Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 1.6e-138 496.1 254 100.0
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.1e-27 127.9 151 47.7
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 2.8e-26 123.2 188 43.1
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 1.1e-25 121.3 170 45.3
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.4e-25 120.9 172 44.2
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.0e-25 119.4 155 45.8
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 1.5e-24 117.5 158 45.6
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 8.4e-23 111.7 162 45.1
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 1.4e-22 110.9 176 42.6
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.4e-22 110.9 137 48.9
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 4.2e-22 109.4 142 45.8
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.4e-22 109.0 132 47.7
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 7.1e-22 108.6 133 47.4
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 1.7e-20 104.0 184 40.2
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.7e-20 104.0 136 47.1
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 1.7e-20 104.0 129 52.7
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.0e-20 103.2 136 46.3
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 3.0e-20 103.2 155 40.6
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.0e-20 103.2 171 40.9
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 3.0e-20 103.2 152 43.4
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 5.1e-20 102.4 173 39.3
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 5.1e-20 102.4 138 44.2
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 8.7e-20 101.7 136 45.6
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 1.5e-19 100.9 167 41.9
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.5e-19 100.9 167 41.9
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 1.5e-19 100.9 139 45.3
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 3.3e-19 99.8 154 41.6
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 4.3e-19 99.4 167 40.1
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 5.6e-19 99.0 154 43.5
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 5.6e-19 99.0 125 46.4
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 9.6e-19 98.2 157 42.0
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.6e-18 96.3 161 41.0
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 4.8e-18 95.9 162 38.3
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 4.8e-18 95.9 173 38.7
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 1.4e-17 94.4 158 39.9
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 1.8e-17 94.0 138 44.2
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.4e-17 93.6 160 40.0
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 2.4e-17 93.6 168 39.3
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 4.0e-17 92.8 134 41.8
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 5.3e-17 92.4 176 36.4
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 9.0e-17 91.7 169 35.5
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 9.0e-17 91.7 176 36.4
SHI11263 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-16 91.3 62 79.0
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 7.6e-16 88.6 143 39.2
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 7.6e-16 88.6 161 39.1
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 7.6e-16 88.6 125 40.0
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 9.9e-16 88.2 169 34.3
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 9.9e-16 88.2 134 41.8
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 1.3e-15 87.8 153 40.5
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 1.7e-15 87.4 104 47.1
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 3.8e-15 86.3 153 39.2
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 4.9e-15 85.9 153 39.2
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 4.9e-15 85.9 132 40.9
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 6.4e-15 85.5 152 39.5
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.1e-14 84.7 130 40.8
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 1.4e-14 84.3 154 39.6
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 2.4e-14 83.6 136 37.5
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 2.4e-14 83.6 152 39.5
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 2.4e-14 83.6 147 38.1
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.2e-14 82.8 131 41.2
SHI15061 Sapria himalayana HOM05D000006 ORTHO05D000001 7.1e-14 82.0 62 72.6
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 9.3e-14 81.6 128 41.4
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.2e-13 81.3 166 36.7
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 1.6e-13 80.9 153 37.3
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 2.1e-13 80.5 136 44.1
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.7e-13 80.1 161 37.3
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 7.9e-13 78.6 129 41.1
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 6.7e-12 75.5 121 38.8
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 8.7e-12 75.1 169 34.3
SHI35716 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-11 74.7 110 43.6
SHI04396 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-11 74.3 84 54.8
SHI17089 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-11 73.9 107 46.7
SHI27635 Sapria himalayana HOM05D000006 ORTHO05D000001 1.9e-11 73.9 87 50.6
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.9e-11 73.9 136 37.5
SHI18403 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-11 73.6 109 45.0
SHI29710 Sapria himalayana HOM05D000006 ORTHO05D000001 2.5e-11 73.6 75 57.3
SHI05342 Sapria himalayana HOM05D000006 ORTHO05D000001 4.3e-11 72.8 109 45.9
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 5.6e-11 72.4 138 40.6
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 7.4e-11 72.0 153 37.3
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 9.6e-11 71.6 132 37.1
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 9.6e-11 71.6 156 34.6
SHI06156 Sapria himalayana HOM05D000006 ORTHO05D000001 9.6e-11 71.6 98 46.9
SHI20814 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 71.2 109 43.1
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.1e-10 70.5 174 31.6
SHI54015 Sapria himalayana HOM05D000006 ORTHO05D000001 2.1e-10 70.5 109 43.1
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 6.2e-10 68.9 137 39.4
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 6.2e-10 68.9 120 35.8
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.1e-09 68.2 146 34.2
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.4e-09 67.8 106 41.5
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.4e-09 67.8 106 41.5
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 1.4e-09 67.8 151 35.1
SHI03734 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-09 67.8 109 42.2
SHI10036 Sapria himalayana HOM05D000006 ORTHO05D000001 1.4e-09 67.8 80 50.0
SHI13085 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-09 67.8 80 51.2
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.8e-09 67.4 146 34.2
SHI15865 Sapria himalayana HOM05D000006 ORTHO05D000001 1.8e-09 67.4 86 51.2
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 1.8e-09 67.4 119 39.5
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 2.4e-09 67.0 133 34.6
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 2.4e-09 67.0 161 33.5
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 2.4e-09 67.0 161 31.7
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.0e-09 66.2 146 33.6
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 4.0e-09 66.2 127 38.6
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 5.3e-09 65.9 128 34.4
SHI02588 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-09 65.9 108 41.7
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 6.9e-09 65.5 108 42.6
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 6.9e-09 65.5 164 32.3
SHI18286 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-09 65.5 109 41.3
SHI07255 Sapria himalayana HOM05D000006 ORTHO05D000001 9.0e-09 65.1 109 41.3
SHI10179 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-09 65.1 107 43.0
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 1.2e-08 64.7 171 28.7
SHI04411 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-08 63.9 33 90.9
SHI25932 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-08 62.4 108 40.7
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 9.9e-08 61.6 177 32.2
SHI00845 Sapria himalayana HOM05D000006 ORTHO05D000001 2.2e-07 60.5 33 87.9
SHI16650 Sapria himalayana HOM05D000006 ORTHO05D000001 2.2e-07 60.5 109 38.5
SHI02650 Sapria himalayana HOM05D000006 ORTHO05D000001 2.9e-07 60.1 88 42.0
SHI32575 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-07 59.7 34 85.3
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 4.9e-07 59.3 162 27.8
SHI10435 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-07 59.3 33 87.9
SHI01548 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 58.2 33 84.8
SHI10285 Sapria himalayana HOM05D000006 ORTHO05D000001 1.9e-06 57.4 107 39.3
SHI10925 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 57.4 33 84.8
SHI16901 Sapria himalayana HOM05D000006 ORTHO05D000001 2.4e-06 57.0 33 84.8
SHI31254 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 33 84.8
SHI32804 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-06 56.6 34 82.4
SHI01827 Sapria himalayana HOM05D000006 ORTHO05D000001 4.2e-06 56.2 98 40.8
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 5.5e-06 55.8 134 31.3
SHI09815 Sapria himalayana HOM05D000006 ORTHO05D000001 5.5e-06 55.8 33 81.8
SHI13282 Sapria himalayana HOM05D000006 ORTHO05D000001 5.5e-06 55.8 33 81.8
SHI27968 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-06 55.8 29 89.7
SHI24758 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-06 55.5 34 79.4
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 9.3e-06 55.1 161 26.7
SHI20721 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-06 55.1 33 81.8
SHI31413 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-06 55.1 106 38.7
SHI33902 Sapria himalayana HOM05D000006 ORTHO05D000001 9.3e-06 55.1 108 38.0


User provided reference genes

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