Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 7.2e-203 710.3 345 100.0
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.2e-93 347.4 330 53.6
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 3.6e-93 345.9 337 51.6
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.1e-93 345.1 331 54.4
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.1e-93 345.1 331 54.4
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.0e-92 344.4 337 53.4
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.8e-92 343.6 331 52.6
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 2.0e-91 340.1 331 52.9
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.6e-91 339.7 331 52.3
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.4e-91 339.3 335 50.7
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 3.4e-91 339.3 335 53.7
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.8e-91 337.8 331 52.6
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 9.8e-91 337.8 337 52.5
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 9.8e-91 337.8 335 51.6
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.7e-90 337.0 331 52.0
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.8e-90 336.3 347 49.9
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.7e-90 335.9 335 52.2
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 8.3e-90 334.7 348 49.1
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.1e-89 334.3 331 52.6
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.8e-89 333.6 335 51.9
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.4e-89 333.2 330 52.1
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 3.1e-89 332.8 335 50.7
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 9.1e-89 331.3 331 51.4
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.7e-88 329.7 338 52.4
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 5.9e-88 328.6 331 51.1
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 7.7e-88 328.2 340 51.8
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.3e-87 327.4 333 51.4
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.7e-87 327.0 331 50.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.7e-87 327.0 334 50.3
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 2.2e-87 326.6 341 50.1
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 2.9e-87 326.2 336 51.2
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 3.8e-87 325.9 335 52.2
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 8.5e-87 324.7 329 52.6
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.5e-86 323.9 335 49.3
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 2.5e-86 323.2 344 51.7
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.2e-86 322.8 333 52.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 4.2e-86 322.4 336 51.8
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 7.2e-86 321.6 332 53.0
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.6e-85 320.5 331 50.8
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 2.8e-85 319.7 336 51.8
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.8e-85 319.7 334 50.6
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 3.6e-85 319.3 338 52.4
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 8.0e-85 318.2 331 50.5
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 8.0e-85 318.2 332 48.5
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.0e-84 317.8 335 51.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-84 317.4 339 49.9
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.8e-84 317.0 352 48.0
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.8e-84 317.0 338 52.1
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.3e-84 316.6 341 49.9
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 6.8e-84 315.1 333 52.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.2e-83 314.3 336 50.3
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.0e-83 313.5 332 50.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.0e-83 313.5 338 49.7
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 3.4e-83 312.8 337 49.9
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.4e-83 312.8 338 49.1
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 7.5e-83 311.6 330 47.3
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.3e-82 310.8 338 51.2
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.2e-82 310.1 341 48.1
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 2.8e-82 309.7 336 47.9
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 4.9e-82 308.9 340 46.8
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 4.1e-81 305.8 331 48.6
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 5.4e-81 305.4 330 50.6
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 5.4e-81 305.4 321 51.7
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 9.2e-81 304.7 334 50.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-80 304.3 339 48.1
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 2.7e-80 303.1 305 50.8
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 7.8e-80 301.6 340 47.1
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 3.8e-79 299.3 338 48.2
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.1e-78 297.7 331 49.2
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.5e-78 297.4 337 48.7
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.5e-78 296.6 332 47.3
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 7.3e-78 295.0 300 52.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 9.5e-78 294.7 337 45.7
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.6e-77 293.9 331 46.2
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.1e-77 293.5 331 45.9
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.8e-77 293.1 334 47.3
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.8e-77 293.1 334 47.3
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.0e-76 289.7 298 49.7
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 5.2e-76 288.9 336 46.4
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 6.8e-76 288.5 303 51.2
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.2e-75 287.7 332 47.3
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 2.0e-75 287.0 336 47.6
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 2.6e-75 286.6 300 50.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 5.7e-75 285.4 339 46.6
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 9.8e-75 284.6 338 45.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 9.8e-75 284.6 330 47.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.3e-74 284.3 297 48.8
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.6e-72 277.3 381 42.5
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 8.6e-71 271.6 339 44.0
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 6.2e-69 265.4 336 45.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 6.8e-68 261.9 338 43.5
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.5e-67 260.8 268 50.7
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 6.0e-64 248.8 333 41.1
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 5.0e-63 245.7 267 47.9
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 3.3e-62 243.0 332 42.5
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 3.1e-60 236.5 352 40.9
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 6.8e-60 235.3 344 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 4.4e-59 232.6 334 39.5
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.3e-58 231.1 262 50.4
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.2e-58 230.3 371 37.7
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 3.7e-58 229.6 337 42.1
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.2e-56 224.6 332 40.7
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.1e-56 223.8 389 36.2
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 8.4e-50 201.8 193 54.4
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 9.2e-49 198.4 191 54.5
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 4.4e-43 179.5 141 62.4
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 6.2e-37 159.1 346 32.1
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.3e-34 151.4 133 57.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.7e-34 151.0 133 54.9
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 3.0e-31 140.2 103 63.1
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.2e-27 128.3 202 39.1
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.0e-27 127.5 162 43.2
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 4.5e-27 126.3 101 63.4
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 5.5e-25 119.4 87 65.5
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 3.0e-23 113.6 117 48.7
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.1e-22 111.7 332 28.3
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 2.9e-18 97.1 120 40.8
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.8e-15 87.8 148 39.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 5.1e-15 86.3 89 47.2
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.1e-12 78.6 67 55.2
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-12 78.6 61 62.3
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 8.8e-07 58.9 112 33.0
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 4.3e-06 56.6 89 38.2


User provided reference genes

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