Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14839 Sapria himalayana HOM05D000616 ORTHO05D000233 5.9e-82 307.4 143 100.0
SHI38698 Sapria himalayana HOM05D000616 ORTHO05D000233 3.6e-31 138.7 99 72.7
SHI14904 Sapria himalayana HOM05D000616 ORTHO05D000233 6.1e-31 137.9 84 81.0
SHI02431 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-30 137.1 73 89.0
SHI22978 Sapria himalayana HOM05D000616 ORTHO05D000233 4.4e-29 131.7 98 72.4
SHI19610 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-27 125.9 65 89.2
SHI29962 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-26 123.2 89 70.8
SHI06731 Sapria himalayana HOM05D007110 ORTHO05D000233 2.3e-25 119.4 76 73.7
SHI29099 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-24 116.7 80 72.5
SHI19528 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-24 116.3 56 94.6
SHI43638 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-24 116.3 56 94.6
SHI43952 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-24 116.3 56 94.6
SHI36792 Sapria himalayana HOM05D000616 ORTHO05D000062 2.5e-24 115.9 56 94.6
SHI36746 Sapria himalayana HOM05D000616 ORTHO05D000233 6.2e-23 111.3 58 87.9
SHI14858 Sapria himalayana HOM05D000616 ORTHO05D000233 3.1e-22 109.0 75 72.0
SHI42493 Sapria himalayana HOM05D000616 ORTHO05D000233 4.0e-22 108.6 53 90.6
SHI22555 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-22 108.2 56 85.7
SHI35917 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-22 108.2 53 90.6
SHI38771 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-22 108.2 54 90.7
SHI00755 Sapria himalayana HOM05D000616 ORTHO05D000233 6.8e-22 107.8 55 85.5
SHI37661 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-21 107.1 54 88.9
SHI14115 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-21 105.9 55 85.5
SHI25573 Sapria himalayana HOM05D000616 ORTHO05D000233 2.2e-20 102.8 53 86.8
SHI14002 Sapria himalayana HOM05D000616 ORTHO05D000233 3.7e-20 102.1 54 81.5
SHI19985 Sapria himalayana HOM05D000616 ORTHO05D000233 3.7e-20 102.1 55 81.8
SHI42234 Sapria himalayana HOM05D000616 ORTHO05D000233 4.9e-20 101.7 50 90.0
SHI07772 Sapria himalayana HOM05D000616 ORTHO05D000233 6.4e-20 101.3 83 63.9
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 8.3e-20 100.9 53 90.6
SHI39548 Sapria himalayana HOM05D000616 ORTHO05D000233 8.3e-20 100.9 49 91.8
SHI27548 Sapria himalayana HOM05D000616 ORTHO05D000233 4.1e-19 98.6 61 75.4
SHI45820 Sapria himalayana HOM05D000616 ORTHO05D000233 5.4e-19 98.2 53 84.9
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-18 96.3 46 91.3
SHI07450 Sapria himalayana HOM05D000616 ORTHO05D000233 1.7e-17 93.2 46 87.0
SHI20637 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-17 92.8 48 85.4
SHI22834 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-17 92.4 75 60.0
SHI07672 Sapria himalayana HOM05D000616 ORTHO05D000233 6.6e-17 91.3 45 88.9
SHI46841 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-16 88.2 49 81.6
SHI28225 Sapria himalayana HOM05D000105 ORTHO05D000233 1.6e-15 86.7 104 51.0
SHI03876 Sapria himalayana HOM05D000616 ORTHO05D000233 8.1e-15 84.3 106 48.1
SHI19643 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-14 84.0 82 56.1
SHI34870 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-14 83.6 44 88.6
SHI40064 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-14 81.6 119 41.2
SHI03434 Sapria himalayana HOM05D003883 ORTHO05D004605 6.8e-14 81.3 47 78.7
SHI36851 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-13 80.5 58 72.4
SHI14345 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-13 79.7 59 66.1
SHI38313 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-13 79.7 77 53.2
SHI27619 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-13 79.3 40 90.0
SHI37176 Sapria himalayana HOM05D000616 ORTHO05D000233 7.5e-13 77.8 79 54.4
SHI41831 Sapria himalayana HOM05D000616 ORTHO05D000233 9.9e-13 77.4 68 60.3
SHI12835 Sapria himalayana HOM05D000616 ORTHO05D000233 4.9e-12 75.1 45 73.3
SHI35894 Sapria himalayana HOM05D000616 ORTHO05D000233 4.9e-12 75.1 72 59.7
SHI07212 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-11 73.2 95 45.3
SHI28342 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-11 72.8 81 55.6
SHI01053 Sapria himalayana HOM05D000616 ORTHO05D000233 4.1e-11 72.0 37 89.2
SHI17933 Sapria himalayana HOM05D000616 ORTHO05D000233 5.4e-11 71.6 69 59.4
SHI14248 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-11 71.2 111 45.9
SHI37724 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-10 70.5 69 59.4
Atru.chr1.522 Acer truncatum HOM05D000539 ORTHO05D000592 1.6e-10 70.1 70 45.7
Ciclev10012877m.g Citrus clementina HOM05D000539 ORTHO05D000592 1.6e-10 70.1 59 50.8
SHI09962 Sapria himalayana HOM05D000616 ORTHO05D000233 2.7e-10 69.3 41 75.6
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 2.7e-10 69.3 101 41.6
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.6e-10 68.6 52 53.8
SHI15198 Sapria himalayana HOM05D000616 ORTHO05D000233 4.6e-10 68.6 31 93.5
SHI32454 Sapria himalayana HOM05D000616 ORTHO05D000233 4.6e-10 68.6 31 96.8
SHI36797 Sapria himalayana HOM05D000616 ORTHO05D000233 4.6e-10 68.6 43 69.8
Rhsim05G0213000 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.8e-10 67.8 53 52.8
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-10 67.8 52 53.8
SHI07735 Sapria himalayana HOM05D000616 ORTHO05D000233 7.8e-10 67.8 32 90.6
SHI10686 Sapria himalayana HOM05D000616 ORTHO05D000233 7.8e-10 67.8 34 88.2
SHI22002 Sapria himalayana HOM05D000616 ORTHO05D000233 7.8e-10 67.8 102 45.1
SHI17347 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-09 67.4 41 75.6
Atru.chr6.155 Acer truncatum HOM05D000539 ORTHO05D000592 1.3e-09 67.0 49 55.1
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 1.3e-09 67.0 52 59.6
Atru.chr7.1246 Acer truncatum HOM05D000539 ORTHO05D000592 1.7e-09 66.6 51 54.9
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.7e-09 66.6 69 47.8
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.7e-09 66.6 69 47.8
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.7e-09 66.6 69 47.8
RhsimUnG0040200 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.7e-09 66.6 69 47.8
SHI04630 Sapria himalayana HOM05D000616 ORTHO05D000233 3.9e-09 65.5 41 73.2
SHI36553 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-09 65.1 32 87.5
Sed0025775 Sechium edule HOM05D007110 ORTHO05D000592 6.6e-09 64.7 65 53.8
SHI07271 Sapria himalayana HOM05D000616 ORTHO05D000233 8.6e-09 64.3 57 57.9
SHI25030 Sapria himalayana HOM05D000616 ORTHO05D000233 8.6e-09 64.3 41 70.7
CANSAT35G0077 Cannabis sativa HOM05D000539 ORTHO05D000592 1.1e-08 63.9 54 50.0
CANSAT64G2767 Cannabis sativa HOM05D000539 ORTHO05D000592 1.1e-08 63.9 54 50.0
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 1.5e-08 63.5 52 57.7
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.9e-08 63.2 52 50.0
SHI09965 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-08 63.2 80 48.8
SHI38597 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-08 63.2 32 87.5
SHI38732 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-08 63.2 32 87.5
MD01G1047900 Malus domestica HOM05D000539 ORTHO05D000592 2.5e-08 62.8 52 50.0
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.5e-08 62.8 73 42.5
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.5e-08 62.8 73 42.5
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-08 62.8 67 43.3
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-08 62.8 67 43.3
SHI34222 Sapria himalayana HOM05D000616 ORTHO05D000233 2.5e-08 62.8 34 82.4
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.3e-08 62.4 72 43.1
SHI17190 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-08 62.4 31 90.3
SHI20508 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-08 62.4 53 60.4
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 4.3e-08 62.0 53 47.2
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 5.6e-08 61.6 52 50.0
SHI39511 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-08 61.6 34 85.3
Ciclev10005682m.g Citrus clementina HOM05D000539 ORTHO05D000592 7.3e-08 61.2 50 50.0
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 7.3e-08 61.2 52 57.7
Sed0014210 Sechium edule HOM05D007110 ORTHO05D000592 7.3e-08 61.2 51 58.8
Ciclev10003431m.g Citrus clementina HOM05D000539 ORTHO05D000233 9.5e-08 60.8 50 54.0
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.5e-08 60.8 72 43.1
SHI27858 Sapria himalayana HOM05D000616 ORTHO05D000233 9.5e-08 60.8 75 52.0
MELO3C034193.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-07 60.5 79 32.9
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 1.2e-07 60.5 76 39.5
SHI23123 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-07 60.5 35 80.0
SHI30459 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-07 60.5 31 87.1
Prupe.3G118800 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-07 60.1 79 41.8
SHI18457 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-07 60.1 35 77.1
SHI20012 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-07 59.7 33 81.8
SHI13261 Sapria himalayana HOM05D000616 ORTHO05D000233 2.8e-07 59.3 32 84.4
SHI32566 Sapria himalayana HOM05D000616 ORTHO05D000233 2.8e-07 59.3 76 46.1
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 3.6e-07 58.9 46 52.2
MELO3C033140.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.6e-07 58.9 79 31.6
Prupe.1G028600 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.1G184100 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.1G185000 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.1G199400 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.2G011100 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.2G053400 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 4.7e-07 58.5 79 40.5
Prupe.2G157500 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.3G119600 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.3G153900 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 4.7e-07 58.5 79 40.5
Prupe.6G142900 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.7G008900 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 4.7e-07 58.5 79 40.5
SHI01499 Sapria himalayana HOM05D000616 ORTHO05D000233 4.7e-07 58.5 32 78.1
SHI13269 Sapria himalayana HOM05D003883 ORTHO05D004605 4.7e-07 58.5 59 61.0
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 6.2e-07 58.2 52 46.2
MELO3C031430.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.1e-07 57.8 57 42.1
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.1e-07 57.8 57 40.4
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 8.1e-07 57.8 87 36.8
Prupe.5G051700 Prunus persica HOM05D000539 ORTHO05D000592 8.1e-07 57.8 87 36.8
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 8.1e-07 57.8 87 36.8
Prupe.7G057400 Prunus persica HOM05D000539 ORTHO05D000592 8.1e-07 57.8 79 39.2
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 8.1e-07 57.8 65 46.2
RcHm_v2.0_Chr6g0261571 Rosa chinensis HOM05D000539 ORTHO05D000592 8.1e-07 57.8 55 50.9
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 8.1e-07 57.8 108 40.7
MELO3C028238.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-06 57.4 74 36.5
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-06 57.4 57 40.4
Prupe.4G092400 Prunus persica HOM05D000539 ORTHO05D000592 1.1e-06 57.4 74 44.6
Prupe.4G253500 Prunus persica HOM05D000539 ORTHO05D000592 1.1e-06 57.4 79 40.5
SHI28596 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-06 57.4 38 71.1
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-06 57.0 57 40.4
Prupe.8G059600 Prunus persica HOM05D000539 ORTHO05D000592 1.4e-06 57.0 74 43.2
Rhsim05G0020800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.4e-06 57.0 61 47.5
SHI00496 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-06 57.0 68 47.1
SHI38690 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-06 57.0 50 56.0
Sed0014995 Sechium edule HOM05D000539 ORTHO05D000592 1.4e-06 57.0 76 35.5
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-06 56.6 52 42.3
MELO3C030650.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-06 56.6 54 48.1
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 1.8e-06 56.6 54 46.3
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 1.8e-06 56.6 54 46.3
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 1.8e-06 56.6 67 40.3
Sed0004440 Sechium edule HOM05D000539 ORTHO05D000592 1.8e-06 56.6 63 38.1
Sed0011271 Sechium edule HOM05D000539 ORTHO05D000592 1.8e-06 56.6 63 38.1
Sed0019579 Sechium edule HOM05D000539 ORTHO05D000592 1.8e-06 56.6 63 38.1
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 2.4e-06 56.2 53 45.3
Prupe.1G310400 Prunus persica HOM05D000539 ORTHO05D000592 2.4e-06 56.2 87 35.6
MELO3C027818.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.1e-06 55.8 52 42.3
MELO3C034746.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.1e-06 55.8 52 48.1
ECA240G4466 Erigeron canadensis HOM05D000539 ORTHO05D000233 3.1e-06 55.8 87 33.3
Prupe.1G173700 Prunus persica HOM05D000539 ORTHO05D000592 3.1e-06 55.8 60 45.0
Sed0025384 Sechium edule HOM05D007110 ORTHO05D000592 3.1e-06 55.8 52 51.9
MELO3C034519.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.0e-06 55.5 52 42.3
Lsat_1_v5_gn_4_88020 Lactuca sativa HOM05D000539 ORTHO05D000592 4.0e-06 55.5 69 34.8
Prupe.1G183700 Prunus persica HOM05D000539 ORTHO05D000592 4.0e-06 55.5 74 43.2
Prupe.2G062000 Prunus persica HOM05D000539 ORTHO05D000592 4.0e-06 55.5 64 43.8
Prupe.5G062900 Prunus persica HOM05D000539 ORTHO05D000592 4.0e-06 55.5 74 43.2
Prupe.7G033400 Prunus persica HOM05D000539 ORTHO05D000592 4.0e-06 55.5 74 40.5
Prupe.7G055100 Prunus persica HOM05D000539 ORTHO05D000233 4.0e-06 55.5 64 43.8
SHI31787 Sapria himalayana HOM05D000616 ORTHO05D000233 4.0e-06 55.5 30 86.7
ECA232G2064 Erigeron canadensis HOM05D000539 ORTHO05D000592 5.2e-06 55.1 55 43.6
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 5.2e-06 55.1 53 43.4
Prupe.4G261200 Prunus persica HOM05D000539 ORTHO05D000592 5.2e-06 55.1 74 43.2
SHI02902 Sapria himalayana HOM05D000616 ORTHO05D000233 5.2e-06 55.1 95 42.1
Sed0016665 Sechium edule HOM05D000539 ORTHO05D000592 5.2e-06 55.1 53 41.5
Sed0019626 Sechium edule HOM05D000539 ORTHO05D000592 5.2e-06 55.1 53 41.5
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.8e-06 54.7 62 38.7
MELO3C033511.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.8e-06 54.7 79 30.4
SHI35047 Sapria himalayana HOM05D000616 ORTHO05D000233 6.8e-06 54.7 31 77.4
Sed0000174 Sechium edule HOM05D000539 ORTHO05D000592 6.8e-06 54.7 63 36.5
MELO3C029201.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.9e-06 54.3 52 42.3
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.9e-06 54.3 52 40.4
MELO3C033823.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.9e-06 54.3 52 50.0
MELO3C034533.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.9e-06 54.3 79 31.6
SHI00302 Sapria himalayana HOM05D000616 ORTHO05D000233 8.9e-06 54.3 42 61.9


User provided reference genes

Program Settings