Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12605 Sapria himalayana HOM05D005973 ORTHO05D007285 1.3e-252 875.9 453 100.0
SHI03956 Sapria himalayana HOM05D005973 ORTHO05D007285 4.5e-43 179.9 153 70.6
SHI03959 Sapria himalayana HOM05D005973 ORTHO05D007285 9.3e-33 145.6 136 60.3
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 5.3e-28 129.8 152 52.6
arahy.Tifrunner.gnm1.ann1.9Z0TAG Arachis hypogaea HOM05D005973 ORTHO05D007285 2.9e-26 124.0 170 48.2
arahy.Tifrunner.gnm1.ann1.P50PF0 Arachis hypogaea HOM05D005973 ORTHO05D007285 4.2e-25 120.2 170 47.1
Atru.BG.296.p Acer truncatum HOM05D005973 ORTHO05D007285 9.4e-25 119.0 207 39.6
Potri.003G203100 Populus trichocarpa HOM05D005973 ORTHO05D007285 9.4e-25 119.0 154 51.9
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 4.6e-24 116.7 152 51.3
Sabra03G0150000 Salix brachista HOM05D005973 ORTHO05D007285 6.1e-24 116.3 154 50.6
Lj3g0002161 Lotus japonicus HOM05D005973 ORTHO05D007285 1.8e-23 114.8 190 43.7
QL05p089319 Quercus lobata HOM05D005973 ORTHO05D007285 3.9e-23 113.6 155 47.1
CiPaw.04G079400 Carya illinoinensis HOM05D005973 ORTHO05D007285 4.3e-22 110.2 153 47.1
Ciclev10030824m.g Citrus clementina HOM05D005973 ORTHO05D007285 4.3e-22 110.2 152 48.0
QL09p040247 Quercus lobata HOM05D005973 ORTHO05D007285 5.7e-22 109.8 152 47.4
Gohir.D06G164800 Gossypium hirsutum HOM05D005973 ORTHO05D007285 1.7e-21 108.2 152 46.1
Prupe.2G027000 Prunus persica HOM05D005973 ORTHO05D007285 1.7e-21 108.2 152 44.7
Duzib106G0003 Durio zibethinus HOM05D005973 ORTHO05D007285 2.2e-21 107.8 151 47.0
Gorai.010G192200 Gossypium raimondii HOM05D005973 ORTHO05D007285 2.8e-21 107.5 152 46.1
Thecc.10G003600 Theobroma cacao HOM05D005973 ORTHO05D007285 2.8e-21 107.5 151 44.4
TPR.G2735 Trifolium pratense HOM05D005973 ORTHO05D007285 4.8e-21 106.7 198 38.4
COL.COLO4_19343 Corchorus olitorius HOM05D005973 ORTHO05D007285 1.1e-20 105.5 150 45.3
Gohir.A06G158900 Gossypium hirsutum HOM05D005973 ORTHO05D007285 1.1e-20 105.5 169 43.8
GSVIVG01000864001 Vitis vinifera HOM05D005973 ORTHO05D007285 1.4e-20 105.1 153 45.8
Lj7A578T58 Lonicera japonica HOM05D005973 ORTHO05D007285 1.8e-20 104.8 155 47.7
Lalb_Chr25g0282721 Lupinus albus HOM05D005973 ORTHO05D007285 1.8e-20 104.8 185 42.7
Psat7g241480 Pisum sativum HOM05D005973 ORTHO05D007285 2.4e-20 104.4 189 40.2
Oeu027349.1 Olea europaea HOM05D005973 ORTHO05D007285 3.1e-20 104.0 154 44.8
QL10p041196 Quercus lobata HOM05D005973 ORTHO05D007285 5.3e-20 103.2 152 45.4
CAN.G410.36 Capsicum annuum HOM05D005973 ORTHO05D007285 6.9e-20 102.8 153 42.5
Ca_09585_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 1.2e-19 102.1 154 44.2
Phvul.005G033500 Phaseolus vulgaris HOM05D005973 ORTHO05D007285 4.5e-19 100.1 190 42.6
Nitab4.5_0001775g0060 Nicotiana tabacum HOM05D005973 ORTHO05D007285 7.7e-19 99.4 153 40.5
SGA_v2.0_scaffold354G49737 Striga asiatica HOM05D005973 ORTHO05D007285 7.7e-19 99.4 154 44.2
Cfa002200 Carpinus fangiana HOM05D005973 ORTHO05D007285 1.0e-18 99.0 159 43.4
Ca_25879_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 1.3e-18 98.6 154 42.9
Rhsim05G0126600 Rhododendron simsii HOM05D005973 ORTHO05D007285 1.7e-18 98.2 152 43.4
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 2.2e-18 97.8 177 39.0
Hma1.2p1_0579F.1_g182710 Hydrangea macrophylla HOM05D005973 ORTHO05D007285 2.9e-18 97.4 152 44.1
Hma1.2p1_0579F.1_g182720 Hydrangea macrophylla HOM05D005973 ORTHO05D007285 2.9e-18 97.4 152 44.1
Nitab4.5_0000316g0260 Nicotiana tabacum HOM05D005973 ORTHO05D007285 2.9e-18 97.4 153 40.5
TAR624G0512 Trochodendron aralioides HOM05D005973 ORTHO05D007285 5.0e-18 96.7 153 39.2
Cc09_g07760 Coffea canephora HOM05D005973 ORTHO05D007285 6.5e-18 96.3 153 43.8
MD07G1026900 Malus domestica HOM05D005973 ORTHO05D007285 8.5e-18 95.9 151 42.4
AT4G20740 Arabidopsis thaliana HOM05D005973 ORTHO05D007285 1.1e-17 95.5 151 40.4
FvH4_7g02120 Fragaria vesca HOM05D005973 ORTHO05D007285 3.2e-17 94.0 152 41.4
Medtr3g023180 Medicago truncatula HOM05D005973 ORTHO05D007285 3.2e-17 94.0 165 42.4
Atru.chr10.2008 Acer truncatum HOM05D005973 ORTHO05D007285 4.2e-17 93.6 138 45.7
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 5.5e-17 93.2 158 39.9
AL7G33400 Arabidopsis lyrata HOM05D005973 ORTHO05D007285 9.4e-17 92.4 150 39.3
ECA248G3068 Erigeron canadensis HOM05D005973 ORTHO05D007285 1.6e-16 91.7 163 37.4
Eucgr.C02304 Eucalyptus grandis HOM05D005973 ORTHO05D007285 1.6e-16 91.7 155 44.5
PSO339G1208 Papaver somniferum HOM05D005973 ORTHO05D007285 1.6e-16 91.7 155 40.6
MELO3C005140.2 Cucumis melo HOM05D005973 ORTHO05D007285 2.7e-16 90.9 151 39.7
Carub.0007s2070 Capsella rubella HOM05D005973 ORTHO05D007285 3.6e-16 90.5 152 38.2
FAN06G2970 Fragaria x ananassa HOM05D005973 ORTHO05D007285 3.6e-16 90.5 152 40.8
CsaV3_5G024580 Cucumis sativus L. HOM05D005973 ORTHO05D007285 4.7e-16 90.1 151 39.1
FAN03G2603 Fragaria x ananassa HOM05D005973 ORTHO05D007285 4.7e-16 90.1 152 40.8
MSTRG.27162 Avicennia marina HOM05D005973 ORTHO05D007285 7.9e-16 89.4 154 39.0
Eucgr.C02463 Eucalyptus grandis HOM05D005973 ORTHO05D007285 7.9e-16 89.4 155 43.9
Thhalv10024515m.g Eutrema salsugineum HOM05D005973 ORTHO05D007285 7.9e-16 89.4 147 39.5
Sp7g18820 Schrenkiella parvula HOM05D005973 ORTHO05D007285 1.0e-15 89.0 150 39.3
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 1.4e-15 88.6 169 39.1
Eucgr.J01726 Eucalyptus grandis HOM05D005973 ORTHO05D007285 1.4e-15 88.6 152 43.4
RcHm_v2.0_Chr1g0319391 Rosa chinensis HOM05D005973 ORTHO05D007285 1.4e-15 88.6 152 40.1
ClCG01G007570 Citrullus lanatus HOM05D005973 ORTHO05D007285 1.8e-15 88.2 153 39.2
TAR623G1116 Trochodendron aralioides HOM05D005973 ORTHO05D007285 1.8e-15 88.2 176 32.4
Sopen01g030120 Solanum pennellii HOM05D005973 ORTHO05D007285 3.0e-15 87.4 153 39.2
BraA01t01158Z Brassica rapa HOM05D005973 ORTHO05D007285 5.1e-15 86.7 187 34.8
TAR623G1644 Trochodendron aralioides HOM05D005973 ORTHO05D007285 5.1e-15 86.7 152 37.5
Solyc01g068180.3 Solanum lycopersicum HOM05D005973 ORTHO05D007285 6.7e-15 86.3 154 37.0
CARHR227290 Cardamine hirsuta HOM05D005973 ORTHO05D007285 8.8e-15 85.9 144 38.2
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 1.1e-14 85.5 169 37.3
Actinidia21529 Actinidia chinensis HOM05D005973 ORTHO05D007285 1.5e-14 85.1 208 34.1
ATR0820G217 Amborella trichopoda HOM05D005973 ORTHO05D007285 1.5e-14 85.1 171 37.4
THA.LOC104812083 Tarenaya hassleriana HOM05D005973 ORTHO05D007285 1.5e-14 85.1 153 38.6
BcaNung04156 Brassica carinata HOM05D005973 ORTHO05D007285 2.0e-14 84.7 203 32.0
PGR031G1457 Punica granatum HOM05D005973 ORTHO05D007285 2.0e-14 84.7 153 39.2
Aa31LG6G2840 Aethionema arabicum HOM05D005973 ORTHO05D007285 2.6e-14 84.3 148 40.5
Dinv05038 Davidia involucrata HOM05D005973 ORTHO05D007285 3.3e-14 84.0 152 40.8
C01p14480 Brassica napus HOM05D005973 ORTHO05D007285 4.4e-14 83.6 150 36.7
Dinv03571 Davidia involucrata HOM05D005973 ORTHO05D007285 9.7e-14 82.4 152 40.1
SalBow6G5404 Salvia bowleyana HOM05D005973 ORTHO05D007285 9.7e-14 82.4 169 37.3
BolC1t01403H Brassica oleracea HOM05D005973 ORTHO05D007285 1.3e-13 82.0 150 36.0
PSO384G2338 Papaver somniferum HOM05D005973 ORTHO05D007285 2.2e-13 81.3 154 40.3
TAR623G1677 Trochodendron aralioides HOM05D005973 ORTHO05D007285 2.2e-13 81.3 153 37.9
Aa31LG9G8720 Aethionema arabicum HOM05D005973 ORTHO05D007285 2.8e-13 80.9 147 38.8
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 2.8e-13 80.9 180 35.6
Migut.N01822 Erythranthe guttata HOM05D005973 ORTHO05D007285 2.8e-13 80.9 154 36.4
Sed0021022 Sechium edule HOM05D005973 ORTHO05D007285 2.8e-13 80.9 157 36.9
A01p12160 Brassica napus HOM05D005973 ORTHO05D007285 4.8e-13 80.1 192 32.3
BcaC09g51316 Brassica carinata HOM05D005973 ORTHO05D007285 6.3e-13 79.7 150 35.3
Peaxi162Scf00087g00126 Petunia axillaris HOM05D005973 ORTHO05D007285 1.4e-12 78.6 153 37.3
FAN10G2343 Fragaria x ananassa HOM05D005973 ORTHO05D007285 1.8e-12 78.2 152 38.8
VMungo1080G0196 Vigna mungo HOM05D005973 ORTHO05D007285 1.8e-12 78.2 101 50.5
CANSAT80G0799 Cannabis sativa HOM05D005973 ORTHO05D007285 2.4e-12 77.8 170 35.3
CDE07G0106 Ceratophyllum demersum HOM05D005973 ORTHO05D007285 3.1e-12 77.4 148 40.5
HPP92_000751 Vanilla planifolia HOM05D005973 ORTHO05D007285 5.3e-12 76.6 162 33.3
Sc14g0005840 Simmondsia chinensis HOM05D005973 ORTHO05D007285 1.5e-11 75.1 169 33.7
CSS0008088 Camellia sinensis var. sinensis HOM05D005973 ORTHO05D007285 2.0e-11 74.7 181 34.8
Nn3g17081 Nelumbo nucifera HOM05D005973 ORTHO05D007285 2.6e-11 74.3 167 34.7
Nn3g17082 Nelumbo nucifera HOM05D005973 ORTHO05D007285 2.6e-11 74.3 167 34.7
CSS0029678 Camellia sinensis var. sinensis HOM05D005973 ORTHO05D007285 3.5e-11 73.9 181 34.3
DCAR_025034 Daucus carota HOM05D005973 ORTHO05D007285 5.9e-11 73.2 168 34.5
Glyma.06G236700 Glycine max HOM05D005973 ORTHO05D007285 1.3e-10 72.0 84 52.4
vmacro19755 Vaccinium macrocarpon HOM05D005973 ORTHO05D007285 1.7e-10 71.6 152 35.5
Os07g0179000 Oryza sativa ssp. japonica HOM05D005973 ORTHO05D007285 2.9e-10 70.9 130 36.9
Glyma.20G097200 Glycine max HOM05D005973 ORTHO05D007285 5.0e-10 70.1 151 35.8
PGSC0003DMG400006820 Solanum tuberosum HOM05D005973 ORTHO05D007285 1.1e-09 68.9 152 32.9
Glyma.20G115000 Glycine max HOM05D005973 ORTHO05D007285 1.9e-09 68.2 151 34.4
Zm00001eb301300 Zea mays HOM05D005973 ORTHO05D007285 2.1e-08 64.7 204 30.4
Aqoxy2G00263 Aquilegia oxysepala HOM05D005973 ORTHO05D007285 2.7e-08 64.3 71 52.1
Lsat_1_v5_gn_1_100901 Lactuca sativa HOM05D005973 ORTHO05D007285 4.7e-08 63.5 155 32.3
EL10Ac2g03340 Beta vulgaris HOM05D005973 ORTHO05D007285 3.3e-06 57.4 118 35.6


User provided reference genes

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