Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11092 Sapria himalayana HOM05D002451 ORTHO05D005601 2.0e-98 362.5 183 100.0
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 4.6e-31 138.7 127 57.5
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 7.4e-29 131.3 127 52.8
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 2.8e-28 129.4 127 52.0
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 6.9e-27 124.8 150 43.3
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 2.9e-25 119.4 127 52.0
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.1e-24 117.5 134 48.5
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.4e-24 117.1 127 46.5
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 3.2e-24 115.9 135 48.1
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 3.5e-23 112.5 137 45.3
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 6.0e-23 111.7 127 49.6
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.0e-22 110.9 129 47.3
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.3e-22 110.5 145 40.7
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.3e-22 110.5 127 49.6
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 2.3e-22 109.8 136 44.9
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 3.0e-22 109.4 127 48.8
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 8.7e-22 107.8 127 46.5
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 1.1e-21 107.5 123 48.8
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 2.5e-21 106.3 126 46.8
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 4.3e-21 105.5 126 48.4
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 7.4e-21 104.8 127 46.5
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.4e-21 104.8 125 44.0
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 9.6e-21 104.4 127 44.9
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 1.3e-20 104.0 127 42.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.3e-20 104.0 127 43.3
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 1.3e-20 104.0 143 42.0
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.3e-20 104.0 125 46.4
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 1.6e-20 103.6 128 45.3
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 1.6e-20 103.6 127 45.7
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.6e-20 103.6 127 42.5
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 2.1e-20 103.2 127 47.2
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 2.8e-20 102.8 126 43.7
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 2.8e-20 102.8 126 43.7
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 4.8e-20 102.1 127 46.5
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 2.4e-19 99.8 127 41.7
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 2.4e-19 99.8 128 41.4
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 3.1e-19 99.4 127 40.9
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 5.3e-19 98.6 160 37.5
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 6.9e-19 98.2 127 44.1
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 9.0e-19 97.8 144 41.0
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 2.0e-18 96.7 127 41.7
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 2.6e-18 96.3 127 44.9
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 4.5e-18 95.5 142 38.7
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 4.5e-18 95.5 169 36.7
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 5.8e-18 95.1 127 44.1
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 1.3e-17 94.0 147 37.4
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 2.2e-17 93.2 154 39.6
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 2.2e-17 93.2 137 39.4
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.9e-17 92.8 127 39.4
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 3.8e-17 92.4 129 40.3
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 4.9e-17 92.0 127 42.5
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.9e-17 92.0 152 36.2
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 4.9e-17 92.0 152 37.5
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 4.9e-17 92.0 127 40.2
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 6.5e-17 91.7 128 35.9
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 6.5e-17 91.7 128 41.4
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.5e-17 91.7 128 40.6
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.4e-16 90.5 135 39.3
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 1.9e-16 90.1 126 42.9
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.9e-16 90.1 127 40.2
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 2.5e-16 89.7 147 36.1
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 2.5e-16 89.7 144 40.3
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 3.2e-16 89.4 147 36.1
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.2e-16 89.0 128 40.6
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.2e-15 87.4 128 35.2
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 1.2e-15 87.4 126 40.5
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 1.6e-15 87.0 127 37.8
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.7e-15 86.3 128 37.5
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 3.5e-15 85.9 147 36.1
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 4.6e-15 85.5 145 35.9
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 6.0e-15 85.1 128 34.4
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 6.0e-15 85.1 133 36.1
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 7.9e-15 84.7 127 41.7
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 7.9e-15 84.7 147 36.1
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.3e-14 83.2 162 32.7
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 3.0e-14 82.8 126 35.7
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 3.9e-14 82.4 147 34.7
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 3.9e-14 82.4 127 40.2
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 6.7e-14 81.6 128 31.2
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 6.7e-14 81.6 147 32.7
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 1.5e-13 80.5 127 40.2
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.9e-13 80.1 144 32.6
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.3e-13 79.0 160 33.8
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.3e-13 79.0 160 33.8
CSS0023144 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.2e-12 76.6 116 39.7
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 2.2e-12 76.6 169 33.7
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 4.8e-12 75.5 147 32.7
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 4.8e-12 75.5 147 32.7
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 6.3e-12 75.1 126 33.3
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 6.3e-12 75.1 147 32.0
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.2e-12 74.7 102 45.1
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 2.4e-11 73.2 147 32.0
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 2.4e-11 73.2 127 33.1
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 6.9e-11 71.6 125 35.2
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 1.2e-10 70.9 122 31.1
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.0e-09 67.8 95 36.8
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 2.2e-09 66.6 120 31.7
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 5.0e-09 65.5 144 31.2
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 1.4e-08 63.9 100 39.0
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.8e-06 57.0 64 51.6


User provided reference genes

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