Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12213 Sapria himalayana HOM05D000141 ORTHO05D004993 3.2e-119 431.8 220 100.0
RcHm_v2.0_Chr2g0111301 Rosa chinensis HOM05D000141 ORTHO05D004993 1.7e-40 170.2 134 66.4
Sabra07G0008100 Salix brachista HOM05D000141 ORTHO05D004993 1.7e-40 170.2 138 65.9
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 2.9e-40 169.5 134 66.4
Dinv13609 Davidia involucrata HOM05D000141 ORTHO05D004993 5.0e-40 168.7 139 63.3
Potri.007G010700 Populus trichocarpa HOM05D000141 ORTHO05D004993 6.5e-40 168.3 477 30.4
TWI77G1015 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 6.5e-40 168.3 134 67.2
Cpa.g.sc55.32 Carica papaya HOM05D000141 ORTHO05D004993 1.1e-39 167.5 130 68.5
CiPaw.07G048100 Carya illinoinensis HOM05D000141 ORTHO05D004993 1.1e-39 167.5 134 66.4
Dinv36919 Davidia involucrata HOM05D000141 ORTHO05D004993 1.5e-39 167.2 129 69.0
FvH4_1g19720 Fragaria vesca HOM05D000141 ORTHO05D004993 1.9e-39 166.8 134 64.9
FAN19G2112 Fragaria x ananassa HOM05D000141 ORTHO05D004993 1.9e-39 166.8 134 64.9
Manes.12G126900 Manihot esculenta HOM05D000141 ORTHO05D004993 2.5e-39 166.4 477 30.0
TWI74G0717 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 3.2e-39 166.0 138 64.5
arahy.Tifrunner.gnm1.ann1.46GERB Arachis hypogaea HOM05D000141 ORTHO05D004993 4.2e-39 165.6 138 63.8
FAN26G1575 Fragaria x ananassa HOM05D000141 ORTHO05D004993 4.2e-39 165.6 134 64.9
THA.LOC104801691 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 4.2e-39 165.6 130 66.2
Peaxi162Scf00778g00009 Petunia axillaris HOM05D000141 ORTHO05D004993 5.5e-39 165.2 134 65.7
Glyma.08G279800 Glycine max HOM05D000141 ORTHO05D004993 7.2e-39 164.9 130 67.7
Nitab4.5_0025132g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004993 7.2e-39 164.9 130 67.7
Psat4g119320 Pisum sativum HOM05D000141 ORTHO05D004993 7.2e-39 164.9 140 63.6
Thecc.01G091400 Theobroma cacao HOM05D000141 ORTHO05D004993 7.2e-39 164.9 134 65.7
Atru.chr3.1257 Acer truncatum HOM05D000141 ORTHO05D004993 9.4e-39 164.5 477 29.8
Gorai.007G233100 Gossypium raimondii HOM05D000141 ORTHO05D004993 1.2e-38 164.1 138 63.8
Rhsim10G0172400 Rhododendron simsii HOM05D000141 ORTHO05D004993 1.2e-38 164.1 134 65.7
Glyma.02G041400 Glycine max HOM05D000141 ORTHO05D004993 1.6e-38 163.7 134 64.2
Glyma.18G146600 Glycine max HOM05D000141 ORTHO05D004993 1.6e-38 163.7 130 65.4
Gohir.A11G206600 Gossypium hirsutum HOM05D000141 ORTHO05D004993 1.6e-38 163.7 138 63.8
VMungo0251G3517 Vigna mungo HOM05D000141 ORTHO05D004993 1.6e-38 163.7 130 66.2
GSVIVG01006736001 Vitis vinifera HOM05D000141 ORTHO05D004993 1.6e-38 163.7 134 66.4
Actinidia25312 Actinidia chinensis HOM05D000141 ORTHO05D004993 2.1e-38 163.3 449 30.7
Glyma.01G023600 Glycine max HOM05D000141 ORTHO05D004993 2.1e-38 163.3 130 65.4
MELO3C007717.2 Cucumis melo HOM05D000141 ORTHO05D004993 2.7e-38 162.9 138 65.2
Medtr8g471180 Medicago truncatula HOM05D000141 ORTHO05D004993 2.7e-38 162.9 130 66.9
arahy.Tifrunner.gnm1.ann1.029WE6 Arachis hypogaea HOM05D000141 ORTHO05D004993 3.6e-38 162.5 138 63.0
ClCG01G018390 Citrullus lanatus HOM05D000141 ORTHO05D004993 3.6e-38 162.5 138 64.5
Ciclev10024724m.g Citrus clementina HOM05D000141 ORTHO05D004993 3.6e-38 162.5 477 29.6
FAN28G0107 Fragaria x ananassa HOM05D000141 ORTHO05D004993 3.6e-38 162.5 134 64.2
Oeu012465.2 Olea europaea HOM05D000141 ORTHO05D004993 3.6e-38 162.5 130 66.2
Prupe.6G198800 Prunus persica HOM05D000141 ORTHO05D004993 3.6e-38 162.5 134 64.2
Sed0001145 Sechium edule HOM05D000141 ORTHO05D004993 3.6e-38 162.5 130 67.7
CSS0021935 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 4.7e-38 162.2 133 65.4
Haze_03861 Corylus avellana HOM05D000141 ORTHO05D004993 4.7e-38 162.2 134 65.7
Eucgr.I00545 Eucalyptus grandis HOM05D000141 ORTHO05D004993 4.7e-38 162.2 133 67.7
Phvul.003G289200 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 4.7e-38 162.2 130 66.2
TPR.G14602 Trifolium pratense HOM05D000141 ORTHO05D004993 4.7e-38 162.2 130 67.7
CsaV3_6G045040 Cucumis sativus L. HOM05D000141 ORTHO05D004993 6.1e-38 161.8 138 64.5
Duzib147G0545 Durio zibethinus HOM05D000141 ORTHO05D004993 6.1e-38 161.8 134 64.9
Lalb_Chr05g0228501 Lupinus albus HOM05D000141 ORTHO05D004993 6.1e-38 161.8 138 63.8
vmacro13004 Vaccinium macrocarpon HOM05D000141 ORTHO05D004993 1.4e-37 160.6 134 64.9
CANSAT54G0158 Cannabis sativa HOM05D000141 ORTHO05D004993 1.8e-37 160.2 134 64.9
MD00G1019700 Malus domestica HOM05D000141 ORTHO05D004993 1.8e-37 160.2 135 63.7
Phvul.002G147700 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 2.3e-37 159.8 134 62.7
VMungo1215G0183 Vigna mungo HOM05D000141 ORTHO05D004993 3.0e-37 159.5 134 63.4
SGA_v2.0_scaffold45G17236 Striga asiatica HOM05D000141 ORTHO05D004993 5.2e-37 158.7 127 67.7
Lalb_Chr05g0216301 Lupinus albus HOM05D000141 ORTHO05D004993 6.8e-37 158.3 130 63.8
Lj4g0027101 Lotus japonicus HOM05D000141 ORTHO05D004993 8.8e-37 157.9 129 64.3
MSTRG.15690 Avicennia marina HOM05D000141 ORTHO05D004993 1.5e-36 157.1 130 63.8
Carub.0006s0895 Capsella rubella HOM05D000141 ORTHO05D004993 1.5e-36 157.1 131 65.6
AL6G20990 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 2.0e-36 156.8 131 65.6
COL.COLO4_27349 Corchorus olitorius HOM05D000141 ORTHO05D004993 2.0e-36 156.8 136 63.2
TAR376G1001 Trochodendron aralioides HOM05D000141 ORTHO05D004993 2.6e-36 156.4 134 62.7
CARHR202820 Cardamine hirsuta HOM05D000141 ORTHO05D004993 3.4e-36 156.0 131 64.9
Thhalv10012459m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 4.4e-36 155.6 135 63.0
Hund14088 Selenicereus undatus HOM05D000141 ORTHO05D004993 5.7e-36 155.2 135 61.5
arahy.Tifrunner.gnm1.ann1.52WN7P Arachis hypogaea HOM05D000141 ORTHO05D004993 7.5e-36 154.8 128 61.7
arahy.Tifrunner.gnm1.ann1.5SKZ26 Arachis hypogaea HOM05D000141 ORTHO05D004993 7.5e-36 154.8 128 61.7
AT5G10470 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 9.8e-36 154.5 131 65.6
PGR031G3531 Punica granatum HOM05D000141 ORTHO05D004993 9.8e-36 154.5 129 66.7
Sp2g28540 Schrenkiella parvula HOM05D000141 ORTHO05D004993 9.8e-36 154.5 128 64.8
HanXRQChr13g0405071 Helianthus annuus HOM05D000141 ORTHO05D004993 2.2e-35 153.3 126 65.9
Aqoxy6G01438 Aquilegia oxysepala HOM05D000141 ORTHO05D004993 4.8e-35 152.1 134 60.4
BcaB01g05532 Brassica carinata HOM05D000141 ORTHO05D004993 4.8e-35 152.1 135 61.5
C03p05120 Brassica napus HOM05D000141 ORTHO05D004993 4.8e-35 152.1 135 61.5
AUR62017965 Chenopodium quinoa HOM05D000141 ORTHO05D004993 4.8e-35 152.1 137 59.9
Ca_22599_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004993 4.8e-35 152.1 477 28.9
Migut.K00793 Erythranthe guttata HOM05D000141 ORTHO05D004993 4.8e-35 152.1 131 62.6
PSO541G3987 Papaver somniferum HOM05D000141 ORTHO05D004993 4.8e-35 152.1 134 61.9
PSO675G5554 Papaver somniferum HOM05D000141 ORTHO05D004993 4.8e-35 152.1 134 61.9
AUR62003657 Chenopodium quinoa HOM05D000141 ORTHO05D004993 6.3e-35 151.8 138 59.4
DCAR_003449 Daucus carota HOM05D000141 ORTHO05D004993 6.3e-35 151.8 130 62.3
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 6.3e-35 151.8 131 64.1
AL8G43040 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 8.3e-35 151.4 131 64.1
BcaB01g06283 Brassica carinata HOM05D000141 ORTHO05D004993 8.3e-35 151.4 135 61.5
AT5G65460 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 1.1e-34 151.0 131 64.1
EL10Ac6g15211 Beta vulgaris HOM05D000141 ORTHO05D004993 1.1e-34 151.0 134 61.2
A03p04560 Brassica napus HOM05D000141 ORTHO05D004993 1.1e-34 151.0 135 60.7
BraA03t09798Z Brassica rapa HOM05D000141 ORTHO05D004993 1.1e-34 151.0 135 60.7
MD15G1313600 Malus domestica HOM05D000141 ORTHO05D004993 1.4e-34 150.6 131 60.3
Sp6g32970 Schrenkiella parvula HOM05D000141 ORTHO05D004993 3.1e-34 149.4 135 61.5
Solyc11g010560.3 Solanum lycopersicum HOM05D000141 ORTHO05D004993 4.1e-34 149.1 130 60.0
A06p32290 Brassica napus HOM05D000141 ORTHO05D004993 9.1e-34 147.9 132 62.1
BraA06t26155Z Brassica rapa HOM05D000141 ORTHO05D004993 9.1e-34 147.9 132 62.1
Cfa006890 Carpinus fangiana HOM05D000141 ORTHO05D004993 9.1e-34 147.9 103 73.8
Sopen11g005360 Solanum pennellii HOM05D000141 ORTHO05D004993 9.1e-34 147.9 130 60.0
CAN.G1344.1 Capsicum annuum HOM05D000141 ORTHO05D004993 1.6e-33 147.1 130 60.0
CDE10G0717 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 1.6e-33 147.1 134 59.0
MBI02_g32604_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004993 1.6e-33 147.1 130 60.0
SalBow5G1291 Salvia bowleyana HOM05D000141 ORTHO05D004993 1.6e-33 147.1 130 61.5
Aa31LG1G16550 Aethionema arabicum HOM05D000141 ORTHO05D004993 2.0e-33 146.7 131 60.3
Carub.0008s2631 Capsella rubella HOM05D000141 ORTHO05D004993 2.0e-33 146.7 128 60.2
unitig_748.g7037 Utricularia gibba HOM05D000141 ORTHO05D004993 2.0e-33 146.7 137 59.1
C03p60620 Brassica napus HOM05D000141 ORTHO05D004993 2.7e-33 146.4 132 61.4
BolC3t18317H Brassica oleracea HOM05D000141 ORTHO05D004993 2.7e-33 146.4 132 61.4
THA.LOC104819293 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 2.7e-33 146.4 145 53.8
Ah.03g140120 Amaranthus hybridus HOM05D000141 ORTHO05D004993 3.5e-33 146.0 138 58.0
DCAR_016619 Daucus carota HOM05D000141 ORTHO05D004993 3.5e-33 146.0 130 65.4
ATR0665G420 Amborella trichopoda HOM05D000141 ORTHO05D004993 5.9e-33 145.2 103 69.9
CDE10G0963 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 1.3e-32 144.1 134 58.2
Lsat_1_v5_gn_3_61481 Lactuca sativa HOM05D000141 ORTHO05D004993 1.3e-32 144.1 133 60.2
CARHR279440 Cardamine hirsuta HOM05D000141 ORTHO05D004993 3.8e-32 142.5 131 61.1
HPP92_005965 Vanilla planifolia HOM05D000141 ORTHO05D004993 2.5e-31 139.8 133 57.9
Aa31LG3G16690 Aethionema arabicum HOM05D000141 ORTHO05D004993 4.2e-31 139.0 134 56.7
Zm00001eb372980 Zea mays HOM05D000141 ORTHO05D004993 7.2e-31 138.3 132 56.1
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 2.1e-30 136.7 134 59.0
Os06g0217600 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004993 6.1e-30 135.2 103 67.0
SEGI_00023 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 2.0e-25 120.2 105 60.0
Pp3c4_24010 Physcomitrium patens HOM05D000141 ORTHO05D004993 1.1e-23 114.4 130 47.7
Eucgr.I00476 Eucalyptus grandis HOM05D000141 ORTHO05D004993 1.9e-23 113.6 129 55.8
QL10p045557 Quercus lobata HOM05D000141 ORTHO05D004993 1.9e-23 113.6 95 62.1
Lsat_1_v5_gn_1_89581 Lactuca sativa HOM05D000041 ORTHO05D000452 5.6e-23 112.1 166 41.6
Mapoly0022s0156 Marchantia polymorpha HOM05D000141 ORTHO05D004993 7.3e-23 111.7 103 57.3
QL10p044591 Quercus lobata HOM05D006593 ORTHO05D004993 9.5e-23 111.3 95 61.1
Pp3c3_10920 Physcomitrium patens HOM05D000141 ORTHO05D004993 8.9e-21 104.8 104 54.8
Pp3c3_10921 Physcomitrium patens HOM05D000141 ORTHO05D004993 8.9e-21 104.8 104 54.8
SMO169G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 3.4e-20 102.8 130 47.7
VMungo1215G2324 Vigna mungo HOM05D000141 ORTHO05D004993 3.4e-20 102.8 114 50.0
CSS0023880 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 3.7e-19 99.4 99 56.6
SMO337G0058 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 4.9e-19 99.0 106 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4409 Anthoceros agrestis HOM05D000141 ORTHO05D004993 6.4e-19 98.6 102 53.9
MD15G1313400 Malus domestica HOM05D000141 ORTHO05D004993 1.1e-18 97.8 114 47.4
Gohir.D11G217000 Gossypium hirsutum HOM05D000141 ORTHO05D004993 3.2e-18 96.3 98 52.0
FAN23G0308 Fragaria x ananassa HOM05D000404 ORTHO05D004993 1.6e-17 94.0 114 46.5
FAN23G1526 Fragaria x ananassa HOM05D000141 ORTHO05D004993 1.6e-17 94.0 114 46.5
Haze_03862 Corylus avellana HOM05D000141 ORTHO05D004993 2.7e-17 93.2 98 51.0
Lj2C535G3 Lonicera japonica HOM05D000141 ORTHO05D004993 5.9e-17 92.0 106 50.0
GSVIVG01005935001 Vitis vinifera HOM05D000141 ORTHO05D004993 5.9e-17 92.0 106 49.1
Nitab4.5_0004153g0030 Nicotiana tabacum HOM05D000141 ORTHO05D004993 3.0e-16 89.7 106 48.1
Nitab4.5_0001468g0110 Nicotiana tabacum HOM05D000141 ORTHO05D004993 5.0e-16 89.0 106 47.2
TAR628G0162 Trochodendron aralioides HOM05D000141 ORTHO05D004993 6.6e-16 88.6 106 50.0
Dinv36920 Davidia involucrata HOM05D000141 ORTHO05D004993 1.1e-15 87.8 106 47.2
Thhalv10003525m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 2.1e-14 83.6 113 44.2
unitig_0.g1718 Utricularia gibba HOM05D000141 ORTHO05D004993 1.4e-13 80.9 99 49.5
Psat0s1531g0080 Pisum sativum HOM05D000141 ORTHO05D017607 9.8e-12 74.7 73 52.1
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 2.7e-09 66.6 52 65.4
Psat0ss29278g0040 Pisum sativum HOM05D000141 ORTHO05D004993 1.7e-08 63.9 100 40.0
Psat0ss29278g0080 Pisum sativum HOM05D000141 ORTHO05D004993 1.7e-08 63.9 100 40.0
TPR.G36254 Trifolium pratense HOM05D000141 ORTHO05D004993 1.7e-08 63.9 62 56.5
CAN.G1724.1 Capsicum annuum HOM05D000141 ORTHO05D004993 2.3e-08 63.5 98 39.8
Lj2A535G40 Lonicera japonica HOM05D000141 ORTHO05D004993 3.9e-08 62.8 38 81.6
Psat6g213040 Pisum sativum HOM05D000141 ORTHO05D004993 4.7e-06 55.8 54 55.6


User provided reference genes

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