Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13526 Sapria himalayana HOM05D001474 ORTHO05D001461 1.6e-126 456.1 224 100.0
Cpa.g.c30120 Carica papaya HOM05D001474 ORTHO05D001461 3.8e-19 99.4 180 37.2
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 3.8e-19 99.4 70 70.0
CANSAT56G4331 Cannabis sativa HOM05D001474 ORTHO05D001461 2.5e-18 96.7 126 42.1
Eucgr.E01451 Eucalyptus grandis HOM05D001474 ORTHO05D001461 2.5e-18 96.7 119 44.5
Phvul.010G080400 Phaseolus vulgaris HOM05D001474 ORTHO05D001461 5.5e-18 95.5 113 46.0
PGR042G1031 Punica granatum HOM05D001474 ORTHO05D001461 5.5e-18 95.5 141 41.1
Potri.014G067300 Populus trichocarpa HOM05D001474 ORTHO05D001461 7.2e-18 95.1 117 43.6
ClCG05G002410 Citrullus lanatus HOM05D001474 ORTHO05D001461 9.3e-18 94.7 128 43.0
Duzib133G0123 Durio zibethinus HOM05D001474 ORTHO05D001461 9.3e-18 94.7 128 41.4
Atru.chr5.276 Acer truncatum HOM05D001474 ORTHO05D001461 1.6e-17 94.0 121 43.8
AUR62013685 Chenopodium quinoa HOM05D001474 ORTHO05D001461 2.1e-17 93.6 124 42.7
CAN.G911.5 Capsicum annuum HOM05D001474 ORTHO05D001461 2.7e-17 93.2 147 40.1
MELO3C006206.2 Cucumis melo HOM05D001474 ORTHO05D001461 2.7e-17 93.2 128 42.2
FAN08G3567 Fragaria x ananassa HOM05D001474 ORTHO05D001461 2.7e-17 93.2 121 44.6
Lj3g0013625 Lotus japonicus HOM05D001474 ORTHO05D001461 2.7e-17 93.2 123 43.9
Nitab4.5_0010730g0010 Nicotiana tabacum HOM05D001474 ORTHO05D001461 2.7e-17 93.2 124 43.5
Hund17036 Selenicereus undatus HOM05D001474 ORTHO05D001461 2.7e-17 93.2 126 39.7
Glyma.01G138300 Glycine max HOM05D001474 ORTHO05D001461 3.6e-17 92.8 123 43.1
Duzib138G1270 Durio zibethinus HOM05D001474 ORTHO05D001461 4.6e-17 92.4 128 42.2
Gohir.A12G101300 Gossypium hirsutum HOM05D001474 ORTHO05D001461 4.6e-17 92.4 128 43.0
Sabra14G0047300 Salix brachista HOM05D001474 ORTHO05D001461 4.6e-17 92.4 120 41.7
Sed0006162 Sechium edule HOM05D001474 ORTHO05D001461 4.6e-17 92.4 117 44.4
Duzib138G0487 Durio zibethinus HOM05D001474 ORTHO05D001461 6.1e-17 92.0 128 40.6
FAN10G3912 Fragaria x ananassa HOM05D001474 ORTHO05D001461 6.1e-17 92.0 110 42.7
FAN13G2011 Fragaria x ananassa HOM05D001474 ORTHO05D001461 6.1e-17 92.0 111 43.2
Gohir.D12G104200 Gossypium hirsutum HOM05D001474 ORTHO05D001461 6.1e-17 92.0 128 42.2
VMungo0331G1224 Vigna mungo HOM05D001474 ORTHO05D001461 6.1e-17 92.0 123 44.7
Aqoxy7G00709 Aquilegia oxysepala HOM05D001474 ORTHO05D001461 7.9e-17 91.7 125 40.0
Glyma.03G028800 Glycine max HOM05D001474 ORTHO05D001461 7.9e-17 91.7 123 44.7
Manes.01G267700 Manihot esculenta HOM05D001474 ORTHO05D001461 7.9e-17 91.7 128 43.0
FAN01G1996 Fragaria x ananassa HOM05D000009 ORTHO05D001461 1.0e-16 91.3 111 43.2
Oeu037931.3 Olea europaea HOM05D001474 ORTHO05D001461 1.0e-16 91.3 127 40.9
AUR62004185 Chenopodium quinoa HOM05D001474 ORTHO05D001461 1.3e-16 90.9 124 41.9
FvH4_7g11350 Fragaria vesca HOM05D001474 ORTHO05D001461 1.3e-16 90.9 110 42.7
FAN06G0799 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.3e-16 90.9 110 42.7
Phvul.010G080500 Phaseolus vulgaris HOM05D001474 ORTHO05D001461 1.3e-16 90.9 123 44.7
arahy.Tifrunner.gnm1.ann1.931R8V Arachis hypogaea HOM05D001474 ORTHO05D001461 1.8e-16 90.5 142 40.8
CsaV3_3G009840 Cucumis sativus L. HOM05D001474 ORTHO05D001461 1.8e-16 90.5 128 41.4
Nn1g01106 Nelumbo nucifera HOM05D001474 ORTHO05D001461 1.8e-16 90.5 126 42.1
COL.COLO4_12520 Corchorus olitorius HOM05D001474 ORTHO05D001461 2.3e-16 90.1 123 43.1
TPR.G7601 Trifolium pratense HOM05D001474 ORTHO05D001461 2.3e-16 90.1 123 45.5
PGSC0003DMG400026008 Solanum tuberosum HOM05D001474 ORTHO05D001461 3.0e-16 89.7 140 39.3
CSS0044636 Camellia sinensis var. sinensis HOM05D001474 ORTHO05D001461 3.9e-16 89.4 126 41.3
Haze_02654 Corylus avellana HOM05D001474 ORTHO05D001461 5.1e-16 89.0 133 42.1
FvH4_7g11370 Fragaria vesca HOM05D001474 ORTHO05D001461 5.1e-16 89.0 110 41.8
SHI33527 Sapria himalayana HOM05D005490 ORTHO05D006485 5.1e-16 89.0 65 64.6
VMungo0331G0694 Vigna mungo HOM05D001474 ORTHO05D001461 5.1e-16 89.0 113 45.1
arahy.Tifrunner.gnm1.ann1.8H5FPK Arachis hypogaea HOM05D001474 ORTHO05D001461 6.7e-16 88.6 128 42.2
EL10Ac1g00863 Beta vulgaris HOM05D001474 ORTHO05D001461 6.7e-16 88.6 124 41.9
BcaB02g08948 Brassica carinata HOM05D001474 ORTHO05D001461 6.7e-16 88.6 122 40.2
A05p05230 Brassica napus HOM05D001474 ORTHO05D001461 6.7e-16 88.6 126 38.9
BraA05t19493Z Brassica rapa HOM05D001474 ORTHO05D001461 6.7e-16 88.6 126 38.9
CiPaw.13G034300 Carya illinoinensis HOM05D001474 ORTHO05D001461 6.7e-16 88.6 126 42.1
Ca_18225_v3 Cicer arietinum L. HOM05D001474 ORTHO05D001461 6.7e-16 88.6 123 43.9
FAN06G4417 Fragaria x ananassa HOM05D000009 ORTHO05D001461 6.7e-16 88.6 108 42.6
Prupe.2G141300 Prunus persica HOM05D001474 ORTHO05D001461 6.7e-16 88.6 119 42.9
QL04p040000 Quercus lobata HOM05D001474 ORTHO05D001461 6.7e-16 88.6 126 41.3
Solyc01g091070.3 Solanum lycopersicum HOM05D001474 ORTHO05D001461 6.7e-16 88.6 141 38.3
Sopen01g036820 Solanum pennellii HOM05D001474 ORTHO05D001461 6.7e-16 88.6 141 38.3
MD07G1118400 Malus domestica HOM05D001474 ORTHO05D001461 8.7e-16 88.2 111 44.1
MD07G1118600 Malus domestica HOM05D001474 ORTHO05D001461 8.7e-16 88.2 111 44.1
PSO782G5252 Papaver somniferum HOM05D001474 ORTHO05D001461 8.7e-16 88.2 114 43.0
SalBow5G3084 Salvia bowleyana HOM05D001474 ORTHO05D001461 8.7e-16 88.2 142 38.0
GSVIVG01027655001 Vitis vinifera HOM05D001474 ORTHO05D001461 8.7e-16 88.2 128 42.2
CiPaw.13G034400 Carya illinoinensis HOM05D001474 ORTHO05D001461 1.1e-15 87.8 126 42.1
Gorai.008G113300 Gossypium raimondii HOM05D001474 ORTHO05D001461 1.1e-15 87.8 128 41.4
BcaC02g12234 Brassica carinata HOM05D001474 ORTHO05D001461 1.5e-15 87.4 126 38.9
C04p06150 Brassica napus HOM05D001474 ORTHO05D001461 1.5e-15 87.4 126 38.9
BolC4t22239H Brassica oleracea HOM05D001474 ORTHO05D001461 1.5e-15 87.4 126 38.9
RcHm_v2.0_Chr1g0349561 Rosa chinensis HOM05D001474 ORTHO05D001461 1.5e-15 87.4 110 42.7
CSS0019526 Camellia sinensis var. sinensis HOM05D001474 ORTHO05D001461 1.9e-15 87.0 126 40.5
TAR375G0828 Trochodendron aralioides HOM05D001474 ORTHO05D001461 1.9e-15 87.0 118 42.4
vmacro13424 Vaccinium macrocarpon HOM05D001474 ORTHO05D001461 2.5e-15 86.7 119 40.3
vmacro13425 Vaccinium macrocarpon HOM05D001474 ORTHO05D001461 2.5e-15 86.7 119 40.3
Hma1.2p1_0072F.1_g038270 Hydrangea macrophylla HOM05D001474 ORTHO05D001461 3.3e-15 86.3 140 40.0
Peaxi162Scf00013g02918 Petunia axillaris HOM05D001474 ORTHO05D001461 3.3e-15 86.3 140 37.1
RcHm_v2.0_Chr1g0349651 Rosa chinensis HOM05D001474 ORTHO05D001461 3.3e-15 86.3 110 41.8
THA.LOC104802454 Tarenaya hassleriana HOM05D001474 ORTHO05D001461 3.3e-15 86.3 126 38.9
Os10g0508400 Oryza sativa ssp. japonica HOM05D001474 ORTHO05D001461 4.3e-15 85.9 111 42.3
PSO170G4369 Papaver somniferum HOM05D001474 ORTHO05D001461 4.3e-15 85.9 114 42.1
MSTRG.17173 Avicennia marina HOM05D001474 ORTHO05D001461 5.7e-15 85.5 127 40.9
Cfa011193 Carpinus fangiana HOM05D001474 ORTHO05D001461 5.7e-15 85.5 133 40.6
Dinv44138 Davidia involucrata HOM05D000036 ORTHO05D001461 5.7e-15 85.5 127 38.6
Rhsim07G0029400 Rhododendron simsii HOM05D001474 ORTHO05D001461 5.7e-15 85.5 126 39.7
Rhsim07G0029600 Rhododendron simsii HOM05D001474 ORTHO05D001461 5.7e-15 85.5 126 39.7
RhsimUnG0228100 Rhododendron simsii HOM05D001474 ORTHO05D001461 5.7e-15 85.5 126 39.7
MD02G1206000 Malus domestica HOM05D001474 ORTHO05D001461 7.4e-15 85.1 119 41.2
AT2G45240 Arabidopsis thaliana HOM05D001474 ORTHO05D001461 9.7e-15 84.7 121 39.7
Cc02_g24180 Coffea canephora HOM05D001474 ORTHO05D001461 9.7e-15 84.7 126 38.9
Sc23g0001150 Simmondsia chinensis HOM05D001474 ORTHO05D001461 9.7e-15 84.7 125 38.4
SHI17845 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-14 84.3 50 82.0
Zm00001eb220650 Zea mays HOM05D001474 ORTHO05D001461 1.3e-14 84.3 108 40.7
Aa31LG1G26780 Aethionema arabicum HOM05D001474 ORTHO05D001461 1.6e-14 84.0 126 38.1
Thhalv10001475m.g Eutrema salsugineum HOM05D001474 ORTHO05D001461 1.6e-14 84.0 126 38.1
Lj7A531T58 Lonicera japonica HOM05D001474 ORTHO05D001461 1.6e-14 84.0 120 41.7
Carub.0004s2785 Capsella rubella HOM05D001474 ORTHO05D001461 2.2e-14 83.6 126 38.1
HPP92_022304 Vanilla planifolia HOM05D001474 ORTHO05D001461 2.2e-14 83.6 112 42.0
MBI04_g11447_MAGBIO Magnolia biondii HOM05D001474 ORTHO05D001461 2.8e-14 83.2 138 37.0
Psat7g230720 Pisum sativum HOM05D001474 ORTHO05D001461 2.8e-14 83.2 124 39.5
TWI14G0338 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 2.8e-14 83.2 128 38.3
TWI14G0591 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 2.8e-14 83.2 128 38.3
TWI14G0834 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 2.8e-14 83.2 128 38.3
HanXRQChr06g0169451 Helianthus annuus HOM05D001474 ORTHO05D001461 3.7e-14 82.8 126 38.9
Sp4g27270 Schrenkiella parvula HOM05D001474 ORTHO05D001461 4.8e-14 82.4 126 37.3
SpUn0031_0050 Schrenkiella parvula HOM05D001474 ORTHO05D001461 4.8e-14 82.4 126 37.3
Thecc.01G379400 Theobroma cacao HOM05D001474 ORTHO05D001461 4.8e-14 82.4 126 39.7
CARHR140460 Cardamine hirsuta HOM05D001474 ORTHO05D001461 6.3e-14 82.0 118 38.1
CDE04G1340 Ceratophyllum demersum HOM05D001474 ORTHO05D001461 8.2e-14 81.6 118 39.0
Migut.B01612 Erythranthe guttata HOM05D001474 ORTHO05D001461 8.2e-14 81.6 128 39.1
Migut.O00813 Erythranthe guttata HOM05D001474 ORTHO05D001461 8.2e-14 81.6 128 39.1
SalBow5G1473 Salvia bowleyana HOM05D001474 ORTHO05D001461 8.2e-14 81.6 119 39.5
SMO171G0038 Selaginella moellendorffii HOM05D001474 ORTHO05D001461 8.2e-14 81.6 115 38.3
Ciclev10020473m.g Citrus clementina HOM05D001474 ORTHO05D001461 1.1e-13 81.3 122 37.7
Lsat_1_v5_gn_7_9300 Lactuca sativa HOM05D001474 ORTHO05D001461 1.1e-13 81.3 128 39.8
RcHm_v2.0_Chr7g0223151 Rosa chinensis HOM05D000873 ORTHO05D001461 1.1e-13 81.3 110 40.0
AL4G44350 Arabidopsis lyrata HOM05D001474 ORTHO05D001461 1.4e-13 80.9 123 37.4
DCAR_008547 Daucus carota HOM05D001474 ORTHO05D001461 1.8e-13 80.5 120 39.2
MSTRG.20735 Avicennia marina HOM05D001474 ORTHO05D001461 2.4e-13 80.1 118 41.5
SGA_v2.0_scaffold153G36983 Striga asiatica HOM05D001474 ORTHO05D001461 3.1e-13 79.7 118 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1141 Anthoceros agrestis HOM05D001474 ORTHO05D001461 4.1e-13 79.3 119 37.8
MBI12_g24113_MAGBIO Magnolia biondii HOM05D002462 ORTHO05D002893 4.1e-13 79.3 118 38.1
FAN10G3888 Fragaria x ananassa HOM05D001474 ORTHO05D001461 6.9e-13 78.6 104 40.4
Pp3c21_22170 Physcomitrium patens HOM05D001474 ORTHO05D001461 6.9e-13 78.6 129 34.9
Lalb_Chr07g0190021 Lupinus albus HOM05D001474 ORTHO05D001461 9.0e-13 78.2 116 39.7
Lalb_Chr12g0208091 Lupinus albus HOM05D001474 ORTHO05D001461 9.0e-13 78.2 129 35.7
unitig_26.g8899 Utricularia gibba HOM05D001474 ORTHO05D001461 9.0e-13 78.2 119 40.3
ECA236G0927 Erigeron canadensis HOM05D001474 ORTHO05D001461 1.5e-12 77.4 126 37.3
Mapoly0013s0165 Marchantia polymorpha HOM05D001474 ORTHO05D001461 2.2e-11 73.6 118 35.6
RcHm_v2.0_Chr4g0403521 Rosa chinensis HOM05D001474 ORTHO05D001461 5.0e-11 72.4 107 38.3
SHI05889 Sapria himalayana HOM05D000034 ORTHO05D000037 5.0e-11 72.4 40 82.5
Cre06.g279750 Chlamydomonas reinhardtii HOM05D001474 ORTHO05D001461 8.5e-11 71.6 171 28.1
SHI08367 Sapria himalayana HOM05D000030 ORTHO05D000031 4.2e-10 69.3 39 84.6
Nitab4.5_0000457g0040 Nicotiana tabacum HOM05D001474 ORTHO05D001461 7.2e-10 68.6 93 39.8
SHI31903 Sapria himalayana HOM05D003136 ORTHO05D003562 4.6e-09 65.9 41 78.0
SHI21066 Sapria himalayana HOM05D001474 ORTHO05D006606 7.9e-09 65.1 37 73.0
CBR_g18681 Chara braunii HOM05D001474 ORTHO05D001461 6.7e-08 62.0 146 26.7
SEGI_25320 Sequoiadendron giganteum HOM05D001474 ORTHO05D001461 1.5e-07 60.8 62 48.4
SHI03855 Sapria himalayana HOM05D001474 ORTHO05D001461 1.3e-06 57.8 33 75.8


User provided reference genes

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