Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13495 Sapria himalayana HOM05D002775 ORTHO05D003262 1.6e-103 379.4 186 100.0
Lalb_Chr25g0286931 Lupinus albus HOM05D002775 ORTHO05D003262 7.0e-27 124.8 89 68.5
Sabra06G0027700 Salix brachista HOM05D002775 ORTHO05D003262 1.3e-25 120.6 98 63.3
TPR.G32736 Trifolium pratense HOM05D002775 ORTHO05D003262 1.1e-24 117.5 88 65.9
MD12G1093300 Malus domestica HOM05D002775 ORTHO05D003262 2.5e-24 116.3 74 75.7
Thecc.05G137200 Theobroma cacao HOM05D002775 ORTHO05D003262 3.3e-24 115.9 117 53.0
Glyma.03G130300 Glycine max HOM05D002775 ORTHO05D003262 4.2e-24 115.5 113 56.6
MD14G1085300 Malus domestica HOM05D002775 ORTHO05D003262 4.2e-24 115.5 74 75.7
Manes.09G006500 Manihot esculenta HOM05D002775 ORTHO05D003262 4.2e-24 115.5 74 74.3
Prupe.7G041200 Prunus persica HOM05D002775 ORTHO05D003262 4.2e-24 115.5 74 75.7
Lj1g0020632 Lotus japonicus HOM05D002775 ORTHO05D003262 5.5e-24 115.2 71 77.5
Sabra16G0039600 Salix brachista HOM05D002775 ORTHO05D003262 5.5e-24 115.2 95 61.1
Sabra16G0044300 Salix brachista HOM05D002775 ORTHO05D003262 5.5e-24 115.2 98 59.2
Potri.006G040800 Populus trichocarpa HOM05D002775 ORTHO05D003262 7.2e-24 114.8 98 57.1
Potri.016G037600 Populus trichocarpa HOM05D002775 ORTHO05D003262 7.2e-24 114.8 98 59.2
Phvul.001G126300 Phaseolus vulgaris HOM05D002775 ORTHO05D003262 9.5e-24 114.4 73 75.3
Psat3g077120 Pisum sativum HOM05D002775 ORTHO05D003262 9.5e-24 114.4 71 76.1
RcHm_v2.0_Chr2g0125431 Rosa chinensis HOM05D002775 ORTHO05D003262 9.5e-24 114.4 74 74.3
CiPaw.09G046700 Carya illinoinensis HOM05D002775 ORTHO05D003262 1.2e-23 114.0 74 73.0
QL07p009774 Quercus lobata HOM05D002775 ORTHO05D003262 1.6e-23 113.6 74 73.0
TAR636G1121 Trochodendron aralioides HOM05D002775 ORTHO05D003262 1.6e-23 113.6 74 71.6
arahy.Tifrunner.gnm1.ann1.LX9DGM Arachis hypogaea HOM05D002775 ORTHO05D003262 2.1e-23 113.2 79 68.4
CsaV3_3G040280 Cucumis sativus L. HOM05D002775 ORTHO05D003262 2.1e-23 113.2 86 65.1
VMungo1383G3448 Vigna mungo HOM05D002775 ORTHO05D003262 2.1e-23 113.2 91 62.6
ClCG10G016140 Citrullus lanatus HOM05D002775 ORTHO05D003262 2.8e-23 112.8 74 73.0
Lalb_Chr20g0110181 Lupinus albus HOM05D002775 ORTHO05D003262 2.8e-23 112.8 96 59.4
arahy.Tifrunner.gnm1.ann1.S2PB51 Arachis hypogaea HOM05D002775 ORTHO05D003262 4.7e-23 112.1 79 67.1
COL.COLO4_20629 Corchorus olitorius HOM05D002775 ORTHO05D003262 4.7e-23 112.1 91 61.5
Duzib128G1018 Durio zibethinus HOM05D002775 ORTHO05D003262 4.7e-23 112.1 125 48.8
FvH4_6g25490 Fragaria vesca HOM05D002775 ORTHO05D003262 4.7e-23 112.1 79 67.1
FAN02G3594 Fragaria x ananassa HOM05D002775 ORTHO05D003262 4.7e-23 112.1 79 67.1
FAN05G2772 Fragaria x ananassa HOM05D002775 ORTHO05D003262 4.7e-23 112.1 79 67.1
Manes.08G058400 Manihot esculenta HOM05D002775 ORTHO05D003262 4.7e-23 112.1 74 71.6
Aqoxy1G00357 Aquilegia oxysepala HOM05D002775 ORTHO05D003262 6.1e-23 111.7 94 62.8
MELO3C009765.2 Cucumis melo HOM05D002775 ORTHO05D003262 6.1e-23 111.7 74 71.6
Nn7g36669 Nelumbo nucifera HOM05D002775 ORTHO05D003262 6.1e-23 111.7 74 70.3
Sed0003281 Sechium edule HOM05D002775 ORTHO05D003262 6.1e-23 111.7 113 54.0
Cfa020016 Carpinus fangiana HOM05D002775 ORTHO05D003262 8.0e-23 111.3 74 70.3
CiPaw.10G039500 Carya illinoinensis HOM05D002775 ORTHO05D003262 8.0e-23 111.3 74 70.3
PGR031G2172 Punica granatum HOM05D002775 ORTHO05D003262 8.0e-23 111.3 74 71.6
Sed0003461 Sechium edule HOM05D002775 ORTHO05D003262 8.0e-23 111.3 74 73.0
TWI77G0151 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 8.0e-23 111.3 74 71.6
ATR0745G031 Amborella trichopoda HOM05D002775 ORTHO05D003262 1.0e-22 110.9 116 52.6
vmacro07805 Vaccinium macrocarpon HOM05D002775 ORTHO05D003262 1.0e-22 110.9 74 73.0
THA.LOC104824403 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 1.4e-22 110.5 77 68.8
CANSAT64G2189 Cannabis sativa HOM05D002775 ORTHO05D003262 1.8e-22 110.2 74 71.6
Atru.chr1.1504 Acer truncatum HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 73.0
Actinidia09266 Actinidia chinensis HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 71.6
Actinidia17943 Actinidia chinensis HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 71.6
CDE05G0954 Ceratophyllum demersum HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 71.6
Dinv09473 Davidia involucrata HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 71.6
Dinv15939 Davidia involucrata HOM05D002775 ORTHO05D003262 2.3e-22 109.8 74 71.6
Lsat_1_v5_gn_9_29601 Lactuca sativa HOM05D002775 ORTHO05D003262 3.0e-22 109.4 82 65.9
AUR62030347 Chenopodium quinoa HOM05D002775 ORTHO05D003262 4.0e-22 109.0 92 59.8
Gohir.A11G307800 Gossypium hirsutum HOM05D002775 ORTHO05D003262 4.0e-22 109.0 74 68.9
Gohir.D11G323200 Gossypium hirsutum HOM05D002775 ORTHO05D003262 4.0e-22 109.0 74 68.9
Gorai.007G353200 Gossypium raimondii HOM05D002775 ORTHO05D003262 4.0e-22 109.0 74 68.9
Hma1.2p1_0553F.1_g177770 Hydrangea macrophylla HOM05D002775 ORTHO05D003262 4.0e-22 109.0 74 71.6
Medtr7g090370 Medicago truncatula HOM05D002775 ORTHO05D003262 4.0e-22 109.0 108 51.9
THA.LOC104816223 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 4.0e-22 109.0 77 67.5
Zm00001eb017260 Zea mays HOM05D002775 ORTHO05D003262 4.0e-22 109.0 71 73.2
AUR62040835 Chenopodium quinoa HOM05D002775 ORTHO05D003262 5.2e-22 108.6 87 62.1
Eucgr.A02255 Eucalyptus grandis HOM05D002775 ORTHO05D003262 5.2e-22 108.6 74 68.9
Oeu008217.1 Olea europaea HOM05D002775 ORTHO05D003262 6.8e-22 108.2 73 71.2
TWI74G0453 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 6.8e-22 108.2 74 68.9
Aa31LG3G760 Aethionema arabicum HOM05D002775 ORTHO05D003262 1.5e-21 107.1 71 73.2
MSTRG.6374 Avicennia marina HOM05D002775 ORTHO05D003262 1.5e-21 107.1 73 71.2
Os03g0356498 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 1.5e-21 107.1 70 72.9
Ciclev10005563m.g Citrus clementina HOM05D002775 ORTHO05D003262 2.0e-21 106.7 74 68.9
Migut.J01666 Erythranthe guttata HOM05D002775 ORTHO05D003262 2.0e-21 106.7 73 71.2
Rhsim03G0040300 Rhododendron simsii HOM05D002775 ORTHO05D003262 2.0e-21 106.7 74 70.3
Hund24623 Selenicereus undatus HOM05D002775 ORTHO05D003262 2.6e-21 106.3 72 72.2
Cc06_g18960 Coffea canephora HOM05D002775 ORTHO05D003262 4.4e-21 105.5 93 59.1
Lj1A1096T60 Lonicera japonica HOM05D002775 ORTHO05D003262 4.4e-21 105.5 74 68.9
Lj1A1098T77 Lonicera japonica HOM05D002775 ORTHO05D003262 4.4e-21 105.5 74 68.9
CARHR136340 Cardamine hirsuta HOM05D002775 ORTHO05D003262 5.7e-21 105.1 71 71.8
PGSC0003DMG400029856 Solanum tuberosum HOM05D002775 ORTHO05D003262 5.7e-21 105.1 73 69.9
CSS0046294 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 7.5e-21 104.8 74 68.9
SalBow6G1070 Salvia bowleyana HOM05D002775 ORTHO05D003262 9.8e-21 104.4 73 69.9
Solyc10g079620.2 Solanum lycopersicum HOM05D002775 ORTHO05D003262 9.8e-21 104.4 73 68.5
HanXRQChr10g0292571 Helianthus annuus HOM05D002775 ORTHO05D003262 1.3e-20 104.0 70 71.4
Sp4g23570 Schrenkiella parvula HOM05D002775 ORTHO05D003262 1.3e-20 104.0 71 70.4
unitig_8.g4554 Utricularia gibba HOM05D002775 ORTHO05D003262 1.3e-20 104.0 73 65.8
AL4G39230 Arabidopsis lyrata HOM05D002775 ORTHO05D003262 1.7e-20 103.6 71 70.4
AT2G41250 Arabidopsis thaliana HOM05D002775 ORTHO05D003262 1.7e-20 103.6 71 70.4
Nitab4.5_0000515g0010 Nicotiana tabacum HOM05D002775 ORTHO05D003262 1.7e-20 103.6 73 68.5
Nitab4.5_0006876g0030 Nicotiana tabacum HOM05D002775 ORTHO05D003262 1.7e-20 103.6 73 68.5
Sopen10g030260 Solanum pennellii HOM05D002775 ORTHO05D003262 1.7e-20 103.6 73 68.5
BcaC02g12889 Brassica carinata HOM05D002775 ORTHO05D003262 2.2e-20 103.2 71 69.0
A04p31450 Brassica napus HOM05D002775 ORTHO05D003262 2.2e-20 103.2 80 63.8
C04p68860 Brassica napus HOM05D002775 ORTHO05D003262 2.2e-20 103.2 71 70.4
BolC4t28390H Brassica oleracea HOM05D002775 ORTHO05D003262 2.2e-20 103.2 71 70.4
BraA04t18602Z Brassica rapa HOM05D002775 ORTHO05D003262 2.2e-20 103.2 80 63.8
CAN.G641.55 Capsicum annuum HOM05D002775 ORTHO05D003262 2.8e-20 102.8 73 67.1
DCAR_020560 Daucus carota HOM05D002775 ORTHO05D003262 2.8e-20 102.8 75 68.0
ECA247G0461 Erigeron canadensis HOM05D002775 ORTHO05D003262 2.8e-20 102.8 70 70.0
Hund19104 Selenicereus undatus HOM05D002775 ORTHO05D003262 3.7e-20 102.4 72 69.4
Carub.0004s2357 Capsella rubella HOM05D002775 ORTHO05D003262 4.9e-20 102.1 71 69.0
Thhalv10016879m.g Eutrema salsugineum HOM05D002775 ORTHO05D003262 6.3e-20 101.7 71 69.0
Oeu059333.1 Olea europaea HOM05D002775 ORTHO05D003262 6.3e-20 101.7 71 69.0
Peaxi162Scf00903g00213 Petunia axillaris HOM05D002775 ORTHO05D003262 6.3e-20 101.7 71 69.0
PSO384G3781 Papaver somniferum HOM05D002775 ORTHO05D003262 8.3e-20 101.3 128 47.7
HPP92_013974 Vanilla planifolia HOM05D002775 ORTHO05D003262 8.3e-20 101.3 74 63.5
CSS0019588 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 1.4e-19 100.5 111 53.2
Os07g0659400 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 1.4e-19 100.5 74 60.8
SEGI_04308 Sequoiadendron giganteum HOM05D002775 ORTHO05D003262 7.0e-19 98.2 95 56.8
Zm00001eb329780 Zea mays HOM05D002775 ORTHO05D003262 1.6e-18 97.1 74 58.1
SMO232G0103 Selaginella moellendorffii HOM05D002775 ORTHO05D003262 2.0e-18 96.7 72 58.3
EL10Ac3g07198 Beta vulgaris HOM05D002775 ORTHO05D003262 2.7e-18 96.3 85 58.8
Ca_08411_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 2.7e-18 96.3 83 60.2
Ca_27752_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 2.7e-18 96.3 83 60.2
Zm00001eb110760 Zea mays HOM05D002775 ORTHO05D003262 2.7e-18 96.3 74 58.1
Sc19g0008240 Simmondsia chinensis HOM05D002775 ORTHO05D003262 5.9e-18 95.1 58 75.9
Ah.13g076910 Amaranthus hybridus HOM05D002775 ORTHO05D003262 1.3e-17 94.0 76 61.8
CSS0003680 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 4.3e-16 89.0 112 49.1
Rhsim03G0102000 Rhododendron simsii HOM05D002775 ORTHO05D003262 2.3e-14 83.2 74 58.1
CBR_g11177 Chara braunii HOM05D002775 ORTHO05D003262 7.8e-10 68.2 56 53.6
GSVIVG01033613001 Vitis vinifera HOM05D002775 ORTHO05D003262 3.0e-09 66.2 38 76.3
Cre09.g403750 Chlamydomonas reinhardtii HOM05D002775 ORTHO05D003262 1.6e-07 60.5 57 43.9
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 2.8e-07 59.7 81 40.7
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 2.8e-07 59.7 63 46.0
MBI05_g35453_MAGBIO Magnolia biondii HOM05D002775 ORTHO05D003262 4.0e-06 55.8 51 51.0
SEGI_07101 Sequoiadendron giganteum HOM05D002775 ORTHO05D003262 4.0e-06 55.8 67 46.3
Mapoly0061s0059 Marchantia polymorpha HOM05D002775 ORTHO05D003262 6.8e-06 55.1 58 48.3


User provided reference genes

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