Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11166 Sapria himalayana HOM05D004845 ORTHO05D005957 1.3e-128 463.0 217 100.0
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 3.3e-12 76.3 43 81.4
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.3e-12 76.3 43 83.7
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 1.1e-10 71.2 47 72.3
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.8e-10 70.5 48 75.0
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.8e-10 70.5 47 72.3
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 1.8e-10 70.5 47 72.3
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 2.4e-10 70.1 43 76.7
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 2.4e-10 70.1 48 72.9
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 4.1e-10 69.3 47 68.1
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 4.1e-10 69.3 44 75.0
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.2e-09 67.8 43 72.1
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.2e-09 67.8 43 72.1
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 1.5e-09 67.4 47 68.1
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 2.0e-09 67.0 41 75.6
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 2.6e-09 66.6 43 69.8
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 3.4e-09 66.2 43 72.1
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 5.9e-09 65.5 48 68.8
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 7.7e-09 65.1 44 75.0
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.0e-08 64.7 47 63.8
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 1.0e-08 64.7 43 67.4
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.0e-08 64.7 47 66.0
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.0e-08 64.7 43 65.1
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 1.3e-08 64.3 43 69.8
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.2e-08 63.5 55 61.8
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 5.0e-08 62.4 41 70.7
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 1.1e-07 61.2 42 66.7
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 1.1e-07 61.2 45 68.9
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 1.4e-07 60.8 45 68.9
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 1.4e-07 60.8 41 65.9
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.9e-07 60.5 44 65.9
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 2.5e-07 60.1 43 67.4
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.5e-07 60.1 47 61.7
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 2.5e-07 60.1 48 64.6
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 4.2e-07 59.3 47 63.8
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 4.2e-07 59.3 47 63.8
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 7.2e-07 58.5 47 61.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 7.2e-07 58.5 47 61.7
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 2.7e-06 56.6 47 59.6
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.7e-06 55.8 47 61.7
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 6.1e-06 55.5 44 63.6
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 7.9e-06 55.1 43 65.1
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 7.9e-06 55.1 42 61.9
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 7.9e-06 55.1 40 65.0
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 7.9e-06 55.1 47 61.7


User provided reference genes

Program Settings