Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14961 Sapria himalayana HOM05D000804 ORTHO05D005389 6.2e-34 146.7 67 100.0
Dinv43539 Davidia involucrata HOM05D000804 ORTHO05D005389 1.9e-19 98.6 61 72.1
SalBow4G2892 Salvia bowleyana HOM05D000804 ORTHO05D005389 1.3e-18 95.9 56 67.9
Actinidia21597 Actinidia chinensis HOM05D000804 ORTHO05D005389 2.1e-18 95.1 57 68.4
Manes.09G131500 Manihot esculenta HOM05D000804 ORTHO05D005389 3.6e-18 94.4 61 68.9
SGA_v2.0_scaffold4G02207 Striga asiatica HOM05D000804 ORTHO05D005389 3.6e-18 94.4 58 67.2
DCAR_029554 Daucus carota HOM05D000804 ORTHO05D005389 8.1e-18 93.2 62 67.7
SEGI_26274 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 1.1e-17 92.8 57 70.2
FAN01G2963 Fragaria x ananassa HOM05D000804 ORTHO05D005389 3.1e-17 91.3 56 66.1
HPP92_005382 Vanilla planifolia HOM05D000804 ORTHO05D005389 3.1e-17 91.3 58 67.2
Migut.N01690 Erythranthe guttata HOM05D000804 ORTHO05D005389 1.2e-16 89.4 52 67.3
CDE12G0352 Ceratophyllum demersum HOM05D000804 ORTHO05D005389 2.4e-14 81.6 56 58.9
Peaxi162Scf00592g00212 Petunia axillaris HOM05D000804 ORTHO05D005389 1.2e-13 79.3 60 61.7
THA.LOC104825451 Tarenaya hassleriana HOM05D000804 ORTHO05D005389 1.6e-13 79.0 66 60.6
AagrBONN_evm.TU.Sc2ySwM_117.1272 Anthoceros agrestis HOM05D000804 ORTHO05D005389 2.1e-13 78.6 56 62.5
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.3e-12 75.9 54 61.1
GSVIVG01011337001 Vitis vinifera HOM05D000804 ORTHO05D005389 3.9e-12 74.3 41 75.6
HPP92_005377 Vanilla planifolia HOM05D000804 ORTHO05D005389 5.1e-12 73.9 44 75.0
Cfa003676 Carpinus fangiana HOM05D000804 ORTHO05D005389 6.7e-12 73.6 42 76.2
CsaV3_2G011020 Cucumis sativus L. HOM05D000804 ORTHO05D005389 8.7e-12 73.2 43 74.4
Psat4g196240 Pisum sativum HOM05D000804 ORTHO05D005389 1.5e-11 72.4 40 75.0
Phvul.010G085900 Phaseolus vulgaris HOM05D000804 ORTHO05D005389 1.9e-11 72.0 41 75.6
Rhsim01G0134900 Rhododendron simsii HOM05D000804 ORTHO05D005389 2.5e-11 71.6 43 72.1
vmacro21110 Vaccinium macrocarpon HOM05D000804 ORTHO05D005389 4.3e-11 70.9 40 72.5
Glyma.03G021000 Glycine max HOM05D000804 ORTHO05D005389 7.4e-11 70.1 41 73.2
QL04p052206 Quercus lobata HOM05D000804 ORTHO05D005389 7.4e-11 70.1 40 80.0
Ca_23822_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 9.6e-11 69.7 40 72.5
Ca_23827_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 9.6e-11 69.7 40 72.5
Cc02_g26260 Coffea canephora HOM05D000804 ORTHO05D005389 1.3e-10 69.3 42 78.6
Medtr8g035620 Medicago truncatula HOM05D000804 ORTHO05D005389 1.6e-10 68.9 41 68.3
Sed0024810 Sechium edule HOM05D000804 ORTHO05D005389 1.6e-10 68.9 41 70.7
ECA248G3066 Erigeron canadensis HOM05D000804 ORTHO05D005389 2.8e-10 68.2 39 74.4
TPR.G30883 Trifolium pratense HOM05D000804 ORTHO05D005389 2.8e-10 68.2 41 70.7
CBR_g4474 Chara braunii HOM05D000804 ORTHO05D005389 3.7e-10 67.8 61 55.7
Gohir.D13G099900 Gossypium hirsutum HOM05D000804 ORTHO05D005389 4.8e-10 67.4 44 65.9
CSS0037336 Camellia sinensis var. sinensis HOM05D000804 ORTHO05D005389 6.2e-10 67.0 38 73.7
MELO3C020372.2 Cucumis melo HOM05D000804 ORTHO05D005389 8.2e-10 66.6 38 73.7
Gohir.A13G075600 Gossypium hirsutum HOM05D000804 ORTHO05D005389 8.2e-10 66.6 40 72.5
Prupe.2G098200 Prunus persica HOM05D000804 ORTHO05D005389 1.1e-09 66.2 39 69.2
Gorai.013G111900 Gossypium raimondii HOM05D000804 ORTHO05D005389 1.8e-09 65.5 40 70.0
Thecc.05G230500 Theobroma cacao HOM05D000804 ORTHO05D005389 1.8e-09 65.5 41 68.3
PSO063G5197 Papaver somniferum HOM05D000804 ORTHO05D005389 2.4e-09 65.1 39 71.8
MSTRG.4983 Avicennia marina HOM05D000804 ORTHO05D005389 3.1e-09 64.7 37 75.7
Zm00001eb378990 Zea mays HOM05D000804 ORTHO05D005389 3.1e-09 64.7 39 69.2
Aqoxy3G02136 Aquilegia oxysepala HOM05D000804 ORTHO05D005389 4.0e-09 64.3 37 73.0
Lsat_1_v5_gn_1_84561 Lactuca sativa HOM05D000804 ORTHO05D005389 5.3e-09 63.9 40 65.0
Lj3g0026096 Lotus japonicus HOM05D000804 ORTHO05D005389 9.0e-09 63.2 37 70.3
ATR0829G026 Amborella trichopoda HOM05D000804 ORTHO05D005389 1.2e-08 62.8 38 71.1
AUR62017553 Chenopodium quinoa HOM05D000804 ORTHO05D005389 2.0e-08 62.0 40 60.0
PGR083G1621 Punica granatum HOM05D000804 ORTHO05D005389 2.0e-08 62.0 38 71.1
CAN.G700.21 Capsicum annuum HOM05D000804 ORTHO05D005389 7.6e-08 60.1 38 63.2
arahy.Tifrunner.gnm1.ann1.00QVML Arachis hypogaea HOM05D000804 ORTHO05D005389 1.7e-07 58.9 34 70.6
arahy.Tifrunner.gnm1.ann1.A8SNFY Arachis hypogaea HOM05D000804 ORTHO05D005389 1.7e-07 58.9 34 70.6
Ah.02g110870 Amaranthus hybridus HOM05D000804 ORTHO05D005389 2.2e-07 58.5 38 60.5
Atru.chr2.1715 Acer truncatum HOM05D000804 ORTHO05D005389 2.9e-07 58.2 36 72.2
MD07G1077300 Malus domestica HOM05D000804 ORTHO05D005389 4.9e-07 57.4 32 75.0
Nn1g09657 Nelumbo nucifera HOM05D000804 ORTHO05D005389 4.9e-07 57.4 36 63.9
AUR62028598 Chenopodium quinoa HOM05D000804 ORTHO05D005389 8.4e-07 56.6 39 56.4
Cpa.g.sc73.84 Carica papaya HOM05D000804 ORTHO05D005389 1.1e-06 56.2 36 66.7
ClCG06G008140 Citrullus lanatus HOM05D000804 ORTHO05D005389 1.9e-06 55.5 31 74.2
Sabra19G0054400 Salix brachista HOM05D000804 ORTHO05D005389 2.5e-06 55.1 34 76.5
FAN06G2879 Fragaria x ananassa HOM05D000804 ORTHO05D005389 5.5e-06 53.9 34 61.8
SMO145G0113 Selaginella moellendorffii HOM05D000804 ORTHO05D005389 5.5e-06 53.9 38 63.2
Lj7C558T5 Lonicera japonica HOM05D000804 ORTHO05D005389 7.1e-06 53.5 32 65.6
TWI32G1345 Tripterygium wilfordii HOM05D000804 ORTHO05D005389 9.3e-06 53.1 31 77.4


User provided reference genes

Program Settings