Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 1.9e-253 878.6 427 100.0
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.1e-96 357.8 422 46.9
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.2e-93 347.8 438 46.6
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 3.4e-93 346.3 380 48.9
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.3e-92 344.4 444 44.4
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.2e-92 343.6 433 44.8
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 8.4e-92 341.7 421 47.5
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.1e-91 341.3 413 46.7
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.1e-91 341.3 390 47.7
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-91 340.9 444 44.6
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.4e-91 340.9 430 46.7
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-90 337.4 422 45.0
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 3.5e-90 336.3 427 44.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 3.5e-90 336.3 420 46.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.5e-90 336.3 431 45.7
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 4.6e-90 335.9 453 43.5
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.3e-89 334.3 406 46.3
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.1e-89 332.4 415 46.3
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.6e-89 332.0 428 44.6
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.1e-88 331.3 439 46.2
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.9e-88 330.5 402 47.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 4.3e-88 329.3 426 45.3
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 9.6e-88 328.2 378 48.7
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 9.6e-88 328.2 422 45.5
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.3e-87 327.8 422 45.7
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.6e-87 327.4 468 43.2
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.8e-87 326.6 422 45.3
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.8e-87 326.6 422 45.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 4.8e-87 325.9 434 44.7
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.8e-86 323.9 437 43.9
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 3.1e-86 323.2 451 44.8
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 4.0e-86 322.8 445 43.6
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.9e-86 322.0 412 45.4
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 9.0e-86 321.6 421 44.2
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 5.8e-85 318.9 443 43.3
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 2.2e-84 317.0 435 43.7
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 3.8e-84 316.2 436 43.1
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.1e-83 314.7 427 42.4
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 5.4e-83 312.4 422 44.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 7.1e-83 312.0 429 43.6
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.6e-82 310.8 448 41.3
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 6.0e-82 308.9 380 46.3
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.3e-81 307.8 403 46.2
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 5.1e-81 305.8 388 46.6
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 6.6e-81 305.4 432 43.3
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.5e-80 304.3 488 40.8
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 2.1e-79 300.4 438 40.9
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 2.8e-79 300.1 421 41.8
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.8e-79 300.1 408 43.1
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 8.1e-79 298.5 421 43.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.2e-77 294.7 429 42.7
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 1.5e-77 294.3 436 40.1
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 7.6e-77 292.0 417 42.2
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.3e-76 291.2 419 42.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 4.2e-75 286.2 413 42.6
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.1e-75 285.4 456 39.5
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.6e-74 284.3 413 41.6
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.1e-74 283.9 419 42.2
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 4.6e-74 282.7 420 41.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 7.9e-74 282.0 421 41.3
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.3e-73 281.2 413 41.4
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 2.3e-73 280.4 407 41.5
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 3.0e-73 280.0 462 37.4
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 5.1e-73 279.3 407 41.8
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 5.1e-73 279.3 415 41.7
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 6.7e-73 278.9 435 40.5
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.5e-72 277.7 415 41.2
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 3.3e-72 276.6 434 39.6
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 9.6e-72 275.0 402 41.8
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 8.1e-71 271.9 408 41.7
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.4e-70 271.2 433 41.6
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 5.3e-70 269.2 411 40.4
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 2.0e-69 267.3 416 39.9
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 3.4e-69 266.5 412 40.8
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 3.8e-68 263.1 433 38.1
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 4.9e-68 262.7 460 37.4
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 8.4e-68 261.9 408 41.7
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 9.3e-67 258.5 416 39.4
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 4.6e-66 256.1 407 38.6
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 1.8e-65 254.2 388 38.9
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.6e-63 247.7 536 35.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 3.7e-63 246.5 386 39.9
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 1.1e-62 245.0 248 53.2
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 7.6e-61 238.8 251 51.8
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.8e-57 227.6 432 37.0
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 7.7e-53 212.2 419 34.8
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 5.0e-52 209.5 236 47.5
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.7e-50 203.8 432 34.7
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.8e-49 198.7 228 48.2
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 5.7e-48 196.1 314 42.0
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 6.3e-47 192.6 257 44.4
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.4e-46 190.7 444 30.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 1.2e-45 188.3 389 32.6
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.2e-42 178.3 311 39.2
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.7e-42 176.4 167 50.3
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.1e-41 172.9 324 38.0
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 9.7e-40 168.7 178 46.1
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 3.7e-39 166.8 374 31.3
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 8.2e-39 165.6 188 45.2
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.1e-38 165.2 154 51.9
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.0e-37 161.0 270 39.6
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 7.7e-37 159.1 134 57.5
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 7.7e-37 159.1 144 61.8
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 3.2e-35 153.7 156 57.1
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 5.5e-35 152.9 149 56.4
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.0e-33 148.7 144 58.3
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.4e-33 148.3 144 57.6
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.4e-33 148.3 481 26.4
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 1.8e-33 147.9 146 55.5
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.2e-31 141.0 145 53.1
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.7e-31 140.2 188 41.5
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.7e-31 140.2 188 41.5
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 2.6e-29 134.0 210 35.2
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 5.9e-29 132.9 152 49.3
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 7.7e-29 132.5 129 45.0
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 8.5e-28 129.0 141 48.9
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 5.5e-27 126.3 273 35.9
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 6.1e-26 122.9 145 39.3
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 2.3e-25 120.9 142 47.9
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 9.8e-24 115.5 266 34.6
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.2e-23 114.4 142 34.5
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 4.8e-23 113.2 104 54.8
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 1.6e-21 108.2 128 50.8
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.3e-20 105.1 127 35.4
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 6.5e-20 102.8 133 43.6
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.5e-19 101.7 178 39.9
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.9e-19 101.3 149 40.9
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 5.7e-16 89.7 91 49.5
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.2e-13 82.0 146 39.0
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.5e-11 75.1 125 39.2
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 7.2e-11 72.8 131 39.7
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.6e-10 71.6 167 31.1
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 8.0e-10 69.3 73 50.7
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 4.1e-06 57.0 48 52.1
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 4.1e-06 57.0 107 34.6


User provided reference genes

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