Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 4.5e-71 271.2 137 100.0
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 2.4e-24 115.9 76 69.7
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 5.9e-23 111.3 74 70.3
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 5.0e-22 108.2 75 68.0
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 2.5e-21 105.9 80 65.0
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 4.2e-21 105.1 80 62.5
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 7.2e-21 104.4 80 62.5
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 7.2e-21 104.4 75 68.0
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.2e-20 103.6 75 66.7
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.6e-20 103.2 75 65.3
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.6e-20 103.2 75 69.3
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.6e-20 103.2 75 65.3
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 2.7e-20 102.4 72 68.1
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 3.6e-20 102.1 80 61.2
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 3.6e-20 102.1 75 68.0
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 3.6e-20 102.1 75 68.0
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 3.6e-20 102.1 73 65.8
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 3.6e-20 102.1 75 65.3
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 4.7e-20 101.7 75 64.0
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 4.7e-20 101.7 80 63.8
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 6.1e-20 101.3 80 61.2
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 6.1e-20 101.3 75 66.7
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 6.1e-20 101.3 80 61.2
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 8.0e-20 100.9 75 64.0
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 8.0e-20 100.9 75 68.0
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 1.0e-19 100.5 73 65.8
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.4e-19 100.1 75 64.0
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 1.4e-19 100.1 75 64.0
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 2.3e-19 99.4 80 60.0
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 3.0e-19 99.0 80 56.2
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 4.0e-19 98.6 88 53.4
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 4.0e-19 98.6 79 59.5
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 5.2e-19 98.2 80 58.8
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 6.8e-19 97.8 72 65.3
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 6.8e-19 97.8 75 65.3
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 6.8e-19 97.8 80 57.5
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 6.8e-19 97.8 75 60.0
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 1.2e-18 97.1 80 58.8
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 1.2e-18 97.1 77 59.7
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-18 97.1 75 62.7
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-18 97.1 75 62.7
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-18 97.1 75 62.7
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 1.2e-18 97.1 75 60.0
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 1.5e-18 96.7 75 62.7
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.5e-18 96.7 75 62.7
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 2.0e-18 96.3 80 61.2
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 2.0e-18 96.3 75 64.0
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.0e-18 96.3 75 60.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.0e-18 96.3 80 60.0
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 2.6e-18 95.9 73 61.6
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 3.4e-18 95.5 75 61.3
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 5.7e-18 94.7 75 62.7
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 7.5e-18 94.4 75 62.7
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 7.5e-18 94.4 72 63.9
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.5e-18 94.4 73 58.9
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 9.7e-18 94.0 75 64.0
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 1.3e-17 93.6 80 58.8
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.7e-17 93.2 80 57.5
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.7e-17 93.2 75 57.3
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 2.2e-17 92.8 81 60.5
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 2.2e-17 92.8 80 58.8
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 2.8e-17 92.4 79 63.3
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 2.8e-17 92.4 80 57.5
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 2.8e-17 92.4 73 64.4
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 3.7e-17 92.0 80 56.2
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.8e-17 91.7 75 58.7
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 8.3e-17 90.9 73 60.3
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 8.3e-17 90.9 73 60.3
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 8.3e-17 90.9 73 60.3
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 8.3e-17 90.9 73 60.3
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 8.3e-17 90.9 73 60.3
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 8.3e-17 90.9 74 62.2
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 1.1e-16 90.5 75 58.7
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 1.4e-16 90.1 73 58.9
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.4e-16 90.1 73 61.6
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.4e-16 90.1 75 58.7
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 1.4e-16 90.1 75 58.7
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 2.4e-16 89.4 80 57.5
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 3.1e-16 89.0 75 60.0
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 4.1e-16 88.6 80 55.0
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 7.0e-16 87.8 75 58.7
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.6e-15 86.7 75 54.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 2.0e-15 86.3 73 52.1
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.0e-15 86.3 75 56.0
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 3.5e-15 85.5 73 56.2
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 4.5e-15 85.1 75 57.3
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 7.7e-15 84.3 80 51.2
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 2.2e-14 82.8 75 54.7
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 5.0e-14 81.6 75 53.3
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 6.5e-14 81.3 73 57.5
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 8.5e-14 80.9 75 50.7
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 8.5e-14 80.9 80 52.5
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 1.1e-13 80.5 52 67.3
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 1.9e-13 79.7 72 54.2
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 5.5e-13 78.2 75 56.0
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.6e-12 76.6 80 47.5
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.1e-12 76.3 75 46.7
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.4e-11 73.6 73 50.7
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 2.3e-11 72.8 55 63.6
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 2.0e-10 69.7 60 60.0
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 6.3e-09 64.7 73 38.4
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 4.1e-08 62.0 75 42.7
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 7.0e-08 61.2 49 57.1


User provided reference genes

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