Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 5.3e-91 337.8 187 100.0
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 3.2e-56 222.2 224 62.1
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 2.3e-54 216.1 213 61.5
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 7.0e-51 204.5 188 66.5
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 2.6e-45 186.0 190 62.6
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 1.3e-44 183.7 212 56.6
SHI37073 Sapria himalayana HOM05D007130 ORTHO05D002078 6.2e-31 138.3 180 47.8
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 8.0e-31 137.9 178 51.7
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 3.4e-29 132.5 226 40.3
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 7.0e-27 124.8 227 40.5
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 3.9e-25 119.0 215 41.4
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 6.6e-25 118.2 211 41.2
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 1.5e-24 117.1 215 40.5
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 2.1e-23 113.2 215 40.5
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 8.1e-23 111.3 213 39.4
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 2.3e-22 109.8 213 39.9
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 3.1e-22 109.4 213 39.0
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.4e-21 105.5 213 38.5
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 5.8e-21 105.1 213 38.5
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 5.8e-21 105.1 213 38.5
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 7.5e-21 104.8 213 36.6
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 9.8e-21 104.4 213 36.6
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 9.8e-21 104.4 213 36.6
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.1e-19 100.9 213 37.6
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 1.6e-18 97.1 204 36.3
SHI32253 Sapria himalayana HOM05D007130 ORTHO05D002078 7.8e-18 94.7 144 51.4
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.3e-17 94.0 231 32.5
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 1.7e-17 93.6 217 35.5
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 1.7e-17 93.6 203 34.5
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 8.6e-17 91.3 205 37.1
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 1.1e-16 90.9 221 32.6
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 1.5e-16 90.5 207 33.3
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 1.5e-16 90.5 207 33.3
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.5e-16 90.5 206 33.5
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 1.9e-16 90.1 221 33.0
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 2.5e-16 89.7 220 32.3
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 3.3e-16 89.4 164 44.5
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 4.3e-16 89.0 204 33.3
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 4.3e-16 89.0 204 32.8
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 7.3e-16 88.2 205 34.6
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 2.1e-15 86.7 204 31.4
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.1e-15 86.7 204 31.4
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 2.1e-15 86.7 207 32.9
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.8e-15 86.3 206 33.5
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 2.8e-15 86.3 219 31.5
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 4.7e-15 85.5 204 31.4
Ciclev10005290m.g Citrus clementina HOM05D007130 ORTHO05D002078 1.8e-14 83.6 163 36.8
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 2.3e-14 83.2 207 31.4
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 2.3e-14 83.2 207 32.4
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 3.1e-14 82.8 222 30.2
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 4.0e-14 82.4 205 31.7
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 4.0e-14 82.4 205 31.7
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 4.0e-14 82.4 205 31.7
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 4.0e-14 82.4 204 32.4
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 5.2e-14 82.0 204 31.9
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 5.2e-14 82.0 204 31.9
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 5.2e-14 82.0 204 31.9
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 8.9e-14 81.3 204 32.8
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 2.0e-13 80.1 204 31.4
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 2.0e-13 80.1 204 31.4
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 2.0e-13 80.1 204 31.4
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 3.4e-13 79.3 205 30.2
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 3.4e-13 79.3 205 30.2
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 3.4e-13 79.3 205 30.2
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 3.4e-13 79.3 205 30.2
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 7.6e-13 78.2 206 30.1
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 2.2e-12 76.6 206 30.1
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 2.4e-11 73.2 199 31.2
SHI31594 Sapria himalayana HOM05D007130 ORTHO05D002078 2.4e-11 73.2 48 77.1
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 3.2e-11 72.8 203 29.6
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 5.4e-11 72.0 179 35.2
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 9.2e-11 71.2 203 29.6
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 9.2e-11 71.2 201 30.3
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.2e-10 70.9 118 40.7
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 4.6e-10 68.9 217 27.6
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 1.3e-09 67.4 203 29.1
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 1.3e-09 67.4 203 29.1
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.7e-09 67.0 201 30.3
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 2.3e-09 66.6 203 29.1
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 3.0e-09 66.2 119 37.8
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 3.0e-09 66.2 119 37.8
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 6.6e-09 65.1 206 29.1
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 1.9e-08 63.5 200 31.0
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 4.3e-08 62.4 210 29.5
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 4.3e-08 62.4 197 29.4
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 9.6e-08 61.2 208 29.8
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 9.6e-08 61.2 208 29.8
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 6.2e-07 58.5 206 29.6
VMungo1215G2341 Vigna mungo HOM05D007130 ORTHO05D002078 6.2e-07 58.5 140 34.3
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 8.1e-07 58.2 199 31.2
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 4.0e-06 55.8 208 30.3


User provided reference genes

Program Settings