Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10518 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-41 172.6 90 100.0
SHI09321 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-13 79.7 55 74.5
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 8.1e-13 77.0 48 81.2
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 8.1e-13 77.0 48 79.2
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 81.2
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 1.1e-12 76.6 48 79.2
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI17120 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI26236 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-12 76.6 48 79.2
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 2.4e-12 75.5 48 77.1
SHI12783 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-12 75.5 48 77.1
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 5.3e-12 74.3 48 77.1
SHI28166 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-11 72.8 48 77.1
SHI29372 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-11 72.4 48 75.0
SHI04695 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-11 70.9 44 79.5
SHI05427 Sapria himalayana HOM05D004755 ORTHO05D006137 7.6e-11 70.5 48 75.0
SHI16741 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-10 69.7 41 82.9
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-10 69.3 44 79.5
SHI08627 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-10 68.6 48 72.9
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 8.4e-10 67.0 48 66.7
SHI17476 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-09 66.6 41 80.5
Atru.chr13.2560 Acer truncatum HOM05D000023 ORTHO05D000014 1.4e-09 66.2 48 62.5
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 3.2e-09 65.1 48 66.7
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 4.2e-09 64.7 48 60.4
SHI09712 Sapria himalayana HOM05D000023 ORTHO05D000014 7.1e-09 63.9 40 80.0
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 1.2e-08 63.2 48 64.6
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 1.2e-08 63.2 48 64.6
SHI28312 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-08 63.2 48 68.8
RcHm_v2.0_Chr7g0205361 Rosa chinensis HOM05D000023 ORTHO05D000014 1.6e-08 62.8 48 58.3
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 2.1e-08 62.4 48 58.3
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 2.7e-08 62.0 48 62.5
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 6.0e-08 60.8 48 58.3
Atru.chr9.1059 Acer truncatum HOM05D000023 ORTHO05D000014 7.8e-08 60.5 48 58.3
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 7.8e-08 60.5 48 60.4
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 3.0e-07 58.5 48 56.2
FvH4_5g08812 Fragaria vesca HOM05D000023 ORTHO05D000014 3.9e-07 58.2 43 69.8
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 5.1e-07 57.8 48 60.4
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 6.6e-07 57.4 47 59.6
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 6.6e-07 57.4 47 59.6
SHI18124 Sapria himalayana HOM05D000023 ORTHO05D000014 8.7e-07 57.0 34 85.3
Sp7g11960 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.1e-06 56.6 48 60.4
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 56.2 48 56.2
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 1.9e-06 55.8 48 56.2
Oeu032447.1 Olea europaea HOM05D000023 ORTHO05D000014 1.9e-06 55.8 48 58.3
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.9e-06 55.8 48 56.2
TWI74G0763 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.9e-06 55.8 48 54.2
PSO017G6237 Papaver somniferum HOM05D000023 ORTHO05D000014 2.5e-06 55.5 48 54.2
PSO478G0613 Papaver somniferum HOM05D000023 ORTHO05D000014 2.5e-06 55.5 48 54.2
Atru.chr13.2538 Acer truncatum HOM05D000023 ORTHO05D000014 4.3e-06 54.7 42 59.5
COL.COLO4_21793 Corchorus olitorius HOM05D000023 ORTHO05D000014 4.3e-06 54.7 48 54.2
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 4.3e-06 54.7 46 54.3
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 5.6e-06 54.3 48 56.2
AUR62002256 Chenopodium quinoa HOM05D000074 ORTHO05D002365 7.3e-06 53.9 48 52.1
ClCG04G001860 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.3e-06 53.9 48 58.3
Glyma.18G197350 Glycine max HOM05D000023 ORTHO05D000014 7.3e-06 53.9 48 52.1
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-06 53.9 48 52.1
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 9.6e-06 53.5 48 56.2
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 9.6e-06 53.5 48 54.2
Sp7g14400 Schrenkiella parvula HOM05D000023 ORTHO05D000014 9.6e-06 53.5 48 56.2


User provided reference genes

Program Settings