Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10509 Sapria himalayana HOM05D003819 ORTHO05D005291 1.4e-212 742.7 380 100.0
Sabra14G0107700 Salix brachista HOM05D003819 ORTHO05D005291 6.0e-126 454.9 374 61.5
Atru.chr6.2788 Acer truncatum HOM05D003819 ORTHO05D005291 7.9e-126 454.5 381 61.7
Potri.014G142600 Populus trichocarpa HOM05D003819 ORTHO05D005291 6.7e-125 451.4 380 60.0
RcHm_v2.0_Chr2g0129761 Rosa chinensis HOM05D003819 ORTHO05D005291 1.9e-124 449.9 374 61.8
Ciclev10014472m.g Citrus clementina HOM05D003819 ORTHO05D005291 2.5e-124 449.5 375 61.1
Cfa023595 Carpinus fangiana HOM05D003819 ORTHO05D005291 9.6e-124 447.6 373 61.7
Cpa.g.sc52.168 Carica papaya HOM05D003819 ORTHO05D005291 1.1e-122 444.1 375 61.9
FAN02G3241 Fragaria x ananassa HOM05D003819 ORTHO05D005291 5.3e-122 441.8 374 59.9
COL.COLO4_33586 Corchorus olitorius HOM05D003819 ORTHO05D005291 6.9e-122 441.4 375 59.2
FvH4_6g27480 Fragaria vesca HOM05D003819 ORTHO05D005291 1.5e-121 440.3 374 59.6
CiPaw.03G195200 Carya illinoinensis HOM05D003819 ORTHO05D005291 2.0e-121 439.9 377 62.1
ClCG07G002740 Citrullus lanatus HOM05D003819 ORTHO05D005291 2.6e-121 439.5 375 61.9
FAN14G1852 Fragaria x ananassa HOM05D003819 ORTHO05D005291 5.8e-121 438.3 374 59.4
FAN05G0664 Fragaria x ananassa HOM05D003819 ORTHO05D005291 7.6e-121 438.0 374 59.6
FAN09G4766 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.0e-120 437.6 374 59.9
Prupe.3G117700 Prunus persica HOM05D003819 ORTHO05D005291 1.0e-120 437.6 382 58.9
Thecc.01G151000 Theobroma cacao HOM05D003819 ORTHO05D005291 1.7e-120 436.8 373 60.1
MELO3C018720.2 Cucumis melo HOM05D003819 ORTHO05D005291 2.9e-120 436.0 375 60.8
MD09G1236800 Malus domestica HOM05D003819 ORTHO05D005291 2.9e-120 436.0 376 59.0
GSVIVG01020711001 Vitis vinifera HOM05D003819 ORTHO05D005291 4.9e-120 435.3 377 59.2
Duzib264G1063 Durio zibethinus HOM05D003819 ORTHO05D005291 8.4e-120 434.5 373 58.7
MD17G1266700 Malus domestica HOM05D003819 ORTHO05D005291 2.5e-119 433.0 375 58.7
PGR142G0379 Punica granatum HOM05D003819 ORTHO05D005291 4.2e-119 432.2 375 60.3
QL08p041841 Quercus lobata HOM05D003819 ORTHO05D005291 4.2e-119 432.2 376 60.4
CANSAT64G0548 Cannabis sativa HOM05D003819 ORTHO05D005291 2.7e-118 429.5 374 59.1
Gorai.008G099500 Gossypium raimondii HOM05D003819 ORTHO05D005291 2.7e-118 429.5 374 59.1
Gohir.D12G091900 Gossypium hirsutum HOM05D003819 ORTHO05D005291 4.6e-118 428.7 374 59.1
CsaV3_7G005710 Cucumis sativus L. HOM05D003819 ORTHO05D005291 6.0e-118 428.3 375 59.7
Gohir.A12G077800 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.0e-117 427.6 374 58.6
Lalb_Chr22g0356941 Lupinus albus HOM05D003819 ORTHO05D005291 3.7e-115 419.1 379 56.5
Lj3g0009870 Lotus japonicus HOM05D003819 ORTHO05D005291 3.1e-114 416.0 374 58.6
HanXRQChr17g0558991 Helianthus annuus HOM05D003819 ORTHO05D005291 4.1e-114 415.6 379 54.4
C04p03960 Brassica napus HOM05D003819 ORTHO05D005291 9.0e-114 414.5 375 56.3
Lsat_1_v5_gn_8_141221 Lactuca sativa HOM05D003819 ORTHO05D005291 9.0e-114 414.5 375 55.2
Lalb_Chr03g0029931 Lupinus albus HOM05D003819 ORTHO05D005291 1.2e-113 414.1 380 58.2
VMungo1127G0295 Vigna mungo HOM05D003819 ORTHO05D005291 1.2e-113 414.1 380 57.9
Lj1P684T13 Lonicera japonica HOM05D003819 ORTHO05D005291 2.0e-113 413.3 379 57.8
Eucgr.K01130 Eucalyptus grandis HOM05D003819 ORTHO05D005291 3.4e-113 412.5 376 59.0
CSS0043691 Camellia sinensis var. sinensis HOM05D003819 ORTHO05D005291 4.5e-113 412.1 377 57.6
TPR.G4345 Trifolium pratense HOM05D003819 ORTHO05D005291 7.7e-113 411.4 376 58.5
TAR629G3160 Trochodendron aralioides HOM05D003819 ORTHO05D005291 7.7e-113 411.4 375 57.3
BolC4t22032H Brassica oleracea HOM05D003819 ORTHO05D005291 1.3e-112 410.6 402 53.5
Sed0027609 Sechium edule HOM05D003819 ORTHO05D005291 1.3e-112 410.6 379 56.5
Manes.17G056400 Manihot esculenta HOM05D003819 ORTHO05D005291 2.2e-112 409.8 373 57.1
PGSC0003DMG400035320 Solanum tuberosum HOM05D003819 ORTHO05D005291 2.9e-112 409.5 376 54.5
Actinidia11157 Actinidia chinensis HOM05D003819 ORTHO05D005291 6.5e-112 408.3 380 56.8
Nitab4.5_0000249g0240 Nicotiana tabacum HOM05D003819 ORTHO05D005291 8.5e-112 407.9 380 54.7
Phvul.011G129700 Phaseolus vulgaris HOM05D003819 ORTHO05D005291 8.5e-112 407.9 380 56.8
TWI14G0201 Tripterygium wilfordii HOM05D003819 ORTHO05D005291 7.2e-111 404.8 376 58.8
BcaB06g29258 Brassica carinata HOM05D003819 ORTHO05D005291 9.4e-111 404.4 376 55.6
Glyma.12G128600 Glycine max HOM05D003819 ORTHO05D005291 9.4e-111 404.4 380 56.1
Manes.17G056300 Manihot esculenta HOM05D003819 ORTHO05D005291 9.4e-111 404.4 379 56.5
CARHR137760 Cardamine hirsuta HOM05D003819 ORTHO05D005291 2.1e-110 403.3 379 55.9
Ca_18872_v3 Cicer arietinum L. HOM05D003819 ORTHO05D005291 2.1e-110 403.3 374 57.8
Nitab4.5_0006875g0030 Nicotiana tabacum HOM05D003819 ORTHO05D005291 2.1e-110 403.3 380 53.9
Sopen07g027110 Solanum pennellii HOM05D003819 ORTHO05D005291 2.1e-110 403.3 376 54.5
A04p32330 Brassica napus HOM05D003819 ORTHO05D005291 2.7e-110 402.9 377 55.4
BraA04t18686Z Brassica rapa HOM05D003819 ORTHO05D005291 2.7e-110 402.9 377 55.4
Rhsim06G0130800 Rhododendron simsii HOM05D003819 ORTHO05D005291 3.6e-110 402.5 381 56.4
Potri.011G066700 Populus trichocarpa HOM05D003819 ORTHO05D005291 4.6e-110 402.1 377 57.3
BcaC02g07227 Brassica carinata HOM05D003819 ORTHO05D005291 1.0e-109 401.0 376 55.6
C04p69840 Brassica napus HOM05D003819 ORTHO05D005291 1.0e-109 401.0 376 55.6
BolC4t28484H Brassica oleracea HOM05D003819 ORTHO05D005291 1.0e-109 401.0 376 55.6
Carub.0004s2507 Capsella rubella HOM05D003819 ORTHO05D005291 1.4e-109 400.6 380 56.3
MBI06_g08600_MAGBIO Magnolia biondii HOM05D003819 ORTHO05D005291 1.8e-109 400.2 376 55.9
BcaC02g12429 Brassica carinata HOM05D003819 ORTHO05D005291 6.7e-109 398.3 402 52.2
Solyc12g010900.1 Solanum lycopersicum HOM05D003819 ORTHO05D005291 6.7e-109 398.3 384 53.1
AL4G41180 Arabidopsis lyrata HOM05D003819 ORTHO05D005291 8.8e-109 397.9 380 55.3
Duzib235G0786 Durio zibethinus HOM05D003819 ORTHO05D005291 8.8e-109 397.9 378 55.3
Medtr4g080020 Medicago truncatula HOM05D003819 ORTHO05D005291 8.8e-109 397.9 374 55.6
Sopen12g006260 Solanum pennellii HOM05D003819 ORTHO05D005291 1.1e-108 397.5 384 52.9
PSO675G1769 Papaver somniferum HOM05D003819 ORTHO05D005291 2.0e-108 396.7 376 54.8
Sc21g0004140 Simmondsia chinensis HOM05D003819 ORTHO05D005291 2.5e-108 396.4 377 55.2
QL05p047385 Quercus lobata HOM05D003819 ORTHO05D005291 4.3e-108 395.6 372 57.0
Sp4g24760 Schrenkiella parvula HOM05D003819 ORTHO05D005291 9.7e-108 394.4 375 54.1
THA.LOC104802258 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 9.7e-108 394.4 380 55.5
Aqoxy1G02044 Aquilegia oxysepala HOM05D003819 ORTHO05D005291 1.3e-107 394.0 375 53.9
ECA233G0398 Erigeron canadensis HOM05D003819 ORTHO05D005291 1.7e-107 393.7 382 53.4
Gorai.010G159500 Gossypium raimondii HOM05D003819 ORTHO05D005291 1.7e-107 393.7 371 56.6
AT2G42620 Arabidopsis thaliana HOM05D003819 ORTHO05D005291 2.2e-107 393.3 376 55.1
Psat7g136560 Pisum sativum HOM05D003819 ORTHO05D005291 2.2e-107 393.3 395 55.4
COL.COLO4_31287 Corchorus olitorius HOM05D003819 ORTHO05D005291 2.8e-107 392.9 379 55.7
Dinv16776 Davidia involucrata HOM05D003819 ORTHO05D005291 2.8e-107 392.9 371 57.7
PGSC0003DMG400007856 Solanum tuberosum HOM05D003819 ORTHO05D005291 3.7e-107 392.5 386 52.6
Thecc.06G169900 Theobroma cacao HOM05D003819 ORTHO05D005291 4.8e-107 392.1 378 55.8
BcaNung03224 Brassica carinata HOM05D003819 ORTHO05D005291 8.2e-107 391.3 378 55.0
Glyma.06G277000 Glycine max HOM05D003819 ORTHO05D005291 8.2e-107 391.3 385 54.5
Sabra11G0048300 Salix brachista HOM05D003819 ORTHO05D005291 8.2e-107 391.3 378 55.6
CAN.G1148.8 Capsicum annuum HOM05D003819 ORTHO05D005291 1.1e-106 391.0 375 54.4
Aa31LG1G24420 Aethionema arabicum HOM05D003819 ORTHO05D005291 1.8e-106 390.2 379 55.1
DCAR_021294 Daucus carota HOM05D003819 ORTHO05D005291 1.8e-106 390.2 376 54.0
Migut.M00265 Erythranthe guttata HOM05D003819 ORTHO05D005291 4.1e-106 389.0 374 53.5
Nitab4.5_0013227g0010 Nicotiana tabacum HOM05D003819 ORTHO05D005291 6.9e-106 388.3 386 53.4
RcHm_v2.0_Chr2g0128401 Rosa chinensis HOM05D003819 ORTHO05D005291 1.2e-105 387.5 335 59.4
Gohir.A06G131200 Gossypium hirsutum HOM05D003819 ORTHO05D005291 2.0e-105 386.7 371 55.5
MSTRG.15087 Avicennia marina HOM05D003819 ORTHO05D005291 1.7e-104 383.6 373 51.5
Gohir.D06G137250 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.7e-104 383.6 371 56.1
Oeu058996.1 Olea europaea HOM05D003819 ORTHO05D005291 8.5e-104 381.3 384 52.6
SalBow7G4473 Salvia bowleyana HOM05D003819 ORTHO05D005291 8.5e-104 381.3 375 52.0
CiPaw.09G070200 Carya illinoinensis HOM05D003819 ORTHO05D005291 1.1e-103 380.9 370 54.3
Cc05_g08390 Coffea canephora HOM05D003819 ORTHO05D005291 7.2e-103 378.3 376 52.9
EL10Ac9g20949 Beta vulgaris HOM05D003819 ORTHO05D005291 1.0e-101 374.4 378 54.2
SGA_v2.0_scaffold9G04831 Striga asiatica HOM05D003819 ORTHO05D005291 1.0e-101 374.4 378 51.1
Cc00_g28410 Coffea canephora HOM05D003819 ORTHO05D005291 2.3e-101 373.2 376 52.7
Gohir.D10G037300 Gossypium hirsutum HOM05D003819 ORTHO05D005291 4.4e-100 369.0 379 51.5
Atru.chr10.1659 Acer truncatum HOM05D003819 ORTHO05D005291 2.2e-99 366.7 375 53.9
Gorai.011G039300 Gossypium raimondii HOM05D003819 ORTHO05D005291 2.8e-99 366.3 379 50.9
Lj3g0006196 Lotus japonicus HOM05D003819 ORTHO05D005291 3.1e-98 362.8 376 52.1
CAN.G1081.14 Capsicum annuum HOM05D003819 ORTHO05D005291 7.0e-98 361.7 376 51.9
Ah.01g003580 Amaranthus hybridus HOM05D003819 ORTHO05D005291 1.5e-97 360.5 377 54.1
AUR62042109 Chenopodium quinoa HOM05D003819 ORTHO05D005291 1.1e-95 354.4 388 51.0
Gohir.A10G036700 Gossypium hirsutum HOM05D003819 ORTHO05D005291 6.1e-94 348.6 350 52.3
Dinv40684 Davidia involucrata HOM05D003819 ORTHO05D005291 2.3e-93 346.7 384 53.4
Solyc07g055120.4 Solanum lycopersicum HOM05D003819 ORTHO05D005291 2.3e-93 346.7 376 48.9
PSO229G0146 Papaver somniferum HOM05D003819 ORTHO05D005291 8.8e-93 344.7 376 50.5
CDE10G0290 Ceratophyllum demersum HOM05D003819 ORTHO05D005291 4.4e-92 342.4 375 51.5
Ciclev10017759m.g Citrus clementina HOM05D003819 ORTHO05D005291 1.7e-91 340.5 377 50.9
Dinv07714 Davidia involucrata HOM05D003819 ORTHO05D005291 1.4e-90 337.4 375 50.7
THA.LOC104813346 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 9.1e-90 334.7 396 49.5
Haze_13379 Corylus avellana HOM05D003819 ORTHO05D005291 2.9e-88 329.7 375 50.9
Peaxi162Scf00384g00211 Petunia axillaris HOM05D003819 ORTHO05D005291 5.0e-88 328.9 380 47.6
Haze_06225 Corylus avellana HOM05D003819 ORTHO05D005291 1.7e-83 313.9 371 46.6
unitig_85.g27373 Utricularia gibba HOM05D003819 ORTHO05D005291 2.4e-82 310.1 318 49.1
Thhalv10017925m.g Eutrema salsugineum HOM05D003819 ORTHO05D005291 2.1e-78 297.0 374 47.9
SEGI_05136 Sequoiadendron giganteum HOM05D003819 ORTHO05D005291 4.8e-75 285.8 381 43.0
vmacro12379 Vaccinium macrocarpon HOM05D003819 ORTHO05D005291 3.1e-74 283.1 379 45.6
Zm00001eb376660 Zea mays HOM05D003819 ORTHO05D005291 3.5e-73 279.6 393 42.5
Zm00001eb270950 Zea mays HOM05D003819 ORTHO05D005291 1.3e-72 277.7 393 42.7
Nn1g09185 Nelumbo nucifera HOM05D003819 ORTHO05D005291 7.2e-71 271.9 244 56.1
Os06g0154200 Oryza sativa ssp. japonica HOM05D003819 ORTHO05D005291 9.5e-71 271.6 410 40.5
ATR0602G021 Amborella trichopoda HOM05D003819 ORTHO05D005291 3.6e-70 269.6 380 42.4
Peaxi162Scf00469g00034 Petunia axillaris HOM05D003819 ORTHO05D005291 1.4e-66 257.7 227 54.2
Pp3c17_1180 Physcomitrium patens HOM05D003819 ORTHO05D005291 3.1e-66 256.5 379 40.1
Oeu053232.1 Olea europaea HOM05D003819 ORTHO05D005291 5.9e-65 252.3 414 38.4
AUR62040526 Chenopodium quinoa HOM05D003819 ORTHO05D005291 1.1e-63 248.1 356 42.7
Mapoly0113s0006 Marchantia polymorpha HOM05D003819 ORTHO05D005291 2.5e-63 246.9 380 39.2
SMO118G0454 Selaginella moellendorffii HOM05D003819 ORTHO05D005291 1.2e-62 244.6 379 40.1
Lj3g0028116 Lotus japonicus HOM05D003819 ORTHO05D005291 4.9e-59 232.6 239 51.5
Atru.chr11.57 Acer truncatum HOM05D003819 ORTHO05D005291 9.9e-44 181.8 379 34.6
AagrBONN_evm.TU.Sc2ySwM_228.1793 Anthoceros agrestis HOM05D003819 ORTHO05D005291 4.6e-41 172.9 379 31.9
Cfa000614 Carpinus fangiana HOM05D003819 ORTHO05D005291 4.9e-35 152.9 237 40.1
Dinv24544 Davidia involucrata HOM05D003819 ORTHO05D005291 5.4e-34 149.4 147 55.1
FvH4_4g05521 Fragaria vesca HOM05D003819 ORTHO05D005291 1.8e-29 134.4 211 38.4
FvH4_2g05661 Fragaria vesca HOM05D003819 ORTHO05D025473 1.1e-18 98.6 119 52.1
FvH4_2g12921 Fragaria vesca HOM05D003819 ORTHO05D025473 2.1e-17 94.4 102 53.9
Actinidia10955 Actinidia chinensis HOM05D003819 ORTHO05D005291 1.0e-16 92.0 154 38.3
Nn1g05873 Nelumbo nucifera HOM05D003819 ORTHO05D005291 3.0e-16 90.5 78 60.3
Psat3g013160 Pisum sativum HOM05D003819 ORTHO05D005291 1.4e-13 81.6 66 54.5
AagrBONN_evm.TU.Sc2ySwM_228.4816 Anthoceros agrestis HOM05D003819 ORTHO05D038376 2.9e-11 73.9 218 32.6
Aqoxy7G03215 Aquilegia oxysepala HOM05D003819 ORTHO05D005291 7.1e-10 69.3 74 44.6
Haze_22749 Corylus avellana HOM05D003819 ORTHO05D005291 6.7e-08 62.8 46 65.2
Haze_02876 Corylus avellana HOM05D000448 ORTHO05D000291 1.3e-06 58.5 101 39.6
Ciclev10026180m.g Citrus clementina HOM05D003819 ORTHO05D005291 3.7e-06 57.0 124 35.5


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