Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 6.9e-179 630.6 328 100.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 4.7e-34 149.4 134 59.0
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.4e-33 147.9 134 59.0
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.4e-33 147.9 134 59.7
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 8.8e-33 145.2 114 64.9
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 8.8e-33 145.2 105 69.5
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.2e-32 144.8 122 63.9
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.2e-32 144.8 152 55.3
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.5e-32 144.4 132 59.1
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 2.0e-32 144.1 114 64.9
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.0e-32 144.1 134 58.2
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 2.6e-32 143.7 134 59.7
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.6e-32 143.7 107 68.2
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 2.6e-32 143.7 124 62.1
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 3.4e-32 143.3 109 67.9
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 3.4e-32 143.3 107 68.2
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 3.4e-32 143.3 134 59.0
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 3.4e-32 143.3 105 68.6
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 4.4e-32 142.9 134 56.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 4.4e-32 142.9 109 66.1
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 4.4e-32 142.9 113 66.4
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 4.4e-32 142.9 109 67.0
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 4.4e-32 142.9 110 65.5
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 5.7e-32 142.5 148 55.4
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 5.7e-32 142.5 134 57.5
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 7.5e-32 142.1 107 67.3
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 7.5e-32 142.1 105 67.6
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 7.5e-32 142.1 105 67.6
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 9.8e-32 141.7 107 68.2
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.3e-31 141.4 104 69.2
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.3e-31 141.4 105 66.7
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.3e-31 141.4 111 64.9
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.3e-31 141.4 108 64.8
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.3e-31 141.4 113 65.5
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 1.7e-31 141.0 134 55.2
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 1.7e-31 141.0 105 68.6
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 2.2e-31 140.6 134 56.0
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.2e-31 140.6 105 65.7
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 2.8e-31 140.2 109 64.2
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.8e-31 140.2 104 68.3
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.8e-31 140.2 104 68.3
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 2.8e-31 140.2 105 66.7
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.7e-31 139.8 109 64.2
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 3.7e-31 139.8 104 68.3
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-31 139.8 104 68.3
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-31 139.8 104 68.3
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-31 139.8 104 68.3
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.7e-31 139.8 109 65.1
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 4.8e-31 139.4 120 63.3
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 4.8e-31 139.4 134 58.2
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 4.8e-31 139.4 109 67.0
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.8e-31 139.4 120 62.5
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 4.8e-31 139.4 122 62.3
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.3e-31 139.0 105 64.8
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 6.3e-31 139.0 104 67.3
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.3e-31 138.7 109 65.1
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 8.3e-31 138.7 121 57.9
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 8.3e-31 138.7 105 64.8
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 8.3e-31 138.7 132 56.8
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.1e-30 138.3 105 63.8
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.4e-30 137.9 110 63.6
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.4e-30 137.9 110 65.5
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.4e-30 137.9 109 61.5
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.8e-30 137.5 105 65.7
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.8e-30 137.5 134 56.7
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.4e-30 137.1 120 61.7
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 3.1e-30 136.7 105 66.7
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 3.1e-30 136.7 133 55.6
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 3.1e-30 136.7 105 64.8
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 4.1e-30 136.3 105 63.8
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 4.1e-30 136.3 107 62.6
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.4e-30 136.0 122 61.5
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 7.0e-30 135.6 107 63.6
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 7.0e-30 135.6 140 52.1
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 9.1e-30 135.2 116 59.5
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 9.1e-30 135.2 105 65.7
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 9.1e-30 135.2 139 54.0
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.2e-29 134.8 113 62.8
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.2e-29 134.8 113 62.8
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.2e-29 134.8 113 62.8
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.2e-29 134.8 113 62.8
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.2e-29 134.8 107 66.4
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 1.2e-29 134.8 105 64.8
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 1.6e-29 134.4 109 62.4
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.6e-29 134.4 107 62.6
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 2.0e-29 134.0 134 52.2
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.0e-29 134.0 107 63.6
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.0e-29 134.0 105 62.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 2.0e-29 134.0 108 62.0
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.7e-29 133.7 113 61.1
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.7e-29 133.7 104 66.3
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-29 133.7 104 66.3
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.5e-29 133.3 123 58.5
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.5e-29 133.3 105 65.7
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.5e-29 133.3 105 65.7
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 4.5e-29 132.9 109 62.4
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 4.5e-29 132.9 105 63.8
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 7.7e-29 132.1 109 66.1
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.0e-28 131.7 103 64.1
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.3e-28 131.3 107 60.7
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.3e-28 131.3 105 64.8
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.7e-28 131.0 109 62.4
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.2e-28 130.6 107 59.8
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 3.8e-28 129.8 109 61.5
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 3.8e-28 129.8 90 68.9
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 5.0e-28 129.4 90 67.8
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.1e-27 128.3 90 68.9
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.1e-27 128.3 109 59.6
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.5e-27 127.1 113 59.3
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 2.5e-27 127.1 109 62.4
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 5.5e-27 125.9 90 66.7
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 5.5e-27 125.9 104 61.5
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 9.5e-27 125.2 105 63.8
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 6.1e-26 122.5 107 58.9
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.8e-25 120.9 105 61.0
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 4.0e-25 119.8 121 53.7
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.2e-25 119.4 114 56.1
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 8.8e-25 118.6 100 60.0
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 2.0e-24 117.5 121 53.7
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 2.6e-24 117.1 109 57.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.9e-23 112.8 81 67.9
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 1.8e-22 110.9 110 54.5
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.4e-22 110.5 103 57.3
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 9.2e-22 108.6 93 60.2
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 1.7e-20 104.4 104 51.9
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 3.6e-18 96.7 120 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 8.0e-18 95.5 91 52.7
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.4e-17 94.7 110 46.4
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.8e-17 94.4 111 50.5
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.0e-17 93.2 101 57.4
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 7.5e-16 89.0 121 43.0
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 7.5e-16 89.0 131 42.0
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.3e-15 85.5 87 49.4
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 1.0e-12 78.6 96 43.8
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 8.6e-12 75.5 84 48.8
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.9e-09 65.5 62 58.1
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.3e-07 61.6 123 35.0


User provided reference genes

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