Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14860 Sapria himalayana HOM05D007573 ORTHO05D009938 1.9e-87 325.9 168 100.0
Lalb_Chr19g0134301 Lupinus albus HOM05D007573 ORTHO05D009938 5.9e-09 65.1 55 56.4
Lalb_Chr03g0030571 Lupinus albus HOM05D007573 ORTHO05D009938 3.0e-08 62.8 43 60.5
Glyma.12G150700 Glycine max HOM05D007573 ORTHO05D009938 3.9e-08 62.4 44 61.4
Prupe.4G184300 Prunus persica HOM05D007573 ORTHO05D009938 5.0e-08 62.0 43 60.5
Aqoxy7G03752 Aquilegia oxysepala HOM05D007573 ORTHO05D009938 8.6e-08 61.2 55 54.5
VMungo1383G0060 Vigna mungo HOM05D007573 ORTHO05D009938 1.1e-07 60.8 44 59.1
FAN18G1355 Fragaria x ananassa HOM05D007573 ORTHO05D009938 1.9e-07 60.1 52 50.0
FAN18G3111 Fragaria x ananassa HOM05D007573 ORTHO05D009938 1.9e-07 60.1 52 50.0
Glyma.06G246700 Glycine max HOM05D007573 ORTHO05D009938 2.5e-07 59.7 43 60.5
Manes.03G112266 Manihot esculenta HOM05D007573 ORTHO05D009938 2.5e-07 59.7 43 58.1
Potri.001G402000 Populus trichocarpa HOM05D007573 ORTHO05D009938 2.5e-07 59.7 56 50.0
COL.COLO4_09423 Corchorus olitorius HOM05D007573 ORTHO05D009938 3.3e-07 59.3 43 58.1
FAN04G1519 Fragaria x ananassa HOM05D007573 ORTHO05D009938 3.3e-07 59.3 43 55.8
CANSAT54G1030 Cannabis sativa HOM05D007573 ORTHO05D009938 7.3e-07 58.2 43 55.8
CiPaw.08G146300 Carya illinoinensis HOM05D007573 ORTHO05D009938 7.3e-07 58.2 53 52.8
Hma1.2p1_0540F.1_g174720 Hydrangea macrophylla HOM05D007573 ORTHO05D009938 7.3e-07 58.2 43 60.5
Hma1.2p1_0540F.1_g174725 Hydrangea macrophylla HOM05D007573 ORTHO05D009938 7.3e-07 58.2 43 60.5
RcHm_v2.0_Chr5g0034341 Rosa chinensis HOM05D007573 ORTHO05D009938 7.3e-07 58.2 43 55.8
Cc06_g21640 Coffea canephora HOM05D007573 ORTHO05D009938 9.5e-07 57.8 45 57.8
Haze_09458 Corylus avellana HOM05D007573 ORTHO05D009938 9.5e-07 57.8 43 55.8
Phvul.011G213100 Phaseolus vulgaris HOM05D007573 ORTHO05D009938 9.5e-07 57.8 43 58.1
Dinv08308 Davidia involucrata HOM05D007573 ORTHO05D009938 1.2e-06 57.4 59 50.8
Psat4g143240 Pisum sativum HOM05D007573 ORTHO05D009938 1.2e-06 57.4 43 53.5
ATR0751G258 Amborella trichopoda HOM05D007573 ORTHO05D009938 1.6e-06 57.0 58 46.6
Cpa.g.sc80.44 Carica papaya HOM05D007573 ORTHO05D009938 1.6e-06 57.0 60 48.3
Duzib213G0732 Durio zibethinus HOM05D007573 ORTHO05D009938 1.6e-06 57.0 60 46.7
Medtr8g043400 Medicago truncatula HOM05D007573 ORTHO05D009938 1.6e-06 57.0 55 49.1
CDE03G0215 Ceratophyllum demersum HOM05D001610 ORTHO05D001585 2.1e-06 56.6 45 55.6
Dinv04316 Davidia involucrata HOM05D007573 ORTHO05D009938 2.8e-06 56.2 43 53.5
Gohir.A01G065200 Gossypium hirsutum HOM05D007573 ORTHO05D009938 2.8e-06 56.2 43 55.8
Gorai.002G072400 Gossypium raimondii HOM05D007573 ORTHO05D009938 2.8e-06 56.2 43 55.8
Nn8g41073 Nelumbo nucifera HOM05D007573 ORTHO05D009938 2.8e-06 56.2 59 49.2
Ciclev10010140m.g Citrus clementina HOM05D007573 ORTHO05D009938 3.6e-06 55.8 43 51.2
MELO3C016521.2 Cucumis melo HOM05D007573 ORTHO05D009938 4.7e-06 55.5 51 43.1
CsaV3_3G006210 Cucumis sativus L. HOM05D007573 ORTHO05D009938 4.7e-06 55.5 51 43.1
Thecc.07G080300 Theobroma cacao HOM05D007573 ORTHO05D009938 4.7e-06 55.5 43 53.5
Aa31LG8G2630 Aethionema arabicum HOM05D007573 ORTHO05D009938 8.0e-06 54.7 43 53.5
MD00G1089500 Malus domestica HOM05D007573 ORTHO05D009938 8.0e-06 54.7 45 51.1
Sed0027924 Sechium edule HOM05D007573 ORTHO05D009938 8.0e-06 54.7 66 39.4


User provided reference genes

Program Settings