Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13349 Sapria himalayana HOM05D005133 ORTHO05D006685 6.1e-71 270.8 143 100.0
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 4.7e-31 138.3 143 55.9
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 5.2e-30 134.8 136 55.1
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 2.0e-29 132.9 142 50.7
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 5.8e-29 131.3 141 52.5
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 7.5e-29 131.0 142 50.0
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 7.5e-29 131.0 142 50.7
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 9.8e-29 130.6 142 50.0
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 2.2e-28 129.4 143 52.4
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 2.2e-28 129.4 143 50.3
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 2.9e-28 129.0 141 51.8
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.9e-28 129.0 141 51.8
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.9e-28 129.0 141 51.8
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 2.9e-28 129.0 141 53.2
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 3.7e-28 128.6 142 49.3
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 4.9e-28 128.3 143 51.0
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 4.9e-28 128.3 142 50.0
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 4.9e-28 128.3 141 51.8
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 6.4e-28 127.9 141 48.2
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 6.4e-28 127.9 141 51.8
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 6.4e-28 127.9 141 51.8
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 1.1e-27 127.1 143 52.4
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 1.4e-27 126.7 142 50.0
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.4e-27 126.7 104 61.5
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 1.4e-27 126.7 142 49.3
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 1.8e-27 126.3 142 48.6
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 2.4e-27 125.9 143 49.7
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 4.1e-27 125.2 142 49.3
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 4.1e-27 125.2 142 49.3
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 4.1e-27 125.2 143 49.0
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 9.2e-27 124.0 144 51.4
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 9.2e-27 124.0 144 51.4
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 1.6e-26 123.2 112 56.2
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 1.6e-26 123.2 146 50.0
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.6e-26 123.2 143 48.3
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 2.7e-26 122.5 143 49.7
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 2.7e-26 122.5 146 50.7
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 3.5e-26 122.1 142 47.2
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 3.5e-26 122.1 142 47.9
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 4.6e-26 121.7 140 50.0
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 4.6e-26 121.7 143 49.7
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.0e-25 120.6 143 49.0
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.0e-25 120.6 143 49.0
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 1.0e-25 120.6 141 51.1
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.0e-25 120.6 141 49.6
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 1.3e-25 120.2 142 47.9
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 1.7e-25 119.8 143 49.0
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 2.3e-25 119.4 140 49.3
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 2.3e-25 119.4 143 46.9
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 2.3e-25 119.4 142 50.0
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.0e-25 119.0 143 46.9
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 3.9e-25 118.6 143 47.6
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 3.9e-25 118.6 141 48.9
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 5.0e-25 118.2 143 47.6
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 5.0e-25 118.2 141 47.5
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 8.6e-25 117.5 141 46.8
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 8.6e-25 117.5 140 47.9
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 1.1e-24 117.1 141 46.8
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 1.5e-24 116.7 143 46.9
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 1.5e-24 116.7 142 47.9
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.5e-24 116.7 143 46.2
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 1.5e-24 116.7 142 45.1
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 1.9e-24 116.3 141 46.1
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 1.9e-24 116.3 141 47.5
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.5e-24 115.9 142 47.9
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 2.5e-24 115.9 143 43.4
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 3.3e-24 115.5 136 47.1
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 4.3e-24 115.2 143 44.8
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 5.6e-24 114.8 141 47.5
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 5.6e-24 114.8 141 45.4
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 5.6e-24 114.8 144 47.2
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 7.3e-24 114.4 141 46.8
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 9.5e-24 114.0 104 54.8
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 9.5e-24 114.0 142 47.2
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 1.2e-23 113.6 141 46.1
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 1.6e-23 113.2 142 45.1
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.1e-23 112.8 143 47.6
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.8e-23 112.5 142 46.5
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.8e-23 112.5 150 43.3
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 3.6e-23 112.1 141 44.7
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 3.6e-23 112.1 141 48.2
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 3.6e-23 112.1 143 44.1
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 4.7e-23 111.7 102 55.9
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 4.7e-23 111.7 141 45.4
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 6.2e-23 111.3 104 54.8
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 6.2e-23 111.3 143 46.2
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 8.0e-23 110.9 141 48.2
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 8.0e-23 110.9 141 47.5
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 1.4e-22 110.2 143 47.6
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.4e-22 110.2 144 47.9
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 1.8e-22 109.8 141 42.6
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 1.8e-22 109.8 144 43.8
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 3.1e-22 109.0 148 39.9
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 3.1e-22 109.0 104 52.9
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 3.1e-22 109.0 132 48.5
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 4.0e-22 108.6 141 46.1
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 4.0e-22 108.6 143 44.8
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 8.9e-22 107.5 143 41.3
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 8.9e-22 107.5 148 42.6
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.2e-21 107.1 144 45.8
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 5.8e-21 104.8 143 42.7
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 7.5e-21 104.4 133 45.9
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 1.3e-20 103.6 142 45.1
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 2.2e-20 102.8 143 44.8
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 2.9e-20 102.4 134 43.3
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 6.4e-20 101.3 103 49.5
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 2.4e-19 99.4 101 49.5
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 2.4e-19 99.4 142 46.5
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 5.4e-19 98.2 144 41.0
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 5.0e-17 91.7 153 37.9
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 1.9e-16 89.7 98 46.9
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 2.5e-16 89.4 107 45.8
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 5.6e-16 88.2 68 66.2
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 7.3e-16 87.8 141 43.3
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 9.5e-16 87.4 98 45.9
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 9.5e-16 87.4 98 45.9
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 2.0e-13 79.7 140 38.6
vmacro01745 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 4.4e-13 78.6 111 46.8
AUR62025074 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.2e-12 76.3 64 62.5
Gohir.A03G093200 Gossypium hirsutum HOM05D005133 ORTHO05D006685 3.7e-12 75.5 111 42.3
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 1.7e-09 66.6 98 40.8
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 1.5e-08 63.5 97 42.3
HanXRQChr04g0107751 Helianthus annuus HOM05D005133 ORTHO05D006685 8.1e-07 57.8 52 55.8


User provided reference genes

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