Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.1e-92 343.2 166 100.0
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 4.9e-56 221.5 153 72.5
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 1.4e-55 219.9 150 69.3
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 4.2e-55 218.4 150 71.3
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.2e-54 216.9 150 68.7
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.2e-54 216.9 139 77.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 3.0e-53 212.2 160 65.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 3.9e-53 211.8 139 74.1
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.9e-53 211.8 150 70.0
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 8.7e-53 210.7 126 77.0
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 8.7e-53 210.7 150 67.3
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.1e-52 210.3 141 72.3
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.5e-52 209.9 142 71.1
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 2.5e-52 209.1 150 68.7
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.5e-52 209.1 150 68.7
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.3e-52 208.4 139 72.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 5.6e-52 208.0 141 70.9
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 7.3e-52 207.6 139 71.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 7.3e-52 207.6 126 74.6
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 9.6e-52 207.2 126 74.6
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 9.6e-52 207.2 138 71.7
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.3e-51 206.8 138 69.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.1e-51 206.1 126 74.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 2.8e-51 205.7 131 71.8
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 3.6e-51 205.3 148 68.2
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 3.6e-51 205.3 137 73.0
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 4.8e-51 204.9 156 63.5
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 4.8e-51 204.9 156 66.0
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 6.2e-51 204.5 166 60.8
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 6.2e-51 204.5 144 68.1
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 6.2e-51 204.5 139 71.9
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 8.1e-51 204.1 158 64.6
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 8.1e-51 204.1 153 66.0
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 8.1e-51 204.1 137 73.0
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.1e-50 203.8 146 65.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.1e-50 203.8 139 70.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.4e-50 203.4 126 71.4
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.8e-50 203.0 125 75.2
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.4e-50 202.6 169 61.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.4e-50 202.6 125 75.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.4e-50 202.6 144 67.4
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.4e-50 202.6 135 68.1
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 2.4e-50 202.6 125 73.6
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 3.1e-50 202.2 125 75.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 4.0e-50 201.8 153 64.7
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 4.0e-50 201.8 161 62.1
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.0e-50 201.8 136 68.4
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 4.0e-50 201.8 139 69.8
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 4.0e-50 201.8 161 63.4
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 6.9e-50 201.1 125 75.2
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 6.9e-50 201.1 136 69.1
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 9.0e-50 200.7 142 69.0
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 9.0e-50 200.7 142 69.0
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 9.0e-50 200.7 142 69.0
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.2e-49 200.3 142 69.0
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.2e-49 200.3 126 70.6
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 1.5e-49 199.9 142 69.0
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.5e-49 199.9 136 68.4
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.0e-49 199.5 142 68.3
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.0e-49 199.5 125 74.4
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.6e-49 199.1 142 68.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.6e-49 199.1 142 68.3
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 3.4e-49 198.7 162 61.1
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 4.4e-49 198.4 146 64.4
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.4e-49 198.4 171 60.8
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 5.8e-49 198.0 146 64.4
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 5.8e-49 198.0 142 67.6
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 5.8e-49 198.0 142 66.2
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 7.6e-49 197.6 162 62.3
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 7.6e-49 197.6 164 59.1
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 7.6e-49 197.6 146 64.4
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.9e-49 197.2 145 64.8
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.9e-49 197.2 145 64.8
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 9.9e-49 197.2 141 63.1
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 9.9e-49 197.2 168 58.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.3e-48 196.8 173 60.1
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.7e-48 196.4 142 67.6
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.2e-48 196.1 140 66.4
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.2e-48 196.1 160 61.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.2e-48 196.1 127 66.9
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.9e-48 195.7 134 67.2
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 2.9e-48 195.7 141 66.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 3.8e-48 195.3 144 64.6
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.4e-48 194.5 173 58.4
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.4e-48 194.5 140 66.4
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 8.4e-48 194.1 131 71.0
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.4e-47 193.4 175 58.3
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.9e-47 193.0 131 68.7
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.4e-47 192.6 139 66.9
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 9.3e-47 190.7 164 59.1
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.6e-46 189.9 145 63.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 3.5e-46 188.7 158 60.1
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.7e-45 186.4 126 65.1
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 9.6e-44 180.6 109 75.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 1.3e-43 180.3 112 74.1
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.6e-43 179.9 111 73.9
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.1e-43 179.5 154 58.4
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.6e-43 178.7 113 73.5
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.8e-43 178.3 162 57.4
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.4e-42 176.0 157 54.8
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.0e-42 175.3 136 61.0
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 6.9e-42 174.5 155 52.3
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 3.4e-41 172.2 116 67.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.8e-41 171.4 206 48.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.8e-40 168.7 116 68.1
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.8e-37 159.8 196 47.4
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.9e-37 158.7 154 50.0
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.9e-36 156.4 136 55.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.9e-36 156.4 115 64.3
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 7.4e-36 154.5 122 61.5
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.4e-34 150.2 91 72.5
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 3.1e-34 149.1 109 73.4
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 3.4e-33 145.6 109 59.6
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 6.5e-32 141.4 90 67.8
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.9e-31 139.8 113 57.5
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 9.3e-31 137.5 116 65.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 9.3e-31 137.5 102 68.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.5e-30 135.6 85 75.3
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 3.5e-30 135.6 90 70.0
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 6.0e-30 134.8 80 76.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 7.9e-30 134.4 94 72.3
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.1e-28 130.6 134 47.0
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.0e-25 119.8 73 72.6
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 5.8e-25 118.2 114 49.1
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.1e-23 114.0 106 58.5
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.5e-20 102.8 88 50.0
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 7.4e-20 101.3 111 45.0
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.8e-18 96.7 85 60.0
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 5.5e-15 85.1 64 68.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 9.4e-15 84.3 64 64.1
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 6.1e-14 81.6 169 33.1
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 3.8e-08 62.4 77 46.8
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 7.2e-07 58.2 42 66.7


User provided reference genes

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