Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 4.3e-124 448.0 220 100.0
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 8.0e-46 188.0 116 73.3
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 5.2e-45 185.3 107 78.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 6.7e-45 184.9 107 76.6
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.2e-44 184.1 116 71.6
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.2e-44 184.1 107 75.7
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.5e-44 183.7 116 70.7
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.5e-44 183.7 107 77.6
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.5e-44 183.7 107 76.6
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.0e-44 183.3 116 72.4
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.6e-44 183.0 163 55.8
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.3e-44 182.6 107 75.7
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.3e-44 182.6 144 59.7
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 3.3e-44 182.6 112 74.1
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.3e-44 182.6 109 73.4
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.3e-44 182.6 116 70.7
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 4.4e-44 182.2 112 73.2
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 4.4e-44 182.2 126 65.9
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 5.7e-44 181.8 107 77.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 5.7e-44 181.8 106 75.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.7e-44 181.0 107 75.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 9.7e-44 181.0 116 70.7
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 9.7e-44 181.0 107 77.6
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.3e-43 180.6 116 69.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.3e-43 180.6 116 69.8
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.3e-43 180.6 116 70.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-43 180.6 107 75.7
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.3e-43 180.6 144 58.3
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.3e-43 180.6 107 75.7
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.3e-43 180.6 112 75.0
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.3e-43 180.6 112 75.0
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.3e-43 180.6 107 76.6
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.7e-43 180.3 112 69.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.7e-43 180.3 126 65.9
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.2e-43 179.9 107 74.8
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.8e-43 179.5 107 73.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.8e-43 179.5 107 73.8
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.8e-43 179.5 107 72.9
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.8e-43 179.5 107 75.7
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.8e-43 179.5 107 75.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.7e-43 179.1 112 72.3
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 3.7e-43 179.1 116 69.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 4.8e-43 178.7 106 73.6
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 4.8e-43 178.7 107 73.8
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.8e-43 178.7 107 73.8
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 4.8e-43 178.7 107 73.8
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 6.3e-43 178.3 112 72.3
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 6.3e-43 178.3 127 63.8
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 6.3e-43 178.3 107 73.8
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.2e-43 177.9 107 72.9
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 8.2e-43 177.9 107 73.8
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.1e-42 177.6 116 70.7
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.4e-42 177.2 112 71.4
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.4e-42 177.2 107 74.8
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.4e-42 177.2 112 71.4
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.4e-42 177.2 107 74.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.4e-42 177.2 112 72.3
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.8e-42 176.8 112 71.4
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.8e-42 176.8 125 62.4
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.8e-42 176.8 127 63.0
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.4e-42 176.4 107 72.0
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.4e-42 176.4 107 72.0
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 3.1e-42 176.0 107 72.9
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.1e-42 176.0 112 71.4
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 4.1e-42 175.6 107 74.8
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 4.1e-42 175.6 107 72.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 4.1e-42 175.6 107 72.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 4.1e-42 175.6 107 72.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 7.0e-42 174.9 127 63.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 9.1e-42 174.5 107 73.8
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 9.1e-42 174.5 119 64.7
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 9.1e-42 174.5 107 72.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.2e-41 174.1 107 72.0
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.2e-41 174.1 107 72.0
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.2e-41 174.1 127 63.8
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.6e-41 173.7 107 71.0
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.6e-41 173.7 107 74.8
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.0e-41 173.3 108 72.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.0e-41 173.3 107 72.0
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.7e-41 172.9 107 72.9
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.7e-41 172.9 107 72.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.7e-41 172.9 107 72.9
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.5e-41 172.6 107 71.0
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 4.5e-41 172.2 118 65.3
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.5e-41 172.2 112 70.5
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 7.7e-41 171.4 122 67.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.0e-40 171.0 127 61.4
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.0e-40 171.0 107 72.0
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.8e-40 169.1 104 72.1
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 5.0e-40 168.7 104 72.1
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 5.0e-40 168.7 106 69.8
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.5e-39 167.2 107 70.1
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.9e-39 166.8 127 60.6
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.2e-39 166.0 107 69.2
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.1e-38 163.3 148 55.4
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.7e-38 162.9 149 55.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.4e-37 160.6 127 59.8
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.4e-37 160.6 144 57.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.2e-36 157.5 106 67.9
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 3.7e-35 152.5 154 53.9
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 4.8e-35 152.1 110 65.5
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 7.0e-34 148.3 90 71.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.3e-32 144.1 88 75.0
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 8.5e-32 141.4 85 74.1
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.9e-31 140.2 84 75.0
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 8.0e-30 134.8 107 58.9
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.8e-29 133.7 134 52.2
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 8.8e-29 131.3 126 48.4
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.4e-28 129.4 126 48.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 4.4e-28 129.0 126 46.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 7.5e-28 128.3 113 51.3
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 9.8e-28 127.9 127 52.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.8e-25 118.2 83 60.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.9e-23 113.6 107 52.3
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.4e-20 102.8 105 44.8
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.7e-19 100.5 57 77.2
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 5.9e-17 92.0 124 40.3
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 4.7e-14 82.4 95 38.9
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.4e-13 80.9 53 69.8
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.8e-13 80.5 66 54.5
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 4.7e-06 55.8 71 38.0


User provided reference genes

Program Settings