Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11375 Sapria himalayana HOM05D000730 ORTHO05D000578 3.4e-63 245.0 135 100.0
HanXRQChr04g0119551 Helianthus annuus HOM05D000730 ORTHO05D000578 8.2e-09 64.3 114 35.1
FvH4_7g03630 Fragaria vesca HOM05D000730 ORTHO05D000578 5.3e-08 61.6 89 40.4
FAN06G3967 Fragaria x ananassa HOM05D000730 ORTHO05D000578 5.3e-08 61.6 89 40.4
FAN10G2667 Fragaria x ananassa HOM05D000730 ORTHO05D000578 9.0e-08 60.8 89 39.3
RcHm_v2.0_Chr1g0326411 Rosa chinensis HOM05D000730 ORTHO05D000578 1.2e-07 60.5 89 40.4
ClCG05G026970 Citrullus lanatus HOM05D000730 ORTHO05D000578 2.0e-07 59.7 89 40.4
Potri.001G030100 Populus trichocarpa HOM05D000730 ORTHO05D000578 2.0e-07 59.7 87 40.2
Ciclev10001785m.g Citrus clementina HOM05D000730 ORTHO05D000578 2.6e-07 59.3 110 40.0
COL.COLO4_20721 Corchorus olitorius HOM05D000730 ORTHO05D000578 2.6e-07 59.3 89 40.4
GSVIVG01036645001 Vitis vinifera HOM05D000730 ORTHO05D000578 2.6e-07 59.3 89 42.7
ECA236G3986 Erigeron canadensis HOM05D000730 ORTHO05D000578 3.4e-07 58.9 113 34.5
Prupe.2G042100 Prunus persica HOM05D000730 ORTHO05D000578 3.4e-07 58.9 89 39.3
CANSAT56G2780 Cannabis sativa HOM05D000730 ORTHO05D000578 4.5e-07 58.5 89 38.2
Migut.B01242 Erythranthe guttata HOM05D000730 ORTHO05D000578 4.5e-07 58.5 87 40.2
Lj3g0012169 Lotus japonicus HOM05D000730 ORTHO05D000578 5.8e-07 58.2 126 34.1
MD02G1278500 Malus domestica HOM05D000730 ORTHO05D000578 5.8e-07 58.2 129 31.0
Nn7g36786 Nelumbo nucifera HOM05D000730 ORTHO05D000578 5.8e-07 58.2 87 41.4
CsaV3_5G036910 Cucumis sativus L. HOM05D000730 ORTHO05D000578 7.6e-07 57.8 114 35.1
Duzib114G0880 Durio zibethinus HOM05D000730 ORTHO05D000578 1.0e-06 57.4 89 38.2
MD07G1046600 Malus domestica HOM05D000730 ORTHO05D000578 1.0e-06 57.4 89 39.3
Sabra01G0021600 Salix brachista HOM05D000730 ORTHO05D000578 1.0e-06 57.4 88 40.9
CiPaw.13G015400 Carya illinoinensis HOM05D000730 ORTHO05D000578 1.7e-06 56.6 89 37.1
MELO3C012490.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.7e-06 56.6 89 38.2
Manes.04G156900 Manihot esculenta HOM05D000730 ORTHO05D000578 1.7e-06 56.6 89 37.1
Oeu064135.2 Olea europaea HOM05D000730 ORTHO05D000578 1.7e-06 56.6 124 34.7
Gohir.D05G284200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 2.2e-06 56.2 89 37.1
Gorai.009G298800 Gossypium raimondii HOM05D000730 ORTHO05D000578 2.2e-06 56.2 89 37.1
SalBow5G1057 Salvia bowleyana HOM05D000730 ORTHO05D000578 2.2e-06 56.2 87 37.9
VMungo1127G0979 Vigna mungo HOM05D000730 ORTHO05D000578 2.2e-06 56.2 129 31.0
Duzib128G1742 Durio zibethinus HOM05D000730 ORTHO05D000578 2.9e-06 55.8 89 38.2
Thecc.10G145500 Theobroma cacao HOM05D000730 ORTHO05D000578 2.9e-06 55.8 89 38.2
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 2.9e-06 55.8 86 40.7
DCAR_006604 Daucus carota HOM05D000730 ORTHO05D000578 3.8e-06 55.5 87 40.2
Gohir.A05G283200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 3.8e-06 55.5 89 37.1
Medtr8g040190 Medicago truncatula HOM05D000730 ORTHO05D000578 3.8e-06 55.5 126 34.1
Phvul.011G201400 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 3.8e-06 55.5 129 30.2
Zm00001eb285140 Zea mays HOM05D000730 ORTHO05D000578 3.8e-06 55.5 87 36.8
Lsat_1_v5_gn_4_95640 Lactuca sativa HOM05D000730 ORTHO05D000578 4.9e-06 55.1 87 39.1
AL6G17130 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 6.5e-06 54.7 89 38.2
Eucgr.J00067 Eucalyptus grandis HOM05D000730 ORTHO05D000578 6.5e-06 54.7 111 35.1
Aqoxy2G00416 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 8.4e-06 54.3 89 40.4
Cc00_g07550 Coffea canephora HOM05D000730 ORTHO05D000578 8.4e-06 54.3 110 32.7


User provided reference genes

Program Settings