Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11370 Sapria himalayana HOM05D000730 ORTHO05D000578 1.4e-204 716.1 357 100.0
Gohir.A05G283200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 3.9e-34 149.8 188 51.6
Gorai.009G298800 Gossypium raimondii HOM05D000730 ORTHO05D000578 3.9e-34 149.8 188 51.6
COL.COLO4_20721 Corchorus olitorius HOM05D000730 ORTHO05D000578 8.7e-34 148.7 188 52.1
Gohir.D05G284200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 2.5e-33 147.1 188 51.1
Thecc.10G145500 Theobroma cacao HOM05D000730 ORTHO05D000578 1.3e-32 144.8 186 50.5
Cpa.g.sc169.47 Carica papaya HOM05D000730 ORTHO05D000578 1.6e-32 144.4 187 49.7
Duzib128G1742 Durio zibethinus HOM05D000730 ORTHO05D000578 4.8e-32 142.9 190 50.5
VMungo1127G0979 Vigna mungo HOM05D000730 ORTHO05D000578 5.3e-31 139.4 190 51.6
TWI60G0879 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 6.9e-31 139.0 201 45.8
Glyma.15G230600 Glycine max HOM05D000730 ORTHO05D000578 2.6e-30 137.1 191 48.7
Psat4g145160 Pisum sativum HOM05D000730 ORTHO05D000578 4.5e-30 136.3 191 45.5
Dinv44710 Davidia involucrata HOM05D000730 ORTHO05D000578 2.2e-29 134.0 183 48.1
Duzib114G0880 Durio zibethinus HOM05D000730 ORTHO05D000578 1.1e-28 131.7 190 47.9
Lalb_Chr19g0132961 Lupinus albus HOM05D000730 ORTHO05D000578 1.1e-28 131.7 191 45.0
Medtr8g040190 Medicago truncatula HOM05D000730 ORTHO05D000578 1.1e-28 131.7 191 46.6
DCAR_006604 Daucus carota HOM05D000730 ORTHO05D000578 4.2e-28 129.8 195 44.1
Glyma.13G192900 Glycine max HOM05D000730 ORTHO05D000578 4.2e-28 129.8 190 47.4
CARHR206170 Cardamine hirsuta HOM05D000730 ORTHO05D000578 5.5e-28 129.4 188 45.2
FvH4_7g03630 Fragaria vesca HOM05D000730 ORTHO05D000578 5.5e-28 129.4 193 48.7
FAN06G3967 Fragaria x ananassa HOM05D000730 ORTHO05D000578 5.5e-28 129.4 193 48.7
Lj3g0012169 Lotus japonicus HOM05D000730 ORTHO05D000578 5.5e-28 129.4 191 45.5
PGR044G0565 Punica granatum HOM05D000730 ORTHO05D000578 5.5e-28 129.4 197 43.1
Carub.0006s0590 Capsella rubella HOM05D000730 ORTHO05D000578 1.6e-27 127.9 189 47.1
FAN03G3014 Fragaria x ananassa HOM05D000730 ORTHO05D000578 3.5e-27 126.7 163 51.5
FAN10G2667 Fragaria x ananassa HOM05D000730 ORTHO05D000578 3.5e-27 126.7 190 46.8
Phvul.011G201400 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 3.5e-27 126.7 190 47.4
TPR.G8523 Trifolium pratense HOM05D000730 ORTHO05D000578 4.6e-27 126.3 191 45.5
Lalb_Chr03g0032161 Lupinus albus HOM05D000730 ORTHO05D000578 6.0e-27 125.9 190 43.2
Sc10g0004540 Simmondsia chinensis HOM05D000730 ORTHO05D000578 1.0e-26 125.2 208 43.8
Atru.chr12.1287 Acer truncatum HOM05D000730 ORTHO05D000578 2.3e-26 124.0 201 44.8
MD02G1278500 Malus domestica HOM05D000730 ORTHO05D000578 2.3e-26 124.0 195 45.6
RcHm_v2.0_Chr1g0326411 Rosa chinensis HOM05D000730 ORTHO05D000578 2.3e-26 124.0 192 46.4
SGA_v2.0_scaffold124G33604 Striga asiatica HOM05D000730 ORTHO05D000578 3.0e-26 123.6 194 45.9
CSS0025631 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 5.1e-26 122.9 194 44.8
Potri.001G030100 Populus trichocarpa HOM05D000730 ORTHO05D000578 5.1e-26 122.9 194 44.8
AUR62032627 Chenopodium quinoa HOM05D000730 ORTHO05D000578 6.7e-26 122.5 211 42.2
Sp6g35900 Schrenkiella parvula HOM05D000730 ORTHO05D000578 6.7e-26 122.5 188 43.6
AUR62031742 Chenopodium quinoa HOM05D000730 ORTHO05D000578 1.1e-25 121.7 211 41.2
arahy.Tifrunner.gnm1.ann1.H567TY Arachis hypogaea HOM05D000730 ORTHO05D000578 2.5e-25 120.6 191 43.5
BcaC06g32528 Brassica carinata HOM05D000730 ORTHO05D000578 2.5e-25 120.6 188 44.7
Prupe.2G042100 Prunus persica HOM05D000730 ORTHO05D000578 2.5e-25 120.6 194 44.3
Eucgr.J00067 Eucalyptus grandis HOM05D000730 ORTHO05D000578 3.3e-25 120.2 198 42.9
arahy.Tifrunner.gnm1.ann1.8I68MQ Arachis hypogaea HOM05D000730 ORTHO05D000578 4.3e-25 119.8 191 43.5
Manes.04G156900 Manihot esculenta HOM05D000730 ORTHO05D000578 4.3e-25 119.8 191 44.0
Nn7g36786 Nelumbo nucifera HOM05D000730 ORTHO05D000578 1.3e-24 118.2 183 42.6
Sed0013589 Sechium edule HOM05D000730 ORTHO05D000578 1.6e-24 117.9 193 40.9
AL6G17130 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 2.1e-24 117.5 188 43.6
Lsat_1_v5_gn_7_31081 Lactuca sativa HOM05D000730 ORTHO05D000578 2.1e-24 117.5 189 42.3
PSO384G0089 Papaver somniferum HOM05D000730 ORTHO05D000578 2.8e-24 117.1 180 45.6
Lj9A659G48 Lonicera japonica HOM05D000730 ORTHO05D000578 3.7e-24 116.7 195 44.6
Aqoxy2G00416 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 6.2e-24 115.9 185 43.2
MD07G1046600 Malus domestica HOM05D000730 ORTHO05D000578 6.2e-24 115.9 194 43.3
PSO339G1614 Papaver somniferum HOM05D000730 ORTHO05D000578 8.2e-24 115.5 180 45.0
AT5G06970 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 1.8e-23 114.4 188 44.1
Lalb_Chr01g0007391 Lupinus albus HOM05D000730 ORTHO05D000578 2.4e-23 114.0 184 44.0
EL10Ac2g02767 Beta vulgaris HOM05D000730 ORTHO05D000578 4.0e-23 113.2 205 41.0
Migut.B01242 Erythranthe guttata HOM05D000730 ORTHO05D000578 5.3e-23 112.8 193 42.5
HanXRQChr04g0119551 Helianthus annuus HOM05D000730 ORTHO05D000578 6.9e-23 112.5 193 41.5
CAN.G134.13 Capsicum annuum HOM05D000730 ORTHO05D000578 1.2e-22 111.7 192 42.7
THA.LOC104799323 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 2.0e-22 110.9 188 43.1
MBI19_g36134_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 2.6e-22 110.5 185 41.6
Hund15746 Selenicereus undatus HOM05D000730 ORTHO05D000578 1.0e-21 108.6 214 37.4
CiPaw.13G015400 Carya illinoinensis HOM05D000730 ORTHO05D000578 3.8e-21 106.7 201 41.3
Solyc01g096540.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 4.9e-21 106.3 192 40.6
CDE09G0864 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 6.5e-21 105.9 187 40.6
CANSAT56G2780 Cannabis sativa HOM05D000730 ORTHO05D000578 8.4e-21 105.5 163 46.6
Zm00001eb285140 Zea mays HOM05D000730 ORTHO05D000578 1.1e-20 105.1 192 39.6
Sopen01g040270 Solanum pennellii HOM05D000730 ORTHO05D000578 1.4e-20 104.8 153 44.4
Rhsim07G0068600 Rhododendron simsii HOM05D000730 ORTHO05D000578 1.9e-20 104.4 205 40.0
ECA236G3986 Erigeron canadensis HOM05D000730 ORTHO05D000578 5.5e-20 102.8 190 37.9
Peaxi162Scf00082g00018 Petunia axillaris HOM05D000730 ORTHO05D000578 5.5e-20 102.8 139 47.5
Actinidia06224 Actinidia chinensis HOM05D000730 ORTHO05D000578 1.2e-19 101.7 189 42.3
Cc00_g07550 Coffea canephora HOM05D000730 ORTHO05D000578 1.2e-19 101.7 197 41.1
Nitab4.5_0002838g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 1.2e-19 101.7 211 40.8
Nitab4.5_0005420g0020 Nicotiana tabacum HOM05D000730 ORTHO05D000578 1.2e-19 101.7 211 40.8
Ca_23976_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 3.5e-19 100.1 163 42.3
Thhalv10012512m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 7.9e-19 99.0 188 38.8
GSVIVG01036645001 Vitis vinifera HOM05D000730 ORTHO05D000578 1.0e-18 98.6 183 40.4
Haze_03002 Corylus avellana HOM05D000730 ORTHO05D000578 2.5e-17 94.0 218 35.8
CsaV3_5G036910 Cucumis sativus L. HOM05D000730 ORTHO05D000578 4.3e-17 93.2 195 38.5
SMO116G0331 Selaginella moellendorffii HOM05D000730 ORTHO05D000578 4.3e-17 93.2 182 38.5
A10p28770 Brassica napus HOM05D000730 ORTHO05D000578 1.3e-16 91.7 191 38.2
BcaNung04208 Brassica carinata HOM05D000730 ORTHO05D000578 1.6e-16 91.3 191 38.2
C09p69110 Brassica napus HOM05D000730 ORTHO05D000578 1.6e-16 91.3 191 38.2
BolC9t59655H Brassica oleracea HOM05D000730 ORTHO05D000578 1.6e-16 91.3 191 38.2
MELO3C012490.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.6e-16 91.3 195 37.9
Sabra01G0021600 Salix brachista HOM05D000730 ORTHO05D000578 1.6e-16 91.3 181 40.3
BraA10t44924Z Brassica rapa HOM05D000730 ORTHO05D000578 2.2e-16 90.9 191 37.7
Ciclev10003518m.g Citrus clementina HOM05D000730 ORTHO05D000578 2.2e-16 90.9 187 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4217 Anthoceros agrestis HOM05D000730 ORTHO05D000578 3.1e-15 87.0 185 38.9
Pp3c7_24310 Physcomitrium patens HOM05D000730 ORTHO05D000578 2.2e-13 80.9 184 35.9
Mapoly0125s0045 Marchantia polymorpha HOM05D000730 ORTHO05D000578 2.9e-13 80.5 183 34.4
SalBow5G1057 Salvia bowleyana HOM05D000730 ORTHO05D000578 5.0e-13 79.7 47 87.2
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 6.5e-13 79.3 74 63.5
ClCG05G026970 Citrullus lanatus HOM05D000730 ORTHO05D000578 5.5e-12 76.3 140 40.0
vmacro07437 Vaccinium macrocarpon HOM05D000730 ORTHO05D000578 5.5e-12 76.3 165 38.2
ATR1096G139 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.3e-10 71.6 166 34.3
ATR0757G158 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.9e-09 67.8 104 39.4
SHI17219 Sapria himalayana HOM05D000002 ORTHO05D016858 1.7e-08 64.7 29 93.1
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-08 62.8 44 63.6
QL12p017589 Quercus lobata HOM05D000730 ORTHO05D000578 2.4e-07 60.8 109 38.5
Lsat_1_v5_gn_6_42840 Lactuca sativa HOM05D000730 ORTHO05D000578 1.2e-06 58.5 112 37.5
Lsat_1_v5_gn_3_8441 Lactuca sativa HOM05D000730 ORTHO05D000578 2.0e-06 57.8 126 36.5
MBI12_g43910_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 3.4e-06 57.0 179 33.5
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 5.9e-06 56.2 32 75.0


User provided reference genes

Program Settings