Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 3.3e-308 1060.8 517 100.0
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 3.9e-144 515.8 492 54.1
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.6e-142 510.4 498 53.0
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 1.3e-139 500.7 498 52.0
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 2.1e-137 493.4 492 52.0
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.2e-132 477.6 511 50.7
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.2e-131 473.4 487 50.1
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.9e-131 473.0 507 49.3
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 3.8e-131 472.6 494 51.4
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 6.5e-131 471.9 510 50.4
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.4e-130 470.7 482 51.2
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 2.5e-130 469.9 507 49.1
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 3.2e-130 469.5 497 50.9
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 9.4e-130 468.0 509 48.3
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.6e-129 466.1 507 48.9
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 6.1e-129 465.3 502 50.2
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.4e-128 464.2 508 50.6
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 3.0e-128 463.0 479 51.4
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 3.9e-128 462.6 491 51.1
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 5.1e-128 462.2 484 50.8
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 5.1e-128 462.2 493 50.7
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.6e-127 459.9 515 49.5
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 4.4e-127 459.1 498 49.6
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 5.7e-127 458.8 518 48.5
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 5.7e-127 458.8 518 48.5
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 7.4e-127 458.4 489 49.3
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 9.7e-127 458.0 382 58.4
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 1.3e-126 457.6 485 50.7
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 1.7e-126 457.2 381 59.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.8e-126 456.4 516 49.4
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 2.8e-126 456.4 518 48.1
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.8e-126 456.4 506 48.8
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 3.7e-126 456.1 518 48.3
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.7e-126 456.1 509 48.1
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 8.2e-126 454.9 518 47.9
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 8.2e-126 454.9 518 47.9
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.4e-125 454.1 506 48.8
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 3.1e-125 453.0 491 49.9
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 3.1e-125 453.0 514 49.0
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.9e-125 451.8 506 48.6
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 2.0e-124 450.3 509 49.3
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.9e-124 448.7 504 48.8
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 1.0e-123 448.0 510 47.5
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 1.3e-123 447.6 493 48.3
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.3e-123 447.6 485 50.5
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.7e-123 447.2 508 48.4
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 2.2e-123 446.8 508 49.2
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 2.2e-123 446.8 477 50.3
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 2.2e-123 446.8 376 58.8
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.1e-122 444.5 494 49.8
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.2e-122 442.6 510 47.8
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 5.5e-122 442.2 490 48.8
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.6e-121 440.7 482 50.0
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 8.0e-121 438.3 493 49.3
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.4e-120 437.6 516 48.8
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.9e-120 436.0 375 56.8
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 8.8e-120 434.9 495 47.9
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.0e-119 433.7 389 55.5
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 7.4e-119 431.8 373 56.8
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.3e-118 431.0 508 47.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.8e-118 429.1 479 47.4
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 8.2e-118 428.3 378 55.8
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 1.4e-117 427.6 516 46.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.8e-117 427.2 490 47.3
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 4.1e-117 426.0 492 48.0
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 8.5e-115 418.3 480 47.7
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 8.5e-115 418.3 375 55.5
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.1e-114 417.9 489 47.0
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.2e-113 414.5 377 53.3
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.6e-113 414.1 482 47.3
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 3.6e-113 412.9 380 53.2
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 5.2e-112 409.1 505 46.7
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 6.7e-112 408.7 351 57.8
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 8.8e-112 408.3 514 45.9
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 7.5e-111 405.2 499 44.5
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 3.7e-110 402.9 526 45.4
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 6.3e-110 402.1 381 50.9
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 3.1e-109 399.8 413 50.6
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-108 397.9 374 51.3
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 1.6e-108 397.5 413 50.1
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 2.2e-107 393.7 497 43.9
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 5.0e-107 392.5 377 52.8
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 3.2e-106 389.8 476 45.2
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 9.4e-106 388.3 498 43.2
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 3.4e-103 379.8 379 50.7
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 8.3e-102 375.2 492 44.7
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.4e-101 374.4 323 57.3
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 7.0e-101 372.1 484 40.3
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.2e-100 371.3 397 49.9
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.6e-100 370.9 485 44.1
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 1.5e-98 364.4 484 44.0
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.5e-98 363.6 513 41.7
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 1.2e-97 361.3 499 40.9
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 7.3e-90 335.5 383 47.8
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 6.1e-89 332.4 507 40.8
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 8.0e-89 332.0 493 39.6
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 2.6e-87 327.0 495 41.0
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 3.4e-87 326.6 506 38.7
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 9.8e-87 325.1 505 38.4
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 9.8e-87 325.1 503 38.8
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 2.2e-86 323.9 499 38.9
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 4.9e-86 322.8 512 38.9
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 3.2e-85 320.1 489 41.1
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.0e-83 315.1 392 44.9
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.7e-83 314.3 521 38.6
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 2.3e-83 313.9 501 37.9
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 1.1e-82 311.6 379 46.2
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 9.5e-82 308.5 482 37.1
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 1.2e-81 308.1 502 37.6
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 8.0e-81 305.4 521 37.8
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-76 291.6 461 41.9
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.5e-76 290.0 417 38.1
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.6e-75 285.8 538 34.9
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 4.3e-74 283.1 364 43.1
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 1.2e-73 281.6 346 44.5
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 8.9e-72 275.4 499 34.5
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.5e-71 274.6 512 36.1
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 5.8e-71 272.7 512 36.1
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 9.9e-71 271.9 482 38.6
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 7.6e-63 245.7 268 48.1
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.6e-63 245.7 392 37.2
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.9e-61 241.1 477 33.1
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 2.1e-52 211.1 296 42.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 4.0e-48 196.8 395 31.6
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.1e-24 117.5 127 44.9
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 2.0e-23 114.8 150 44.7
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 9.1e-08 62.8 56 62.5
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.5e-07 60.8 169 31.4
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 5.9e-07 60.1 66 59.1
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 3.8e-06 57.4 68 55.9


User provided reference genes

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