820 ORTHO05D001794 2.9e-06 55.5 29 82.8
Ca_09773_v3 Cicer arietinum L. HOM05D001820 ORTHO05D001794 4.9e-06 54.7 43 60.5
Migut.O00592 Erythranthe guttata HOM05D001820 ORTHO05D001794 4.9e-06 54.7 43 62.8
Medtr1g072580 Medicago truncatula HOM05D001820 ORTHO05D001794 4.9e-06 54.7 43 60.5
Sp5g00460 Schrenkiella parvula HOM05D001820 ORTHO05D001794 4.9e-06 54.7 43 62.8
CDE11G0880 Ceratophyllum demersum HOM05D001820 ORTHO05D001794 6.4e-06 54.3 44 56.8
Mapoly0187s0019 Marchantia polymorpha HOM05D001820 ORTHO05D001794 6.4e-06 54.3 47 57.4
Hund17939 Selenicereus undatus HOM05D001820 ORTHO05D001794 6.4e-06 54.3 44 61.4
ATR0626G100 Amborella trichopoda HOM05D001820 ORTHO05D001794 8.3e-06 53.9 43 62.8


User provided reference genes

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