Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14852 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-83 312.8 160 100.0
SHI22323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-35 153.3 154 56.5
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-31 137.5 245 38.8
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-28 129.8 94 69.1
SHI04707 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-28 128.6 74 82.4
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 4.2e-28 128.6 118 60.2
SHI19157 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-28 128.6 100 68.0
SHI35127 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-28 128.3 74 83.8
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-28 127.9 94 68.1
SHI12496 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-28 127.9 79 78.5
SHI07165 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-27 125.2 94 68.1
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-27 124.8 95 65.3
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-27 124.4 94 67.0
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-27 124.4 94 66.0
SHI45230 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-26 124.0 94 67.0
SHI28427 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-25 119.8 110 59.1
SHI11980 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-25 118.6 74 78.4
SHI20709 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-24 114.8 119 54.6
SHI27648 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-23 112.8 74 73.0
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-23 111.3 70 77.1
SHI26117 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-21 105.5 59 83.1
SHI04724 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-21 105.1 74 68.9
SHI38274 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-21 105.1 67 77.6
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-19 100.5 57 80.7
TPR.G40229 Trifolium pratense HOM05D000002 ORTHO05D000001 2.1e-19 99.8 74 63.5
SHI41774 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.1 55 78.2
SHI41798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.1 55 78.2
SHI19883 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-16 89.4 67 64.2
VMungo0464G0952 Vigna mungo HOM05D000002 ORTHO05D000001 2.8e-16 89.4 72 61.1
CANSAT80G1830 Cannabis sativa HOM05D000002 ORTHO05D000001 6.2e-16 88.2 70 54.3
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-15 86.7 71 54.9
SHI02997 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-15 86.3 266 29.3
PSO339G0080 Papaver somniferum HOM05D000002 ORTHO05D000001 6.9e-15 84.7 78 50.0
SHI37535 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-14 82.4 78 56.4
SHI25860 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-13 78.6 89 50.6
SHI02929 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 77.0 86 51.2
SHI03311 Sapria himalayana HOM05D030947 ORTHO05D000001 1.4e-12 77.0 41 78.0
SHI22961 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 77.0 77 54.5
SHI18860 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-12 76.3 79 53.2
SHI45229 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-12 76.3 84 51.2
SHI10555 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-12 75.9 79 51.9
SHI21150 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-12 75.1 86 48.8
SHI05086 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-12 74.7 82 52.4
SHI18218 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-11 72.8 51 76.5
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-11 72.8 97 47.4
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 3.5e-11 72.4 68 51.5
TPR.G8649 Trifolium pratense HOM05D000002 ORTHO05D000001 6.1e-11 71.6 66 54.5
Hma1.2p1_0279F.1_g112030 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 7.9e-11 71.2 67 49.3
SHI14662 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-11 71.2 85 48.2
SHI31472 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-11 71.2 110 41.8
SHI44368 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-10 70.9 82 51.2
SHI44612 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-10 70.9 82 51.2
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 70.5 82 50.0
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-10 69.7 86 46.5
MSTRG.5281 Avicennia marina HOM05D000002 ORTHO05D000001 5.1e-10 68.6 50 62.0
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-10 68.6 84 47.6
SHI53339 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-10 68.2 40 80.0
SHI28481 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-10 67.8 94 42.6
SHI29906 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-10 67.8 88 48.9
THA.LOC104800056 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.7e-10 67.8 67 50.7
Hma1.2p1_0296F.1_g116930 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-09 67.0 60 48.3
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 67.0 99 44.4
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-09 66.2 96 43.8
SHI27649 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 65.9 85 45.9
PSO541G3278 Papaver somniferum HOM05D000002 ORTHO05D000001 5.7e-09 65.1 68 47.1
AUR62009290 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.7e-09 64.3 72 45.8
PSO455G0019 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-08 63.5 86 38.4
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-08 63.5 64 40.6
SHI17313 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.5 68 52.9
SHI19155 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.5 34 85.3
RcHm_v2.0_Chr5g0064041 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-08 63.2 64 39.1
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-08 63.2 90 37.8
PSO063G7113 Papaver somniferum HOM05D000002 ORTHO05D000001 2.8e-08 62.8 107 33.6
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.8 90 37.8
SHI00870 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-08 62.8 61 54.1
AUR62037666 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.7e-08 62.4 88 38.6
Hma1.2p1_0017F.1_g011950 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-08 62.4 60 43.3
Sabra13G0054700 Salix brachista HOM05D000002 ORTHO05D011000 4.8e-08 62.0 73 41.1
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-08 62.0 77 45.5
SHI03800 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-08 62.0 40 75.0
SHI13793 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-08 62.0 54 59.3
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.8 72 48.6
MSTRG.2296 Avicennia marina HOM05D000002 ORTHO05D000001 1.4e-07 60.5 48 56.2
SHI02950 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 60.5 37 78.4
CSS0036759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-07 60.1 70 41.4
FvH4_3g06912 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-07 60.1 64 37.5
SHI07166 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 60.1 66 48.5
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 2.4e-07 59.7 50 54.0
SHI05498 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 59.7 70 51.4
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-07 59.3 64 43.8
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 59.3 72 47.2
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.9 64 43.8
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.9 64 43.8
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.9 58 44.8
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 4.1e-07 58.9 94 36.2
PSO223G0072 Papaver somniferum HOM05D000002 ORTHO05D000001 4.1e-07 58.9 59 45.8
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-07 58.9 72 48.6
Sopen10g007410 Solanum pennellii HOM05D000002 ORTHO05D000001 6.9e-07 58.2 58 50.0
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-07 57.8 93 34.4
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-07 57.8 70 38.6
AUR62030420 Chenopodium quinoa HOM05D002321 ORTHO05D007292 9.0e-07 57.8 70 44.3
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 9.0e-07 57.8 64 35.9
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-07 57.8 74 48.6
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.2e-06 57.4 68 36.8
SHI10319 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 57.4 37 67.6
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 57.4 91 40.7
SHI30449 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 57.4 52 59.6
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 64 42.2
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-06 57.0 64 43.8
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-06 57.0 64 43.8
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.0 72 47.2
Ca_24102_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-06 56.6 71 40.8
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-06 56.6 73 45.2
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-06 56.6 91 37.4
THA.LOC104803123 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-06 56.6 72 37.5
SHI27033 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 56.2 73 42.5
SHI32854 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 56.2 43 69.8
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-06 55.8 64 42.2
CSS0032569 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-06 55.8 64 42.2
PSO541G3919 Papaver somniferum HOM05D000002 ORTHO05D000001 3.4e-06 55.8 55 45.5
SHI37747 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 55.8 30 86.7
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 50 48.0
CSS0042948 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 64 43.8
Gohir.A12G052250 Gossypium hirsutum HOM05D000002 ORTHO05D000001 4.5e-06 55.5 80 35.0
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 5.9e-06 55.1 70 38.6
PSO339G3014 Papaver somniferum HOM05D000002 ORTHO05D000001 5.9e-06 55.1 90 33.3
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.9e-06 55.1 67 43.3
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.9e-06 55.1 92 32.6
CSS0028411 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 76 38.2
AUR62032455 Chenopodium quinoa HOM05D001007 ORTHO05D000001 7.7e-06 54.7 36 55.6
AUR62032456 Chenopodium quinoa HOM05D001007 ORTHO05D000001 7.7e-06 54.7 36 55.6
ECA236G4471 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 63 44.4
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 65 41.5
SHI22656 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-06 54.7 38 73.7
Sopen10g017070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-05 54.3 94 31.9


User provided reference genes

Program Settings