Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10239 Sapria himalayana HOM05D006530 ORTHO05D008283 3.2e-220 768.1 379 100.0
SHI30750 Sapria himalayana HOM05D000023 ORTHO05D000014 4.7e-54 216.1 132 87.9
SHI28524 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-37 161.4 115 76.5
SHI09417 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-36 158.3 114 77.2
SHI12368 Sapria himalayana HOM05D000023 ORTHO05D000014 5.1e-32 142.9 88 87.5
SHI13828 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-24 117.5 67 88.1
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 2.3e-16 90.9 87 54.0
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 5.1e-16 89.7 145 41.4
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 8.7e-16 89.0 97 46.4
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 8.7e-16 89.0 126 37.3
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 1.9e-15 87.8 98 41.8
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 3.3e-15 87.0 85 50.6
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 4.3e-15 86.7 87 50.6
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 4.3e-15 86.7 87 50.6
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 4.3e-15 86.7 122 41.8
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 4.3e-15 86.7 125 40.8
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 7.3e-15 85.9 127 37.0
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 9.6e-15 85.5 85 49.4
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 1.3e-14 85.1 101 44.6
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 1.3e-14 85.1 94 50.0
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 1.3e-14 85.1 93 44.1
TPR.G22470 Trifolium pratense HOM05D006530 ORTHO05D008283 1.6e-14 84.7 94 41.5
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 2.1e-14 84.3 103 48.5
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 2.1e-14 84.3 112 42.9
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 2.1e-14 84.3 100 46.0
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 2.1e-14 84.3 90 44.4
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 2.1e-14 84.3 90 44.4
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 2.8e-14 84.0 119 39.5
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 2.8e-14 84.0 91 46.2
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 3.6e-14 83.6 110 46.4
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 6.2e-14 82.8 100 44.0
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 6.2e-14 82.8 100 48.0
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 8.1e-14 82.4 87 43.7
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 8.1e-14 82.4 87 43.7
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 8.1e-14 82.4 107 39.3
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 1.1e-13 82.0 90 46.7
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 1.1e-13 82.0 88 44.3
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 1.1e-13 82.0 94 45.7
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 1.4e-13 81.6 108 42.6
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 1.8e-13 81.3 91 44.0
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 1.8e-13 81.3 98 39.8
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 1.8e-13 81.3 119 40.3
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 1.8e-13 81.3 97 45.4
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 3.1e-13 80.5 97 43.3
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 3.1e-13 80.5 91 42.9
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 4.0e-13 80.1 115 37.4
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 4.0e-13 80.1 97 44.3
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 5.3e-13 79.7 91 41.8
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 5.3e-13 79.7 105 41.9
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 6.9e-13 79.3 80 43.8
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 6.9e-13 79.3 97 42.3
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 6.9e-13 79.3 127 36.2
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 6.9e-13 79.3 109 42.2
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 9.0e-13 79.0 96 41.7
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 9.0e-13 79.0 87 43.7
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 9.0e-13 79.0 87 43.7
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 9.0e-13 79.0 97 42.3
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 9.0e-13 79.0 97 43.3
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 1.2e-12 78.6 97 43.3
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 2.0e-12 77.8 86 46.5
FAN15G1469 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.0e-12 77.8 79 48.1
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 2.0e-12 77.8 79 48.1
FAN27G2805 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.0e-12 77.8 79 48.1
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 2.0e-12 77.8 91 39.6
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 2.6e-12 77.4 87 42.5
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 2.6e-12 77.4 97 38.1
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 2.6e-12 77.4 104 35.6
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 2.6e-12 77.4 98 43.9
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 3.4e-12 77.0 94 48.9
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 3.4e-12 77.0 91 40.7
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 4.5e-12 76.6 94 40.4
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 4.5e-12 76.6 90 42.2
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 4.5e-12 76.6 90 42.2
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 5.8e-12 76.3 83 43.4
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 5.8e-12 76.3 91 41.8
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 7.6e-12 75.9 76 48.7
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 7.6e-12 75.9 79 46.8
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 9.9e-12 75.5 103 39.8
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 9.9e-12 75.5 94 40.4
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 9.9e-12 75.5 98 41.8
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 9.9e-12 75.5 88 39.8
FAN03G2558 Fragaria x ananassa HOM05D006530 ORTHO05D008283 9.9e-12 75.5 79 46.8
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 9.9e-12 75.5 118 34.7
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 1.3e-11 75.1 84 41.7
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 1.3e-11 75.1 100 42.0
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 1.7e-11 74.7 93 40.9
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 1.7e-11 74.7 98 34.7
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 2.2e-11 74.3 97 42.3
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.9e-11 73.9 90 41.1
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 3.8e-11 73.6 93 40.9
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 3.8e-11 73.6 98 38.8
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 3.8e-11 73.6 100 39.0
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 8.4e-11 72.4 102 33.3
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 8.4e-11 72.4 84 45.2
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 1.4e-10 71.6 89 38.2
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 1.4e-10 71.6 100 38.0
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 2.4e-10 70.9 96 35.4
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 2.4e-10 70.9 100 39.0
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 3.2e-10 70.5 91 38.5
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 4.2e-10 70.1 87 40.2
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 5.4e-10 69.7 102 34.3
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 5.4e-10 69.7 96 42.7
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 7.1e-10 69.3 89 37.1
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 1.2e-09 68.6 100 40.0
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 2.1e-09 67.8 74 40.5
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 2.7e-09 67.4 102 31.4
SHI23852 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-09 67.4 99 45.5
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 3.0e-08 63.9 72 48.6
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 1.1e-07 62.0 83 37.3
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 4.3e-07 60.1 98 29.6
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 1.3e-06 58.5 99 32.3
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 2.1e-06 57.8 74 35.1
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 3.7e-06 57.0 105 34.3
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 3.7e-06 57.0 63 38.1


User provided reference genes

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