Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.7e-117 426.0 211 100.0
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 5.0e-37 158.7 149 57.7
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 5.0e-37 158.7 149 52.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.9e-36 156.8 148 54.1
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 7.2e-36 154.8 148 53.4
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 9.4e-36 154.5 148 52.0
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.4e-36 154.5 147 55.1
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 1.2e-35 154.1 148 53.4
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.2e-35 154.1 148 52.7
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.6e-35 153.7 148 52.0
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.7e-35 152.9 148 52.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.7e-35 152.9 147 55.1
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.6e-35 152.5 159 49.7
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 4.6e-35 152.1 151 51.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.4e-34 150.6 150 53.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.3e-34 149.8 148 51.4
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 3.0e-34 149.4 149 49.7
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 3.9e-34 149.1 149 51.0
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 5.1e-34 148.7 146 51.4
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 5.1e-34 148.7 148 50.0
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 6.7e-34 148.3 148 51.4
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 8.8e-34 147.9 148 50.7
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.1e-33 147.5 147 53.7
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.5e-33 147.1 150 50.7
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.0e-33 146.7 152 48.0
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.0e-33 146.7 148 52.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 2.0e-33 146.7 148 52.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.3e-33 146.0 149 51.7
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.3e-33 146.0 156 51.3
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 5.7e-33 145.2 149 49.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 5.7e-33 145.2 148 49.3
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 5.7e-33 145.2 148 49.3
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 7.4e-33 144.8 149 48.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 7.4e-33 144.8 146 52.7
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 9.7e-33 144.4 148 52.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.8e-32 142.9 150 47.3
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 2.8e-32 142.9 153 46.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.7e-32 142.5 149 48.3
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 4.8e-32 142.1 155 49.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 4.8e-32 142.1 154 50.0
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 6.3e-32 141.7 155 49.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 8.2e-32 141.4 149 51.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.1e-31 141.0 148 46.6
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.4e-31 140.6 149 49.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.4e-31 140.6 160 49.4
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.8e-31 140.2 149 49.7
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 2.4e-31 139.8 156 48.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.4e-31 139.8 150 50.0
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 3.1e-31 139.4 157 47.8
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.1e-31 139.4 150 48.0
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.1e-31 139.4 160 45.0
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.1e-31 139.4 158 50.0
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.1e-31 139.0 148 51.4
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 4.1e-31 139.0 150 50.0
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.3e-31 138.7 160 46.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 5.3e-31 138.7 153 44.4
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 9.1e-31 137.9 149 50.3
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 9.1e-31 137.9 157 47.1
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.2e-30 137.5 149 49.0
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.5e-30 137.1 159 45.9
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.5e-30 137.1 148 50.7
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-30 137.1 148 50.7
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.5e-30 137.1 150 48.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 2.0e-30 136.7 148 49.3
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.0e-30 136.7 149 47.7
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.6e-30 136.3 149 49.0
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.4e-30 136.0 148 50.0
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 4.5e-30 135.6 159 45.9
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 4.5e-30 135.6 150 46.0
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 4.5e-30 135.6 148 48.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 4.5e-30 135.6 163 45.4
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 5.9e-30 135.2 159 45.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.7e-30 134.8 148 50.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.0e-29 134.4 148 48.6
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.7e-29 133.7 148 46.6
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.7e-29 133.7 159 45.3
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.7e-29 133.7 150 48.0
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.7e-29 133.7 148 48.0
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.9e-29 132.9 148 48.6
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 6.5e-29 131.7 148 47.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 8.5e-29 131.3 148 48.6
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 8.5e-29 131.3 148 47.3
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.1e-28 131.0 148 47.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.1e-28 131.0 148 46.6
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.9e-28 130.2 148 45.9
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 2.5e-28 129.8 151 45.7
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 3.2e-28 129.4 148 45.3
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 4.2e-28 129.0 148 45.3
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.5e-28 128.6 148 48.6
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 5.5e-28 128.6 151 43.7
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 7.2e-28 128.3 148 45.9
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 7.2e-28 128.3 148 45.3
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 9.4e-28 127.9 153 45.8
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.2e-27 127.5 148 45.3
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-27 127.1 154 44.8
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.1e-27 126.7 147 45.6
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 1.4e-26 124.0 148 43.2
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.9e-26 122.5 152 43.4
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.9e-26 122.5 152 43.4
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.5e-25 120.6 148 43.9
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 5.7e-25 118.6 152 44.1
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.5e-22 110.5 149 41.6
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 6.5e-21 105.1 149 39.6
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 8.5e-21 104.8 156 41.0
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 3.2e-20 102.8 101 50.5
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 9.4e-20 101.3 150 41.3
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.7e-19 99.0 98 48.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 6.7e-18 95.1 154 37.0
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 7.5e-17 91.7 71 56.3
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 9.4e-12 74.7 63 50.8
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.6e-11 73.9 70 55.7
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.6e-11 73.9 155 29.0
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.2e-09 67.8 75 46.7
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 2.2e-08 63.5 138 32.6
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 7.0e-07 58.5 135 30.4


User provided reference genes

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