Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11894 Sapria himalayana HOM05D000533 ORTHO05D001069 2.2e-108 395.6 194 100.0
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 6.4e-31 138.3 121 64.5
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 2.3e-28 129.8 147 53.1
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 3.0e-28 129.4 148 52.7
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 6.6e-28 128.3 122 60.7
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 4.7e-26 122.1 148 50.7
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.7e-26 122.1 155 47.1
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.7e-26 122.1 155 47.1
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 8.1e-26 121.3 137 53.3
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 3.1e-25 119.4 148 50.0
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 3.1e-25 119.4 148 50.0
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 3.1e-25 119.4 148 50.0
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 3.1e-25 119.4 148 50.0
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 4.0e-25 119.0 165 46.7
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 8.9e-25 117.9 165 46.1
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 3.4e-24 115.9 169 45.0
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 3.4e-24 115.9 169 45.0
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.3e-23 114.0 114 54.4
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 2.9e-23 112.8 173 43.9
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.4e-22 110.5 167 43.7
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.9e-22 110.2 148 45.3
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 7.1e-22 108.2 149 46.3
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 1.8e-17 93.6 72 68.1
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 3.1e-17 92.8 148 44.6
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 4.0e-17 92.4 135 42.2
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 5.2e-17 92.0 83 61.4
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 5.2e-17 92.0 72 66.7
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 5.2e-17 92.0 71 66.2
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 1.2e-16 90.9 72 65.3
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 1.2e-16 90.9 72 65.3
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-16 90.9 69 68.1
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.5e-16 90.5 64 71.9
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 2.0e-16 90.1 73 65.8
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 2.0e-16 90.1 73 65.8
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 2.0e-16 90.1 73 65.8
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 2.0e-16 90.1 73 65.8
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 2.0e-16 90.1 72 65.3
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-16 90.1 63 73.0
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 2.0e-16 90.1 72 65.3
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 2.6e-16 89.7 72 65.3
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.6e-16 89.7 72 66.7
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 3.4e-16 89.4 72 65.3
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 3.4e-16 89.4 72 65.3
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-16 89.4 72 63.9
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.4e-16 89.0 71 66.2
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.4e-16 89.0 72 65.3
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.4e-16 89.0 64 71.9
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.4e-16 89.0 64 71.9
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 5.8e-16 88.6 148 39.9
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 5.8e-16 88.6 72 62.5
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 9.9e-16 87.8 72 63.9
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.9e-16 87.8 71 63.4
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.3e-15 87.4 72 63.9
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 1.3e-15 87.4 69 68.1
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 1.7e-15 87.0 72 63.9
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.7e-15 87.0 72 63.9
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.7e-15 87.0 71 64.8
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 1.7e-15 87.0 72 63.9
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 2.2e-15 86.7 72 63.9
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 2.2e-15 86.7 72 63.9
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 2.2e-15 86.7 71 64.8
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 2.2e-15 86.7 72 63.9
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.2e-15 86.7 72 63.9
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 2.2e-15 86.7 72 63.9
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 3.8e-15 85.9 68 66.2
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 3.8e-15 85.9 153 38.6
SHI25676 Sapria himalayana HOM05D000533 ORTHO05D001069 6.4e-15 85.1 56 71.4
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 8.4e-15 84.7 72 62.5
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.9e-14 83.6 72 61.1
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.2e-14 82.8 68 64.7
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.2e-14 82.8 72 62.5
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.2e-14 82.4 60 70.0
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.4e-14 82.0 68 63.2
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-13 80.9 61 67.2
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.6e-13 80.5 64 64.1
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 1.6e-13 80.5 54 74.1
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.1e-13 80.1 68 61.8
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.7e-13 79.7 64 62.5
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 2.7e-13 79.7 58 70.7
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 3.5e-13 79.3 153 35.9
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 4.6e-13 79.0 61 65.6
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 6.0e-13 78.6 67 61.2
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 6.0e-13 78.6 67 61.2
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.0e-12 77.8 54 75.9
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 1.3e-12 77.4 63 65.1
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.3e-12 77.4 148 33.1
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.3e-12 77.4 65 63.1
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 2.3e-12 76.6 61 65.6
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 2.3e-12 76.6 61 65.6
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 3.0e-12 76.3 148 35.8
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 5.1e-12 75.5 62 66.1
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 1.1e-11 74.3 61 63.9
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 1.1e-11 74.3 61 63.9
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 1.1e-11 74.3 61 63.9
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 1.5e-11 73.9 63 63.5
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.3e-10 70.9 58 63.8
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 2.1e-10 70.1 61 63.9
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 2.2e-07 60.1 49 55.1
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 3.8e-07 59.3 47 61.7
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 4.9e-07 58.9 47 63.8
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 8.4e-07 58.2 47 63.8
PGSC0003DMG400029134 Solanum tuberosum HOM05D000533 ORTHO05D001069 1.1e-06 57.8 47 61.7
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 1.4e-06 57.4 47 61.7
Peaxi162Scf00197g00027 Petunia axillaris HOM05D000533 ORTHO05D001069 1.9e-06 57.0 47 61.7
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.9e-06 57.0 47 61.7
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 1.9e-06 57.0 47 61.7
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 1.9e-06 57.0 47 63.8
ClCG08G009690 Citrullus lanatus HOM05D000533 ORTHO05D001069 2.4e-06 56.6 37 75.7
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.4e-06 56.6 47 59.6
RhsimMtG0002200 Rhododendron simsii HOM05D000533 ORTHO05D001069 3.2e-06 56.2 46 65.2
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.2e-06 55.8 45 64.4
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
BraSC159t45715Z Brassica rapa HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
Cpa.g.sc263.14 Carica papaya HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
Nitab4.5_0000172g0870 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.2e-06 55.8 47 61.7
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 4.2e-06 55.8 46 65.2
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 5.4e-06 55.5 47 61.7
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7
CsaV3_6G025230 Cucumis sativus L. HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7
CsaV3_6G025300 Cucumis sativus L. HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7
CsaV3_UNG208530 Cucumis sativus L. HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7
Sed0020382 Sechium edule HOM05D000533 ORTHO05D001069 9.3e-06 54.7 47 61.7


User provided reference genes

Program Settings