Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 6.7e-165 583.9 295 100.0
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 7.2e-34 148.7 291 39.5
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 6.7e-32 142.1 294 37.1
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 7.4e-31 138.7 299 37.1
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 9.7e-31 138.3 302 36.8
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 2.2e-30 137.1 294 35.0
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 2.8e-30 136.7 283 36.7
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 3.7e-30 136.3 271 36.9
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 6.3e-30 135.6 303 35.6
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 1.4e-29 134.4 302 36.1
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.4e-29 134.4 292 37.0
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 1.4e-29 134.4 301 34.9
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 3.1e-29 133.3 291 34.0
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 9.1e-29 131.7 296 36.1
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 9.1e-29 131.7 296 36.1
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 1.5e-28 131.0 297 34.7
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 1.5e-28 131.0 304 35.2
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 2.0e-28 130.6 308 35.7
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 3.5e-28 129.8 286 35.7
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 3.5e-28 129.8 296 35.1
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 4.5e-28 129.4 271 37.3
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 4.5e-28 129.4 300 35.3
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 5.9e-28 129.0 308 33.4
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 1.0e-27 128.3 291 34.7
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 1.7e-27 127.5 303 37.0
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 2.9e-27 126.7 305 37.4
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 1.5e-26 124.4 303 34.3
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 1.9e-26 124.0 310 32.3
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 2.5e-26 123.6 277 35.4
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 5.5e-26 122.5 293 36.2
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 9.4e-26 121.7 311 33.1
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 9.4e-26 121.7 286 33.6
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 1.2e-25 121.3 309 34.0
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 3.6e-25 119.8 289 37.0
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 4.7e-25 119.4 287 34.5
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 8.0e-25 118.6 296 34.1
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 8.0e-25 118.6 317 33.1
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 1.0e-24 118.2 291 33.3
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 1.4e-24 117.9 311 33.1
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 1.4e-24 117.9 273 35.9
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 1.8e-24 117.5 301 32.6
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 2.3e-24 117.1 293 33.4
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 3.9e-24 116.3 293 33.1
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 3.9e-24 116.3 293 32.8
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 8.8e-24 115.2 296 34.1
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 1.1e-23 114.8 284 33.1
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 1.5e-23 114.4 293 32.8
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 2.0e-23 114.0 314 31.8
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 2.6e-23 113.6 185 39.5
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 9.7e-23 111.7 292 33.2
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 1.3e-22 111.3 285 33.0
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 3.7e-22 109.8 278 30.9
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 3.7e-22 109.8 307 32.9
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 3.7e-22 109.8 302 31.5
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 6.3e-22 109.0 273 33.0
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 2.4e-21 107.1 281 33.8
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 4.1e-21 106.3 290 30.3
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 9.1e-21 105.1 285 34.7
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 1.2e-20 104.8 285 30.9
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 2.0e-20 104.0 168 41.7
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 2.0e-20 104.0 284 30.6
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 3.5e-20 103.2 284 33.8
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 5.9e-20 102.4 284 29.6
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 2.2e-19 100.5 268 32.5
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 6.5e-19 99.0 277 30.3
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 8.5e-19 98.6 354 27.7
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 1.9e-18 97.4 294 30.6
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.2e-18 96.7 263 29.7
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 3.2e-18 96.7 357 28.0
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 5.5e-18 95.9 266 30.8
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 5.5e-18 95.9 360 28.6
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 7.2e-18 95.5 168 38.1
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 9.4e-18 95.1 286 29.7
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 1.6e-17 94.4 271 30.3
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 8.0e-17 92.0 282 28.7
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 1.0e-16 91.7 282 29.8
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.6e-15 87.0 293 30.4
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 7.5e-15 85.5 67 56.7
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 2.2e-14 84.0 54 68.5
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 2.2e-14 84.0 65 60.0
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 9.1e-13 78.6 316 29.1
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 2.2e-11 73.9 293 29.4
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 5.0e-11 72.8 283 26.9
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 5.0e-11 72.8 75 45.3
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 71.2 194 32.0
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 1.9e-10 70.9 287 28.2
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 2.7e-09 67.0 40 70.0
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 4.7e-09 66.2 256 28.9
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 6.1e-09 65.9 172 35.5
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 1.0e-08 65.1 281 27.4
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 1.4e-08 64.7 40 65.0
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 1.5e-07 61.2 166 32.5
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 2.6e-07 60.5 169 33.1


User provided reference genes

Program Settings