Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10676 Sapria himalayana HOM05D000147 ORTHO05D001254 9.2e-37 156.4 79 100.0
COL.COLO4_28089 Corchorus olitorius HOM05D000147 ORTHO05D001254 1.3e-09 66.2 54 53.7
Duzib068G0989 Durio zibethinus HOM05D000147 ORTHO05D001254 1.3e-09 66.2 54 53.7
CiPaw.11G008700 Carya illinoinensis HOM05D000147 ORTHO05D001254 1.6e-09 65.9 58 50.0
Dinv04876 Davidia involucrata HOM05D000147 ORTHO05D001254 2.1e-09 65.5 58 51.7
Eucgr.K02736 Eucalyptus grandis HOM05D000147 ORTHO05D001254 2.1e-09 65.5 58 50.0
Thecc.03G127300 Theobroma cacao HOM05D000147 ORTHO05D001254 2.1e-09 65.5 54 53.7
vmacro19210 Vaccinium macrocarpon HOM05D000147 ORTHO05D001254 4.8e-09 64.3 54 53.7
GSVIVG01008524001 Vitis vinifera HOM05D000147 ORTHO05D001254 4.8e-09 64.3 58 50.0
Sc04g0000710 Simmondsia chinensis HOM05D000147 ORTHO05D001254 6.2e-09 63.9 56 51.8
Atru.chr9.1075 Acer truncatum HOM05D000147 ORTHO05D001254 1.1e-08 63.2 54 51.9
Cpa.g.sc964.1 Carica papaya HOM05D000147 ORTHO05D001254 1.1e-08 63.2 54 50.0
Lalb_Chr13g0297301 Lupinus albus HOM05D000147 ORTHO05D001254 1.1e-08 63.2 54 51.9
THA.LOC104803146 Tarenaya hassleriana HOM05D000147 ORTHO05D001254 1.4e-08 62.8 65 47.7
CANSAT80G0650 Cannabis sativa HOM05D000147 ORTHO05D001254 1.8e-08 62.4 55 49.1
Duzib084G0966 Durio zibethinus HOM05D000147 ORTHO05D001254 2.4e-08 62.0 54 50.0
Duzib205G0476 Durio zibethinus HOM05D000147 ORTHO05D001254 2.4e-08 62.0 59 44.1
Glyma.06G171000 Glycine max HOM05D000147 ORTHO05D001254 2.4e-08 62.0 54 51.9
Cc04_g10060 Coffea canephora HOM05D000147 ORTHO05D001254 4.0e-08 61.2 51 51.0
Dinv11160 Davidia involucrata HOM05D000147 ORTHO05D001254 4.0e-08 61.2 58 50.0
Sabra12G0070500 Salix brachista HOM05D000147 ORTHO05D001254 4.0e-08 61.2 51 56.9
TAR374G0574 Trochodendron aralioides HOM05D000147 ORTHO05D001254 4.0e-08 61.2 61 44.3
CiPaw.12G042000 Carya illinoinensis HOM05D000147 ORTHO05D001254 5.3e-08 60.8 55 49.1
Manes.14G052300 Manihot esculenta HOM05D000147 ORTHO05D001254 5.3e-08 60.8 55 50.9
AUR62029636 Chenopodium quinoa HOM05D000147 ORTHO05D001254 6.9e-08 60.5 58 44.8
Migut.D01258 Erythranthe guttata HOM05D000147 ORTHO05D001254 6.9e-08 60.5 56 46.4
Manes.06G118400 Manihot esculenta HOM05D000147 ORTHO05D001254 6.9e-08 60.5 62 48.4
TAR622G1241 Trochodendron aralioides HOM05D000147 ORTHO05D001254 6.9e-08 60.5 61 42.6
MD06G1143300 Malus domestica HOM05D000147 ORTHO05D001254 9.0e-08 60.1 55 50.9
MD14G1158300 Malus domestica HOM05D000147 ORTHO05D001254 9.0e-08 60.1 55 50.9
PGR044G0287 Punica granatum HOM05D000147 ORTHO05D001254 9.0e-08 60.1 61 44.3
QL10p004049 Quercus lobata HOM05D000147 ORTHO05D001254 9.0e-08 60.1 61 41.0
Gohir.A07G051600 Gossypium hirsutum HOM05D000147 ORTHO05D001254 1.2e-07 59.7 51 51.0
Gohir.D07G056000 Gossypium hirsutum HOM05D000147 ORTHO05D001254 1.2e-07 59.7 51 51.0
Gorai.001G059400 Gossypium raimondii HOM05D000147 ORTHO05D001254 1.2e-07 59.7 51 51.0
Phvul.009G167100 Phaseolus vulgaris HOM05D000147 ORTHO05D001254 1.2e-07 59.7 54 50.0
Rhsim08G0188900 Rhododendron simsii HOM05D000147 ORTHO05D001254 1.2e-07 59.7 58 44.8
Sabra15G0115600 Salix brachista HOM05D000147 ORTHO05D001254 1.2e-07 59.7 87 43.7
AUR62025922 Chenopodium quinoa HOM05D000147 ORTHO05D001254 1.5e-07 59.3 58 44.8
MELO3C002356.2 Cucumis melo HOM05D000147 ORTHO05D001254 1.5e-07 59.3 58 43.1
CsaV3_1G009590 Cucumis sativus L. HOM05D000147 ORTHO05D001254 1.5e-07 59.3 58 43.1
Lalb_Chr07g0183371 Lupinus albus HOM05D000147 ORTHO05D001254 1.5e-07 59.3 54 50.0
Potri.015G094100 Populus trichocarpa HOM05D000147 ORTHO05D001254 1.5e-07 59.3 58 46.6
VMungo1215G0052 Vigna mungo HOM05D000147 ORTHO05D001254 1.5e-07 59.3 54 46.3
Actinidia33105 Actinidia chinensis HOM05D000147 ORTHO05D001254 2.0e-07 58.9 58 46.6
ECA246G2694 Erigeron canadensis HOM05D000147 ORTHO05D001254 2.0e-07 58.9 62 40.3
ClCG03G003710 Citrullus lanatus HOM05D000147 ORTHO05D001254 2.6e-07 58.5 55 43.6
Nitab4.5_0001311g0040 Nicotiana tabacum HOM05D000147 ORTHO05D001254 2.6e-07 58.5 54 44.4
Potri.012G096300 Populus trichocarpa HOM05D000147 ORTHO05D001254 2.6e-07 58.5 55 49.1
arahy.Tifrunner.gnm1.ann1.C4VIYD Arachis hypogaea HOM05D000147 ORTHO05D001254 3.4e-07 58.2 54 48.1
CSS0038155 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D001254 3.4e-07 58.2 58 46.6
Ciclev10018546m.g Citrus clementina HOM05D000147 ORTHO05D001254 3.4e-07 58.2 51 49.0
Glyma.04G194900 Glycine max HOM05D000147 ORTHO05D001254 3.4e-07 58.2 54 48.1
Glyma.05G047400 Glycine max HOM05D000147 ORTHO05D001254 3.4e-07 58.2 54 46.3
Nn4g21994 Nelumbo nucifera HOM05D000147 ORTHO05D001254 3.4e-07 58.2 56 46.4
Phvul.003G210300 Phaseolus vulgaris HOM05D000147 ORTHO05D001254 3.4e-07 58.2 54 46.3
Prupe.5G152500 Prunus persica HOM05D000147 ORTHO05D001254 3.4e-07 58.2 55 47.3
Ah.11g045410 Amaranthus hybridus HOM05D000147 ORTHO05D001254 4.5e-07 57.8 58 43.1
EL10As4g23409 Beta vulgaris HOM05D000147 ORTHO05D001254 4.5e-07 57.8 58 44.8
Lj1g0001991 Lotus japonicus HOM05D000147 ORTHO05D001254 5.8e-07 57.4 54 44.4
Haze_07230 Corylus avellana HOM05D000147 ORTHO05D001254 7.6e-07 57.0 55 43.6
VMungo1309G2384 Vigna mungo HOM05D000147 ORTHO05D001254 7.6e-07 57.0 54 46.3
Nn4g22355 Nelumbo nucifera HOM05D000147 ORTHO05D001254 9.9e-07 56.6 50 50.0
Peaxi162Scf00089g00241 Petunia axillaris HOM05D000147 ORTHO05D001254 9.9e-07 56.6 54 46.3
RcHm_v2.0_Chr7g0190401 Rosa chinensis HOM05D000147 ORTHO05D001254 9.9e-07 56.6 58 43.1
SalBow1G8661 Salvia bowleyana HOM05D000147 ORTHO05D001254 9.9e-07 56.6 59 44.1
FAN13G0766 Fragaria x ananassa HOM05D004543 ORTHO05D006042 1.3e-06 56.2 58 41.4
Ca_24506_v3 Cicer arietinum L. HOM05D000147 ORTHO05D001254 1.7e-06 55.8 54 46.3
SGA_v2.0_scaffold5G02871 Striga asiatica HOM05D000147 ORTHO05D001254 1.7e-06 55.8 58 43.1
FAN08G1383 Fragaria x ananassa HOM05D000147 ORTHO05D001254 2.2e-06 55.5 58 41.4
FAN18G3295 Fragaria x ananassa HOM05D004543 ORTHO05D006042 2.2e-06 55.5 58 41.4
Lj9C478G14 Lonicera japonica HOM05D000147 ORTHO05D001254 2.2e-06 55.5 54 48.1
Sed0024140 Sechium edule HOM05D000147 ORTHO05D001254 2.2e-06 55.5 55 41.8
Actinidia25585 Actinidia chinensis HOM05D000147 ORTHO05D001254 2.9e-06 55.1 45 53.3
FvH4_5g08070 Fragaria vesca HOM05D000147 ORTHO05D001254 2.9e-06 55.1 55 41.8
Hund02430 Selenicereus undatus HOM05D000147 ORTHO05D001254 2.9e-06 55.1 54 44.4
Solyc03g110900.4 Solanum lycopersicum HOM05D000147 ORTHO05D001254 2.9e-06 55.1 54 42.6
Sopen03g030090 Solanum pennellii HOM05D000147 ORTHO05D001254 2.9e-06 55.1 54 42.6
FAN04G1665 Fragaria x ananassa HOM05D000147 ORTHO05D001254 3.8e-06 54.7 58 39.7
Glyma.17G129200 Glycine max HOM05D000147 ORTHO05D001254 4.9e-06 54.3 54 42.6
Lalb_Chr08g0237081 Lupinus albus HOM05D000147 ORTHO05D001254 4.9e-06 54.3 54 42.6
Nitab4.5_0011188g0030 Nicotiana tabacum HOM05D000147 ORTHO05D001254 6.4e-06 53.9 54 44.4


User provided reference genes

Program Settings