Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14691 Sapria himalayana HOM05D000002 ORTHO05D000047 3.7e-23 110.5 50 100.0
SHI28812 Sapria himalayana HOM05D000002 ORTHO05D000047 8.2e-15 82.8 47 78.7
Psat2g125560 Pisum sativum HOM05D000002 ORTHO05D000047 2.1e-10 68.2 47 61.7
Psat5g071560 Pisum sativum HOM05D000002 ORTHO05D000047 2.1e-10 68.2 47 59.6
Psat3g110120 Pisum sativum HOM05D000002 ORTHO05D000047 2.7e-10 67.8 47 59.6
Psat5g245120 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-09 64.7 47 57.4
Cpa.g.sc1.255 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-09 63.5 46 56.5
SHI08373 Sapria himalayana HOM05D000002 ORTHO05D000047 6.7e-09 63.2 48 56.2
Hma1.2p1_0362F.1_g136110 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 62.4 47 55.3
Hma1.2p1_1551F.1_g290130 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 62.4 47 55.3
Psat7g121120 Pisum sativum HOM05D000002 ORTHO05D000047 1.1e-08 62.4 48 52.1
Hma1.2p1_0084F.1_g043170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-08 62.0 47 55.3
Hma1.2p1_0042F.1_g025670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-08 61.6 47 55.3
Hma1.2p1_0896F.1_g233970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-08 61.6 47 55.3
Psat6g094800 Pisum sativum HOM05D000002 ORTHO05D000047 2.0e-08 61.6 47 53.2
Psat3g078200 Pisum sativum HOM05D000002 ORTHO05D000047 2.6e-08 61.2 47 51.1
Eucgr.K02658 Eucalyptus grandis HOM05D000002 ORTHO05D000047 5.7e-08 60.1 47 53.2
Psat6g204680 Pisum sativum HOM05D000002 ORTHO05D000047 9.7e-08 59.3 47 57.4
PSO782G0932 Papaver somniferum HOM05D000002 ORTHO05D000047 1.3e-07 58.9 47 53.2
Hma1.2p1_0281F.1_g113160 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-07 58.5 49 51.0
PSO210G5652 Papaver somniferum HOM05D000002 ORTHO05D000047 1.7e-07 58.5 47 51.1
Psat6g149400 Pisum sativum HOM05D000002 ORTHO05D000047 1.7e-07 58.5 48 50.0
Solyc10g009595.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.2e-07 58.2 47 48.9
Solyc11g011275.1 Solanum lycopersicum HOM05D000002 ORTHO05D000047 2.2e-07 58.2 47 48.9
Solyc11g021363.1 Solanum lycopersicum HOM05D000002 ORTHO05D000047 2.2e-07 58.2 47 48.9
Sopen00g010600 Solanum pennellii HOM05D000002 ORTHO05D000047 2.2e-07 58.2 47 48.9
Sopen01g008150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 58.2 47 48.9
Sopen01g048330 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 58.2 47 48.9
Sopen04g023020 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 58.2 47 48.9
Sopen04g031140 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 58.2 47 48.9
Psat4g121400 Pisum sativum HOM05D000002 ORTHO05D000047 2.8e-07 57.8 47 51.1
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 2.8e-07 57.8 46 50.0
Nn6g32088 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.7e-07 57.4 47 46.8
Psat0s193g0280 Pisum sativum HOM05D000002 ORTHO05D000047 4.8e-07 57.0 47 46.8
Hma1.2p1_0471F.1_g159500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-07 56.6 47 51.1
Psat2g130280 Pisum sativum HOM05D001391 ORTHO05D000047 6.3e-07 56.6 47 46.8
Psat6g106160 Pisum sativum HOM05D000002 ORTHO05D000047 6.3e-07 56.6 47 55.3
CANSAT01G1817 Cannabis sativa HOM05D000002 ORTHO05D000047 8.2e-07 56.2 47 46.8
Sabra17G0008600 Salix brachista HOM05D000002 ORTHO05D000047 8.2e-07 56.2 47 48.9
CANSAT25G2485 Cannabis sativa HOM05D000002 ORTHO05D000047 1.1e-06 55.8 47 48.9
CANSAT78G1870 Cannabis sativa HOM05D000002 ORTHO05D000047 1.1e-06 55.8 47 46.8
Thhalv10029485m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 1.1e-06 55.8 47 51.1
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 55.8 47 42.6
Sed0013391 Sechium edule HOM05D000002 ORTHO05D000047 1.1e-06 55.8 46 45.7
CANSAT54G0702 Cannabis sativa HOM05D000002 ORTHO05D000047 1.4e-06 55.5 47 46.8
Hma1.2p1_1961F.1_g309190 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 55.5 47 48.9
Psat6g086520 Pisum sativum HOM05D000002 ORTHO05D000047 1.4e-06 55.5 43 51.2
Sabra19G0055400 Salix brachista HOM05D000002 ORTHO05D000047 1.4e-06 55.5 47 48.9
CANSAT21G0396 Cannabis sativa HOM05D000002 ORTHO05D000047 2.4e-06 54.7 49 44.9
CANSAT35G1454 Cannabis sativa HOM05D000002 ORTHO05D000047 2.4e-06 54.7 47 44.7
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.4e-06 54.7 47 48.9
Hma1.2p1_0052F.1_g030380 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-06 54.3 47 46.8
Nn2g13090 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.1e-06 54.3 46 45.7
Ah.07g200690 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.1e-06 53.9 48 41.7
Cpa.g.sc227.9 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-06 53.9 47 51.1
Hma1.2p1_0895F.1_g233710 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-06 53.9 47 48.9
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 53.9 47 42.6
SHI14320 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 53.9 47 42.6
SHI27562 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 53.9 47 42.6
Ah.03g140790 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 42.6
CANSAT01G2034 Cannabis sativa HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
CANSAT25G0406 Cannabis sativa HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
CANSAT54G0600 Cannabis sativa HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
CANSAT80G2070 Cannabis sativa HOM05D000002 ORTHO05D000047 5.3e-06 53.5 49 42.9
Thhalv10003063m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 46.8
Psat1g039640 Pisum sativum HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
Psat5g221080 Pisum sativum HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
Psat7g231680 Pisum sativum HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 44.7
Rhsim04G0189400 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.3e-06 53.5 47 42.6
Atru.chr3.2976 Acer truncatum HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 42.6
Ah.07g203190 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 40.4
Cpa.g.sc190.36 Carica papaya HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 44.7
Hma1.2p1_0046F.1_g026950 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 44.7
Hma1.2p1_0384F.1_g140880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 44.7
Hma1.2p1_1117F.1_g259070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-06 53.1 46 41.3
Hma1.2p1_1756F.1_g301060 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 46.8
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.0e-06 53.1 46 41.3
Rhsim02G0004200 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 38.3
Rhsim03G0156500 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 38.3
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.0e-06 53.1 47 38.3
CANSAT54G1758 Cannabis sativa HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 42.6
AUR62010530 Chenopodium quinoa HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 42.6
Ca_14561_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 46.8
Psat4g202080 Pisum sativum HOM05D000002 ORTHO05D000047 9.1e-06 52.8 41 51.2
Psat7g018840 Pisum sativum HOM05D000002 ORTHO05D000047 9.1e-06 52.8 41 51.2
Psat7g213160 Pisum sativum HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 44.7
Rhsim12G0065600 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 38.3
SHI08742 Sapria himalayana HOM05D000002 ORTHO05D000047 9.1e-06 52.8 33 72.7
SHI10167 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-06 52.8 47 42.6
SHI32479 Sapria himalayana HOM05D000002 ORTHO05D000047 9.1e-06 52.8 47 42.6


User provided reference genes

Program Settings