Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 2.3e-34 148.3 71 100.0
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 8.9e-23 109.8 70 75.7
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 9.8e-22 106.3 65 75.4
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 4.9e-21 104.0 65 76.9
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 3.5e-19 97.8 63 76.2
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 6.0e-19 97.1 68 63.2
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 6.0e-19 97.1 65 70.8
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 7.8e-19 96.7 65 66.2
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 3.0e-18 94.7 63 73.0
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 3.9e-18 94.4 63 74.6
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.9e-18 94.4 63 71.4
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.9e-18 94.4 63 71.4
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 5.1e-18 94.0 63 71.4
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 6.6e-18 93.6 63 71.4
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 6.6e-18 93.6 65 69.2
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 8.6e-18 93.2 65 64.6
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 8.6e-18 93.2 65 64.6
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 8.6e-18 93.2 65 64.6
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 8.6e-18 93.2 63 71.4
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.1e-17 92.8 61 73.8
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 1.1e-17 92.8 65 69.2
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.5e-17 92.4 65 67.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 1.5e-17 92.4 63 71.4
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 1.5e-17 92.4 65 64.6
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 66.2
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-17 92.0 65 67.7
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 2.5e-17 91.7 65 67.7
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 2.5e-17 91.7 65 64.6
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 3.3e-17 91.3 59 71.2
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 3.3e-17 91.3 63 69.8
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 4.3e-17 90.9 65 63.1
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 4.3e-17 90.9 65 64.6
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 4.3e-17 90.9 66 68.2
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.3e-17 90.9 62 71.0
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 5.6e-17 90.5 65 63.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 5.6e-17 90.5 59 74.6
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 5.6e-17 90.5 65 67.7
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 5.6e-17 90.5 65 66.2
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 5.6e-17 90.5 65 67.7
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 5.6e-17 90.5 62 67.7
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.3e-17 90.1 65 66.2
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 7.3e-17 90.1 65 63.1
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 7.3e-17 90.1 64 65.6
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 9.5e-17 89.7 65 67.7
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.2e-16 89.4 63 65.1
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.2e-16 89.4 63 68.3
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.6e-16 89.0 65 61.5
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 1.6e-16 89.0 65 61.5
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 2.1e-16 88.6 64 62.5
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 2.8e-16 88.2 65 63.1
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 3.6e-16 87.8 63 68.3
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 4.7e-16 87.4 63 68.3
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 4.7e-16 87.4 59 72.9
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.7e-16 87.4 65 63.1
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 6.2e-16 87.0 65 63.1
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.2e-16 87.0 64 62.5
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 8.1e-16 86.7 63 65.1
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 8.1e-16 86.7 65 60.0
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.1e-15 86.3 65 56.9
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.4e-15 85.9 65 60.0
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.8e-15 85.5 65 56.9
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.3e-15 85.1 64 56.2
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.3e-15 85.1 65 60.0
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 4.0e-15 84.3 65 58.5
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 4.0e-15 84.3 65 60.0
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 4.0e-15 84.3 65 53.8
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 5.2e-15 84.0 65 61.5
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 6.8e-15 83.6 59 64.4
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.2e-14 82.8 65 61.5
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.2e-14 82.8 63 58.7
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.0e-14 82.0 68 57.4
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 2.0e-14 82.0 66 56.1
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 2.0e-14 82.0 66 56.1
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.6e-14 81.6 65 61.5
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.6e-14 81.6 63 58.7
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 3.4e-14 81.3 65 61.5
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 4.4e-14 80.9 63 63.5
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 5.8e-14 80.5 63 60.3
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.3e-13 79.3 63 57.1
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 1.7e-13 79.0 65 60.0
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 3.7e-13 77.8 63 57.1
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 8.3e-13 76.6 65 56.9
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 1.1e-12 76.3 67 61.2
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-12 75.5 54 63.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 3.2e-12 74.7 64 60.9
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 3.2e-12 74.7 64 60.9
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 5.4e-12 73.9 64 57.8
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 9.2e-12 73.2 63 58.7
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 3.5e-11 71.2 63 50.8
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 7.8e-11 70.1 65 58.5
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 7.8e-11 70.1 62 53.2
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.7e-10 68.9 63 58.7
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.7e-10 68.9 65 58.5
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.3e-10 68.6 63 49.2
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 4.7e-08 60.8 65 44.6
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 2.4e-07 58.5 37 70.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 4.0e-07 57.8 38 65.8
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 4.0e-07 57.8 65 43.1
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 8.9e-07 56.6 38 65.8
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.2e-06 56.2 36 66.7
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.4e-06 54.7 98 34.7
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 5.8e-06 53.9 37 59.5
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 7.6e-06 53.5 35 68.6


User provided reference genes

Program Settings