Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14716 Sapria himalayana HOM05D008105 ORTHO05D010309 2.8e-45 184.9 92 100.0
Nitab4.5_0012260g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 8.0e-16 87.0 144 39.6
Lsat_1_v5_gn_3_92260 Lactuca sativa HOM05D008105 ORTHO05D010309 6.3e-13 77.4 50 76.0
DCAR_024277 Daucus carota HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
DCAR_031801 Daucus carota HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
Lsat_1_v5_gn_7_25421 Lactuca sativa HOM05D008105 ORTHO05D010309 1.8e-12 75.9 68 55.9
Lsat_1_v5_gn_9_5080 Lactuca sativa HOM05D008105 ORTHO05D010309 1.8e-12 75.9 68 55.9
Nn1g10137 Nelumbo nucifera HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
Solyc10g048060.2 Solanum lycopersicum HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
PGSC0003DMG400019855 Solanum tuberosum HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
TPR.G40844 Trifolium pratense HOM05D008105 ORTHO05D010309 1.8e-12 75.9 42 81.0
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 2.4e-12 75.5 67 61.2
DCAR_028367 Daucus carota HOM05D008105 ORTHO05D010309 5.4e-12 74.3 36 91.7
SHI53302 Sapria himalayana HOM05D008105 ORTHO05D010309 5.4e-12 74.3 36 91.7
SGA_v2.0_scaffold255G45599 Striga asiatica HOM05D008105 ORTHO05D010309 5.4e-12 74.3 36 91.7
Lsat_1_v5_gn_0_34941 Lactuca sativa HOM05D008105 ORTHO05D010309 7.0e-12 73.9 40 82.5
Lsat_1_v5_gn_7_101141 Lactuca sativa HOM05D008105 ORTHO05D010309 7.0e-12 73.9 68 54.4
Nitab4.5_0006806g0130 Nicotiana tabacum HOM05D008105 ORTHO05D010309 7.0e-12 73.9 150 34.7
SHI46576 Sapria himalayana HOM05D008105 ORTHO05D010309 7.0e-12 73.9 36 91.7
SHI47522 Sapria himalayana HOM05D008105 ORTHO05D010309 7.0e-12 73.9 36 91.7
CsaV3_UNG208290 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.6e-11 72.8 36 88.9
CsaV3_UNG208900 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.6e-11 72.8 36 88.9
ATMG00030 Arabidopsis thaliana HOM05D008105 ORTHO05D010309 2.0e-11 72.4 36 88.9
BNapus_Darmor_BZH_scaffold_234p00090 Brassica napus HOM05D008105 ORTHO05D010309 2.0e-11 72.4 36 88.9
CARHR282600 Cardamine hirsuta HOM05D008105 ORTHO05D010309 2.0e-11 72.4 36 88.9
Nitab4.5_0000886g0210 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.0e-11 72.4 42 76.2
SHI54884 Sapria himalayana HOM05D008105 ORTHO05D010309 2.0e-11 72.4 36 88.9
arahy.Tifrunner.gnm1.ann1.CS557D Arachis hypogaea HOM05D008105 ORTHO05D010309 5.9e-11 70.9 36 86.1
Dinv06662 Davidia involucrata HOM05D008105 ORTHO05D010309 5.9e-11 70.9 32 96.9
Dinv06742 Davidia involucrata HOM05D008105 ORTHO05D010309 5.9e-11 70.9 32 96.9
Potri.007G062282 Populus trichocarpa HOM05D008105 ORTHO05D010309 7.8e-11 70.5 36 88.9
unitig_87.g27955 Utricularia gibba HOM05D008105 ORTHO05D010309 7.8e-11 70.5 42 76.2
GSVIVG01013601001 Vitis vinifera HOM05D008105 ORTHO05D010309 7.8e-11 70.5 36 88.9
Lsat_1_v5_gn_5_16381 Lactuca sativa HOM05D008105 ORTHO05D010309 1.3e-10 69.7 47 74.5
Nitab4.5_0006089g0080 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.3e-10 69.7 38 81.6
Migut.I00280 Erythranthe guttata HOM05D008105 ORTHO05D010309 1.7e-10 69.3 36 86.1
C04p19700 Brassica napus HOM05D008105 ORTHO05D010309 2.9e-10 68.6 36 83.3
Lsat_1_v5_gn_4_65960 Lactuca sativa HOM05D008105 ORTHO05D010309 2.9e-10 68.6 50 70.0
arahy.Tifrunner.gnm1.ann1.DTZ4L4 Arachis hypogaea HOM05D008105 ORTHO05D010309 6.6e-10 67.4 32 90.6
ClCG02G013160 Citrullus lanatus HOM05D008105 ORTHO05D010309 8.6e-10 67.0 98 43.9
Nitab4.5_0000172g1030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.5e-09 66.2 34 82.4
Nitab4.5_0000031g0160 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.5e-09 65.5 33 87.9
GSVIVG01014508001 Vitis vinifera HOM05D008105 ORTHO05D010309 5.6e-09 64.3 31 93.5
Nitab4.5_0008578g0040 Nicotiana tabacum HOM05D008105 ORTHO05D010309 9.5e-09 63.5 66 50.0
Nitab4.5_0002418g0140 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.1e-08 62.4 80 46.2
Hma1.2p1_1191F.1_g265450 Hydrangea macrophylla HOM05D008105 ORTHO05D010309 2.8e-08 62.0 42 66.7
ClCG06G007950 Citrullus lanatus HOM05D008105 ORTHO05D010309 8.0e-08 60.5 35 77.1
Nitab4.5_0001607g0060 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.4e-07 59.7 38 71.1
TPR.G25507 Trifolium pratense HOM05D008105 ORTHO05D010309 3.0e-07 58.5 30 83.3
TPR.G23916 Trifolium pratense HOM05D008105 ORTHO05D010309 6.8e-07 57.4 30 83.3


User provided reference genes

Program Settings