Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15093 Sapria himalayana HOM05D000004 ORTHO05D000002 9.9e-42 172.9 82 100.0
SHI11956 Sapria himalayana HOM05D001034 ORTHO05D000955 3.9e-30 134.4 81 74.1
SHI22220 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-24 115.9 100 60.0
SHI12100 Sapria himalayana HOM05D000004 ORTHO05D000002 4.2e-24 114.4 110 57.3
SHI01939 Sapria himalayana HOM05D000004 ORTHO05D000002 3.5e-23 111.3 105 55.2
SHI06870 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-22 109.4 81 67.9
SHI43946 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-22 108.2 74 74.3
SHI03397 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-20 102.8 98 55.1
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 2.1e-20 102.1 70 70.0
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-20 101.7 108 47.2
SHI33375 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-20 101.7 81 63.0
SHI29939 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-19 99.4 94 57.4
SHI24690 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-19 99.0 81 63.0
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-19 98.6 78 60.3
SHI27591 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-19 97.8 81 63.0
SHI27536 Sapria himalayana HOM05D000004 ORTHO05D000002 6.9e-19 97.1 79 64.6
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-18 95.9 108 45.4
Sopen02g010310 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-18 95.5 81 56.8
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-18 93.6 107 44.9
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-17 91.3 107 43.0
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-16 89.7 107 43.0
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-16 89.4 107 44.9
SHI26348 Sapria himalayana HOM05D000004 ORTHO05D370459 1.9e-16 89.0 76 63.2
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-16 87.8 107 41.1
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-16 87.8 107 41.1
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-16 87.8 107 41.1
CAN.G8386.1 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-16 87.8 107 41.1
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-16 87.8 107 41.1
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 5.5e-16 87.4 107 41.1
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-16 87.4 107 41.1
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-16 87.4 110 41.8
SHI10874 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-16 87.0 112 45.5
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 1.6e-15 85.9 104 43.3
Sopen02g009970 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-15 85.9 107 41.1
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 2.1e-15 85.5 103 41.7
Sopen02g009990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-15 85.5 107 41.1
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-15 85.5 107 41.1
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-15 84.7 110 40.0
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-15 84.7 102 43.1
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-15 84.7 110 41.8
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-15 84.3 104 41.3
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-15 83.6 107 39.3
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-14 83.2 104 40.4
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-14 83.2 107 40.2
Sopen02g010000 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-14 82.0 105 40.0
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 5.1e-14 80.9 104 42.3
Sopen02g011330 Solanum pennellii HOM05D000004 ORTHO05D008835 5.1e-14 80.9 107 38.3
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 5.1e-14 80.9 106 38.7
CAN.G2189.3 Capsicum annuum HOM05D000004 ORTHO05D000002 8.7e-14 80.1 107 38.3
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 8.7e-14 80.1 108 40.7
SHI06772 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-13 79.3 83 55.4
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 3.3e-13 78.2 108 38.9
Sopen02g007870 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-13 78.2 106 37.7
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 3.3e-13 78.2 103 38.8
Sopen05g012240 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-13 78.2 106 37.7
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 3.3e-13 78.2 106 37.7
Sopen11g012760 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-13 78.2 107 36.4
SHI35605 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-12 76.3 41 85.4
SHI25401 Sapria himalayana HOM05D000004 ORTHO05D000378 1.6e-12 75.9 60 61.7
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-12 75.1 104 37.5
Sopen07g008430 Solanum pennellii HOM05D000004 ORTHO05D000378 2.8e-12 75.1 73 43.8
SHI33647 Sapria himalayana HOM05D000004 ORTHO05D000002 3.7e-12 74.7 41 82.9
Sopen01g009130 Solanum pennellii HOM05D000691 ORTHO05D000378 6.2e-12 73.9 103 35.9
Sopen02g009980 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-12 73.9 109 36.7
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.2e-12 73.6 105 39.0
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 8.2e-12 73.6 104 38.5
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-12 73.6 106 38.7
SHI14323 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-11 73.2 41 80.5
FvH4_4g06701 Fragaria vesca HOM05D000004 ORTHO05D000378 1.4e-11 72.8 104 39.4
Sopen09g011920 Solanum pennellii HOM05D000691 ORTHO05D000378 1.4e-11 72.8 102 36.3
SHI25079 Sapria himalayana HOM05D017164 ORTHO05D000002 1.8e-11 72.4 46 71.7
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-11 72.4 104 37.5
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 3.1e-11 71.6 104 36.5
SHI34302 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-11 71.2 69 56.5
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-11 71.2 104 35.6
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-11 70.9 103 37.9
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.3e-11 70.9 106 35.8
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 5.3e-11 70.9 105 39.0
RcHm_v2.0_Chr2g0149861 Rosa chinensis HOM05D000004 ORTHO05D000002 5.3e-11 70.9 104 35.6
SHI10912 Sapria himalayana HOM05D000004 ORTHO05D008835 5.3e-11 70.9 41 75.6
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 6.9e-11 70.5 104 35.6
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-11 70.5 104 36.5
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 9.0e-11 70.1 104 35.6
Sp7g07400 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-10 69.7 101 36.6
Sopen02g008020 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-10 69.7 96 36.5
SHI32438 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-10 69.3 42 76.2
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 3.4e-10 68.2 104 35.6
SHI06336 Sapria himalayana HOM05D000004 ORTHO05D000378 4.5e-10 67.8 40 77.5
SHI08325 Sapria himalayana HOM05D000004 ORTHO05D000002 4.5e-10 67.8 41 75.6
SHI04459 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-09 66.6 69 53.6
SHI27205 Sapria himalayana HOM05D000004 ORTHO05D002065 1.3e-09 66.2 41 73.2
Sopen12g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 66.2 83 42.2
SHI14735 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-09 65.5 40 75.0
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-09 65.1 95 37.9
SHI32156 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-09 64.3 77 48.1
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-09 63.9 88 38.6
SHI20468 Sapria himalayana HOM05D000004 ORTHO05D000002 2.5e-08 62.0 41 70.7
SHI04757 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-08 61.6 37 78.4
SHI21564 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-08 61.6 41 70.7
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 3.2e-08 61.6 88 37.5
Sopen02g010150 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-08 60.8 92 37.0
Sopen08g009610 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-08 60.8 88 35.2
Sopen07g017210 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-08 60.1 80 41.2
SHI15566 Sapria himalayana HOM05D000472 ORTHO05D000344 1.2e-07 59.7 63 54.0
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-07 59.3 107 31.8
Sopen01g024770 Solanum pennellii HOM05D000691 ORTHO05D000378 2.1e-07 58.9 86 34.9
SHI32369 Sapria himalayana HOM05D000004 ORTHO05D000002 4.6e-07 57.8 35 71.4
SHI00778 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-07 57.4 35 74.3
Sopen04g016000 Solanum pennellii HOM05D000004 ORTHO05D000378 1.0e-06 56.6 45 53.3
SHI07763 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-06 55.8 42 59.5
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-06 55.8 106 31.1
Ah.14g081120 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.3e-06 55.5 37 67.6
SEGI_19024 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.3e-06 55.5 110 28.2
SEGI_25895 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.3e-06 55.5 110 30.0
Sopen02g008030 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-06 55.5 59 42.4
CAN.G38.32 Capsicum annuum HOM05D000004 ORTHO05D000002 3.0e-06 55.1 57 43.9
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-06 55.1 103 33.0
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-06 55.1 103 33.0
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-06 55.1 103 33.0
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-06 55.1 103 33.0
Sc17g0004620 Simmondsia chinensis HOM05D001091 ORTHO05D001020 3.0e-06 55.1 83 33.7
Sopen02g006390 Solanum pennellii HOM05D000041 ORTHO05D000378 3.0e-06 55.1 75 38.7
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 3.9e-06 54.7 83 37.3
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 3.9e-06 54.7 83 37.3
EL10As7g23738 Beta vulgaris HOM05D000004 ORTHO05D000002 3.9e-06 54.7 60 40.0
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.9e-06 54.7 106 32.1
SEGI_18102 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.1e-06 54.3 106 32.1
Sopen02g001860 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-06 54.3 38 52.6
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-06 54.3 34 67.6
Rhsim05G0156800 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.7e-06 53.9 106 29.2
SEGI_21588 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.7e-06 53.9 110 28.2
SEGI_25484 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.7e-06 53.9 110 28.2
SEGI_26954 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.7e-06 53.9 110 28.2
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-06 53.9 98 31.6
CAN.G15307.1 Capsicum annuum HOM05D000004 ORTHO05D000002 8.7e-06 53.5 41 51.2
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 8.7e-06 53.5 103 32.0
Sopen01g009890 Solanum pennellii HOM05D000004 ORTHO05D000378 8.7e-06 53.5 94 29.8
Sopen06g004640 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-06 53.5 57 42.1


User provided reference genes

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