Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 8.4e-154 547.0 272 100.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.7e-59 233.0 164 62.2
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 8.6e-58 228.0 168 60.7
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.0e-55 221.1 169 56.8
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 8.9e-55 218.0 268 41.8
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.2e-53 213.4 268 42.2
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.4e-52 210.7 166 55.4
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 7.0e-52 208.4 169 56.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 7.0e-52 208.4 178 55.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.2e-52 208.0 166 55.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.2e-52 208.0 166 55.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.2e-51 207.6 161 54.7
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.2e-51 207.6 164 58.5
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 3.5e-51 206.1 164 56.1
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 4.6e-51 205.7 164 55.5
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 4.6e-51 205.7 164 54.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 4.6e-51 205.7 164 56.1
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.0e-50 204.5 164 54.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.7e-50 203.8 166 56.0
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.0e-50 203.0 168 53.0
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.9e-50 202.6 172 52.3
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 3.9e-50 202.6 166 56.0
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 1.5e-49 200.7 166 53.0
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 9.5e-49 198.0 168 53.6
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 1.6e-48 197.2 168 55.4
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.1e-48 196.8 270 39.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 6.2e-48 195.3 270 38.5
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 8.1e-48 194.9 270 38.9
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 1.1e-47 194.5 268 38.8
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.1e-47 194.5 168 50.6
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.4e-47 194.1 165 57.0
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.3e-47 193.4 270 38.9
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.3e-47 193.4 168 53.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 6.8e-47 191.8 165 55.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 2.0e-46 190.3 200 47.0
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 9.8e-46 188.0 179 49.2
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 9.8e-46 188.0 269 40.1
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.7e-45 187.2 170 51.8
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.2e-45 186.8 186 46.8
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 3.7e-45 186.0 170 52.4
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 4.9e-45 185.7 166 52.4
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 8.3e-45 184.9 164 48.8
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.9e-44 183.7 155 55.5
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 4.1e-44 182.6 166 50.0
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 5.4e-44 182.2 211 43.6
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 9.2e-44 181.4 162 51.2
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 2.7e-43 179.9 150 54.0
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 6.0e-43 178.7 164 51.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 7.8e-43 178.3 185 46.5
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 7.8e-43 178.3 162 53.1
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 7.8e-43 178.3 191 42.4
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.7e-42 177.2 185 46.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.7e-42 177.2 166 51.2
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 2.3e-42 176.8 166 48.8
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 3.0e-42 176.4 211 41.7
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.1e-41 174.5 166 49.4
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 2.5e-41 173.3 191 42.9
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 4.3e-41 172.6 163 49.1
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 7.3e-41 171.8 191 42.4
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 9.5e-41 171.4 168 47.6
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.2e-40 171.0 275 37.5
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.2e-40 171.0 270 35.9
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 1.2e-40 171.0 184 46.2
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.8e-40 169.9 270 35.9
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.8e-40 169.9 163 48.5
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 4.7e-40 169.1 163 48.5
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.7e-40 169.1 166 47.6
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.7e-40 169.1 191 41.4
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 6.2e-40 168.7 258 37.6
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 8.1e-40 168.3 171 47.4
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 8.1e-40 168.3 171 45.0
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.3e-39 166.8 166 47.0
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 4.0e-39 166.0 192 40.6
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.0e-39 166.0 171 46.8
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.0e-39 166.0 171 46.8
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 6.8e-39 165.2 171 46.8
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.2e-38 164.5 193 40.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.2e-38 164.5 171 45.0
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.6e-38 163.3 171 46.2
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 3.4e-38 162.9 185 43.2
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.4e-38 162.9 191 41.4
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 1.3e-37 161.0 166 45.8
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 4.1e-36 156.0 270 35.9
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 4.1e-36 156.0 258 36.0
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.5e-35 152.9 166 44.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 2.3e-34 150.2 166 43.4
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.3e-34 150.2 191 41.4
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 3.0e-34 149.8 196 41.3
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 4.3e-33 146.0 165 42.4
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 3.6e-32 142.9 172 41.3
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.6e-27 127.5 91 58.2
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 8.1e-24 115.2 118 43.2
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 9.0e-23 111.7 83 54.2
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.5e-22 110.9 89 55.1
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 2.0e-22 110.5 70 62.9
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 7.6e-22 108.6 120 43.3
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.1e-20 104.8 108 44.4
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.9e-20 104.0 203 35.0
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.5e-19 99.8 86 51.2
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.8e-16 90.1 61 67.2
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 2.4e-15 87.0 102 39.2
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 9.0e-15 85.1 249 28.9
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.7e-13 80.9 80 48.8
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 9.3e-12 75.1 212 26.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 4.3e-09 66.2 74 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.5e-06 57.8 169 23.1


User provided reference genes

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