Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12275 Sapria himalayana HOM05D004369 ORTHO05D004907 1.4e-184 649.4 328 100.0
Psat0ss9348g0120 Pisum sativum HOM05D004369 ORTHO05D004907 1.6e-13 81.3 167 36.5
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 2.0e-13 80.9 133 45.9
Sabra06G0021600 Salix brachista HOM05D004369 ORTHO05D004907 2.7e-13 80.5 163 41.1
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 1.3e-12 78.2 147 42.9
Potri.006G032300 Populus trichocarpa HOM05D004369 ORTHO05D004907 1.3e-12 78.2 170 40.6
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 1.7e-12 77.8 171 36.8
Duzib106G1975 Durio zibethinus HOM05D004369 ORTHO05D004907 1.7e-12 77.8 231 36.4
Atru.chr1.1512 Acer truncatum HOM05D004369 ORTHO05D004907 2.3e-12 77.4 132 43.9
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 3.0e-12 77.0 214 35.5
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 5.0e-12 76.3 155 40.6
Medtr7g088620 Medicago truncatula HOM05D004369 ORTHO05D004907 8.6e-12 75.5 142 38.7
Thecc.05G119700 Theobroma cacao HOM05D004369 ORTHO05D004907 1.1e-11 75.1 134 42.5
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 1.5e-11 74.7 108 49.1
Carub.0004s2334 Capsella rubella HOM05D004369 ORTHO05D004907 1.9e-11 74.3 133 37.6
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 1.9e-11 74.3 133 43.6
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 2.5e-11 73.9 130 43.8
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 2.5e-11 73.9 81 54.3
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 3.3e-11 73.6 129 45.0
CARHR136130 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.3e-11 73.2 139 41.0
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 4.3e-11 73.2 149 38.3
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 5.6e-11 72.8 166 36.1
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 5.6e-11 72.8 134 43.3
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 7.3e-11 72.4 130 43.1
QL07p014155 Quercus lobata HOM05D004369 ORTHO05D004907 7.3e-11 72.4 89 50.6
CiPaw.09G052400 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.2e-10 71.6 167 37.7
Duzib128G0931 Durio zibethinus HOM05D004369 ORTHO05D004907 1.6e-10 71.2 147 40.8
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 2.1e-10 70.9 140 41.4
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 2.1e-10 70.9 208 35.1
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 2.8e-10 70.5 134 40.3
Glyma.03G120700 Glycine max HOM05D004369 ORTHO05D004907 3.6e-10 70.1 163 39.3
Lalb_Chr22g0357981 Lupinus albus HOM05D004369 ORTHO05D004907 3.6e-10 70.1 110 44.5
AUR62018430 Chenopodium quinoa HOM05D004369 ORTHO05D004907 4.7e-10 69.7 83 50.6
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.7e-10 69.7 87 50.6
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 4.7e-10 69.7 87 50.6
Nn7g37071 Nelumbo nucifera HOM05D004369 ORTHO05D004907 4.7e-10 69.7 83 51.8
Oeu009515.1 Olea europaea HOM05D004369 ORTHO05D004907 4.7e-10 69.7 93 50.5
THA.LOC104815333 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 4.7e-10 69.7 135 37.0
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 6.2e-10 69.3 81 53.1
FAN09G2868 Fragaria x ananassa HOM05D004369 ORTHO05D004907 6.2e-10 69.3 167 34.7
Nitab4.5_0001270g0170 Nicotiana tabacum HOM05D004369 ORTHO05D004907 6.2e-10 69.3 183 32.2
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 6.2e-10 69.3 103 47.6
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 6.2e-10 69.3 103 47.6
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 8.0e-10 68.9 87 49.4
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 8.0e-10 68.9 197 35.0
PGSC0003DMG400007200 Solanum tuberosum HOM05D004369 ORTHO05D004907 8.0e-10 68.9 179 34.6
VMungo1383G1978 Vigna mungo HOM05D004369 ORTHO05D004907 8.0e-10 68.9 103 47.6
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.0e-09 68.6 87 51.7
Sc19g0007900 Simmondsia chinensis HOM05D004369 ORTHO05D004907 1.0e-09 68.6 76 55.3
AUR62021003 Chenopodium quinoa HOM05D004369 ORTHO05D004907 1.4e-09 68.2 80 50.0
Glyma.19G125300 Glycine max HOM05D004369 ORTHO05D004907 1.4e-09 68.2 85 54.1
DCAR_013523 Daucus carota HOM05D004369 ORTHO05D004907 1.8e-09 67.8 129 39.5
MBI13_g13129_MAGBIO Magnolia biondii HOM05D004369 ORTHO05D004907 1.8e-09 67.8 128 39.8
Sp4g23330 Schrenkiella parvula HOM05D004369 ORTHO05D004907 1.8e-09 67.8 139 35.3
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 2.3e-09 67.4 86 47.7
CANSAT80G1482 Cannabis sativa HOM05D004369 ORTHO05D004907 2.3e-09 67.4 82 54.9
CiPaw.10G044100 Carya illinoinensis HOM05D004369 ORTHO05D004907 2.3e-09 67.4 87 52.9
FvH4_6g07790 Fragaria vesca HOM05D004369 ORTHO05D004907 2.3e-09 67.4 169 36.1
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 2.3e-09 67.4 169 36.7
Ah.04g150390 Amaranthus hybridus HOM05D004369 ORTHO05D004907 3.1e-09 67.0 83 49.4
DCAR_020610 Daucus carota HOM05D004369 ORTHO05D004907 3.1e-09 67.0 131 38.9
TPR.G22743 Trifolium pratense HOM05D004369 ORTHO05D004907 3.1e-09 67.0 102 46.1
Cc00_g08990 Coffea canephora HOM05D004369 ORTHO05D004907 4.0e-09 66.6 78 53.8
RcHm_v2.0_Chr3g0457501 Rosa chinensis HOM05D004369 ORTHO05D004907 4.0e-09 66.6 81 53.1
THA.LOC104803243 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 4.0e-09 66.6 101 43.6
AT2G41010 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 6.8e-09 65.9 137 36.5
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 6.8e-09 65.9 145 38.6
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 6.8e-09 65.9 159 38.4
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 6.8e-09 65.9 82 48.8
Nitab4.5_0000123g0220 Nicotiana tabacum HOM05D004369 ORTHO05D004907 8.9e-09 65.5 194 33.5
Oeu057811.1 Olea europaea HOM05D004369 ORTHO05D004907 8.9e-09 65.5 131 41.2
Solyc10g077130.1 Solanum lycopersicum HOM05D004369 ORTHO05D004907 1.2e-08 65.1 206 32.5
THA.LOC104824387 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 1.2e-08 65.1 192 31.8
TWI53G1196 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 1.2e-08 65.1 85 51.8
ECA236G2438 Erigeron canadensis HOM05D004369 ORTHO05D004907 1.5e-08 64.7 85 49.4
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.5e-08 64.7 155 38.1
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.5e-08 64.7 155 36.8
Eucgr.K01686 Eucalyptus grandis HOM05D004369 ORTHO05D004907 2.0e-08 64.3 118 42.4
AL4G38990 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 2.6e-08 63.9 93 43.0
Sopen10g028810 Solanum pennellii HOM05D004369 ORTHO05D004907 4.4e-08 63.2 174 33.3
AL5G38270 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 5.8e-08 62.8 182 33.5
Thhalv10017173m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 5.8e-08 62.8 136 36.8
Lalb_Chr14g0365411 Lupinus albus HOM05D004369 ORTHO05D004907 5.8e-08 62.8 117 41.0
A04p03590 Brassica napus HOM05D004369 ORTHO05D004907 9.8e-08 62.0 135 37.8
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 1.3e-07 61.6 142 37.3
A04p31330 Brassica napus HOM05D004369 ORTHO05D004907 1.7e-07 61.2 168 31.5
BraA04t16076Z Brassica rapa HOM05D004369 ORTHO05D004907 1.7e-07 61.2 135 37.8
Thhalv10006505m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 1.7e-07 61.2 134 37.3
Oeu023004.1 Olea europaea HOM05D004369 ORTHO05D004907 1.7e-07 61.2 130 37.7
Aa31LG10G11730 Aethionema arabicum HOM05D004369 ORTHO05D004907 2.2e-07 60.8 90 46.7
A09p49750 Brassica napus HOM05D004369 ORTHO05D004907 2.9e-07 60.5 108 44.4
BraA09t40428Z Brassica rapa HOM05D004369 ORTHO05D004907 2.9e-07 60.5 108 44.4
Ah.13g077330 Amaranthus hybridus HOM05D004369 ORTHO05D004907 3.7e-07 60.1 84 46.4
MSTRG.6296 Avicennia marina HOM05D004369 ORTHO05D004907 3.7e-07 60.1 181 35.9
BcaC07g40000 Brassica carinata HOM05D004369 ORTHO05D004907 3.7e-07 60.1 93 47.3
C08p32120 Brassica napus HOM05D004369 ORTHO05D004907 3.7e-07 60.1 93 47.3
BolC8t50831H Brassica oleracea HOM05D004369 ORTHO05D004907 3.7e-07 60.1 93 47.3
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 3.7e-07 60.1 76 47.4
CARHR167030 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.9e-07 59.7 95 45.3
CsaV3_3G039860 Cucumis sativus L. HOM05D004369 ORTHO05D004907 4.9e-07 59.7 82 50.0
Gohir.A11G305600 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.9e-07 59.7 85 48.2
Gohir.D11G321000 Gossypium hirsutum HOM05D004369 ORTHO05D004907 6.4e-07 59.3 83 49.4
PSO384G0208 Papaver somniferum HOM05D004369 ORTHO05D004907 6.4e-07 59.3 151 33.8
MELO3C009728.2 Cucumis melo HOM05D004369 ORTHO05D004907 8.3e-07 58.9 81 50.6
Lalb_Chr24g0400611 Lupinus albus HOM05D004369 ORTHO05D004907 8.3e-07 58.9 104 41.3
Sp5g05710 Schrenkiella parvula HOM05D004369 ORTHO05D004907 8.3e-07 58.9 139 35.3
CAN.G959.22 Capsicum annuum HOM05D004369 ORTHO05D004907 1.1e-06 58.5 115 40.9
PGR042G0777 Punica granatum HOM05D004369 ORTHO05D004907 1.1e-06 58.5 38 78.9
BcaC02g09876 Brassica carinata HOM05D004369 ORTHO05D004907 1.4e-06 58.2 136 34.6
C04p35650 Brassica napus HOM05D004369 ORTHO05D004907 1.4e-06 58.2 136 34.6
BolC4t25239H Brassica oleracea HOM05D004369 ORTHO05D004907 1.4e-06 58.2 136 34.6
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 1.4e-06 58.2 137 38.7
BraA04t18590Z Brassica rapa HOM05D004369 ORTHO05D004907 1.9e-06 57.8 85 44.7
CiPaw.12G092400 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.9e-06 57.8 72 54.2
Gorai.007G351200 Gossypium raimondii HOM05D004369 ORTHO05D004907 1.9e-06 57.8 83 48.2
CDE09G1065 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 2.4e-06 57.4 95 46.3
Sed0018866 Sechium edule HOM05D004369 ORTHO05D004907 2.4e-06 57.4 134 36.6
AT3G56880 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 3.2e-06 57.0 92 44.6
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 3.2e-06 57.0 85 45.9
MSTRG.26187 Avicennia marina HOM05D004369 ORTHO05D004907 3.2e-06 57.0 80 45.0
PSO339G3328 Papaver somniferum HOM05D004369 ORTHO05D004907 3.2e-06 57.0 87 44.8
unitig_21.g20674 Utricularia gibba HOM05D004369 ORTHO05D004907 4.1e-06 56.6 36 75.0
Zm00001eb128970 Zea mays HOM05D004369 ORTHO05D004907 4.1e-06 56.6 77 44.2
HanXRQChr09g0258571 Helianthus annuus HOM05D004369 ORTHO05D004907 5.4e-06 56.2 168 37.5
HPP92_012446 Vanilla planifolia HOM05D004369 ORTHO05D004907 5.4e-06 56.2 84 42.9
HanXRQChr03g0086901 Helianthus annuus HOM05D004369 ORTHO05D004907 7.0e-06 55.8 129 36.4
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 7.0e-06 55.8 84 47.6


User provided reference genes

Program Settings