Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10095 Sapria himalayana HOM05D004734 ORTHO05D006019 4.6e-253 877.5 459 100.0
COL.COLO4_07254 Corchorus olitorius HOM05D004734 ORTHO05D006019 1.4e-57 228.0 243 51.4
Atru.chr6.3273 Acer truncatum HOM05D004734 ORTHO05D006019 6.7e-55 219.2 300 44.0
Atru.chr6.3288 Acer truncatum HOM05D004734 ORTHO05D006019 3.3e-54 216.9 304 43.8
Manes.12G058300 Manihot esculenta HOM05D004734 ORTHO05D006019 4.4e-54 216.5 239 49.4
TWI75G1245 Tripterygium wilfordii HOM05D004734 ORTHO05D006019 5.7e-54 216.1 239 50.2
Sabra02G0171200 Salix brachista HOM05D004734 ORTHO05D006019 9.7e-54 215.3 303 44.2
Ciclev10014379m.g Citrus clementina HOM05D004734 ORTHO05D006019 6.3e-53 212.6 241 50.2
Gohir.D07G174400 Gossypium hirsutum HOM05D004734 ORTHO05D006019 2.4e-52 210.7 245 46.5
Gorai.001G195000 Gossypium raimondii HOM05D004734 ORTHO05D006019 7.0e-52 209.1 245 46.5
Potri.002G223600 Populus trichocarpa HOM05D004734 ORTHO05D006019 7.0e-52 209.1 240 49.6
Duzib138G1622 Durio zibethinus HOM05D004734 ORTHO05D006019 1.3e-50 204.9 248 46.0
FAN14G4409 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.3e-50 204.9 251 47.8
Cfa014305 Carpinus fangiana HOM05D004734 ORTHO05D006019 1.7e-50 204.5 251 46.6
FAN02G4553 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.7e-50 204.5 251 47.0
RcHm_v2.0_Chr2g0157781 Rosa chinensis HOM05D004734 ORTHO05D006019 2.2e-50 204.1 244 47.1
FAN09G1456 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.9e-49 201.1 251 46.6
AL4G28410 Arabidopsis lyrata HOM05D004734 ORTHO05D006019 2.5e-49 200.7 241 45.6
Duzib211G0196 Durio zibethinus HOM05D004734 ORTHO05D006019 3.2e-49 200.3 271 45.4
FAN05G4875 Fragaria x ananassa HOM05D004734 ORTHO05D006019 3.2e-49 200.3 251 46.6
CiPaw.04G108800 Carya illinoinensis HOM05D004734 ORTHO05D006019 2.7e-48 197.2 250 44.4
AT2G32900 Arabidopsis thaliana HOM05D004734 ORTHO05D006019 6.1e-48 196.1 241 44.8
MD09G1116200 Malus domestica HOM05D004734 ORTHO05D006019 6.1e-48 196.1 244 45.9
THA.LOC104826129 Tarenaya hassleriana HOM05D004734 ORTHO05D006019 1.0e-47 195.3 241 45.2
QL01p037797 Quercus lobata HOM05D004734 ORTHO05D006019 2.3e-47 194.1 312 38.5
CARHR126840 Cardamine hirsuta HOM05D004734 ORTHO05D006019 3.0e-47 193.7 241 45.2
Aa31LG5G4570 Aethionema arabicum HOM05D004734 ORTHO05D006019 5.2e-47 193.0 241 45.6
Prupe.3G208500 Prunus persica HOM05D004734 ORTHO05D006019 5.2e-47 193.0 244 45.1
MD17G1107900 Malus domestica HOM05D004734 ORTHO05D006019 2.0e-46 191.0 253 43.5
CANSAT64G0097 Cannabis sativa HOM05D004734 ORTHO05D006019 3.3e-46 190.3 246 44.7
Carub.0004s1431 Capsella rubella HOM05D004734 ORTHO05D006019 4.4e-46 189.9 305 38.4
BcaC01g05869 Brassica carinata HOM05D004734 ORTHO05D006019 2.2e-45 187.6 241 44.0
C03p21580 Brassica napus HOM05D004734 ORTHO05D006019 2.2e-45 187.6 241 44.0
BolC3t14542H Brassica oleracea HOM05D004734 ORTHO05D006019 2.2e-45 187.6 241 44.0
Glyma.02G266800 Glycine max HOM05D004734 ORTHO05D006019 2.8e-45 187.2 239 43.5
Thhalv10016293m.g Eutrema salsugineum HOM05D004734 ORTHO05D006019 3.7e-45 186.8 242 44.6
Haze_12752 Corylus avellana HOM05D004734 ORTHO05D006019 1.1e-44 185.3 236 46.2
Sp4g15270 Schrenkiella parvula HOM05D004734 ORTHO05D006019 1.4e-44 184.9 241 44.0
BcaB01g03944 Brassica carinata HOM05D004734 ORTHO05D006019 1.8e-44 184.5 241 42.3
PGR042G3679 Punica granatum HOM05D004734 ORTHO05D006019 4.1e-44 183.3 243 42.8
Eucgr.A01088 Eucalyptus grandis HOM05D004734 ORTHO05D006019 2.7e-43 180.6 245 42.9
Sed0026816 Sechium edule HOM05D004734 ORTHO05D006019 2.7e-43 180.6 242 45.5
A03p18530 Brassica napus HOM05D004734 ORTHO05D006019 3.5e-43 180.3 242 42.6
BraA03t11112Z Brassica rapa HOM05D004734 ORTHO05D006019 3.5e-43 180.3 242 42.6
Glyma.14G050700 Glycine max HOM05D004734 ORTHO05D006019 4.5e-43 179.9 241 41.1
Phvul.008G215200 Phaseolus vulgaris HOM05D004734 ORTHO05D006019 5.9e-43 179.5 241 41.1
BcaB02g10504 Brassica carinata HOM05D004734 ORTHO05D006019 7.7e-43 179.1 241 42.7
BraA05t20212Z Brassica rapa HOM05D004734 ORTHO05D006019 1.7e-42 177.9 241 41.1
ClCG02G018160 Citrullus lanatus HOM05D004734 ORTHO05D006019 2.9e-42 177.2 242 43.0
VMungo0647G1710 Vigna mungo HOM05D004734 ORTHO05D006019 2.9e-42 177.2 293 37.2
Cpa.g.sc132.37 Carica papaya HOM05D004734 ORTHO05D006019 5.0e-42 176.4 241 43.2
TPR.G6822 Trifolium pratense HOM05D004734 ORTHO05D006019 5.0e-42 176.4 304 37.5
TAR629G0221 Trochodendron aralioides HOM05D004734 ORTHO05D006019 5.0e-42 176.4 241 45.6
MELO3C019721.2 Cucumis melo HOM05D004734 ORTHO05D006019 1.5e-41 174.9 242 43.0
Atru.chr12.2374 Acer truncatum HOM05D004734 ORTHO05D006019 2.5e-41 174.1 177 50.3
BolC4t23215H Brassica oleracea HOM05D004734 ORTHO05D006019 7.2e-41 172.6 241 41.1
A05p12730 Brassica napus HOM05D004734 ORTHO05D006019 9.4e-41 172.2 241 40.2
Actinidia09755 Actinidia chinensis HOM05D004734 ORTHO05D006019 4.0e-39 166.8 239 41.4
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 2.6e-38 164.1 246 40.7
vmacro12148 Vaccinium macrocarpon HOM05D004734 ORTHO05D006019 3.4e-38 163.7 243 42.0
Ca_06067_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 7.5e-38 162.5 306 35.6
Solyc05g043350.4 Solanum lycopersicum HOM05D004734 ORTHO05D006019 1.7e-37 161.4 238 40.3
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea HOM05D004734 ORTHO05D006019 2.8e-37 160.6 301 35.9
Cc00_g21460 Coffea canephora HOM05D004734 ORTHO05D006019 1.1e-36 158.7 299 34.4
Dinv08709 Davidia involucrata HOM05D004734 ORTHO05D006019 1.1e-36 158.7 244 40.6
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea HOM05D004734 ORTHO05D006019 2.4e-36 157.5 319 34.5
SalBow7G0507 Salvia bowleyana HOM05D004734 ORTHO05D006019 7.0e-36 156.0 251 37.8
EL10Ac9g22816 Beta vulgaris HOM05D004734 ORTHO05D006019 1.2e-35 155.2 249 39.4
Nitab4.5_0000006g0360 Nicotiana tabacum HOM05D004734 ORTHO05D006019 1.2e-35 155.2 250 37.6
Migut.A01159 Erythranthe guttata HOM05D004734 ORTHO05D006019 2.0e-35 154.5 256 37.5
Lalb_Chr10g0105531 Lupinus albus HOM05D004734 ORTHO05D006019 1.3e-34 151.8 298 33.9
Nitab4.5_0009060g0010 Nicotiana tabacum HOM05D004734 ORTHO05D006019 1.3e-34 151.8 243 38.3
CSS0018671 Camellia sinensis var. sinensis HOM05D004734 ORTHO05D006019 1.7e-34 151.4 244 39.8
Sc21g0001080 Simmondsia chinensis HOM05D004734 ORTHO05D006019 2.3e-34 151.0 251 36.7
AUR62015114 Chenopodium quinoa HOM05D004734 ORTHO05D006019 3.8e-34 150.2 304 36.2
DCAR_012916 Daucus carota HOM05D004734 ORTHO05D006019 3.8e-34 150.2 247 38.9
Nn1g07321 Nelumbo nucifera HOM05D004734 ORTHO05D006019 3.8e-34 150.2 241 37.8
Ah.01g001840 Amaranthus hybridus HOM05D004734 ORTHO05D006019 1.1e-33 148.7 311 35.0
unitig_8.g4608 Utricularia gibba HOM05D004734 ORTHO05D006019 1.5e-33 148.3 266 35.3
Peaxi162Scf00977g00315 Petunia axillaris HOM05D004734 ORTHO05D006019 1.9e-33 147.9 248 37.9
Aqoxy2G03788 Aquilegia oxysepala HOM05D004734 ORTHO05D006019 3.3e-33 147.1 253 39.5
AUR62017577 Chenopodium quinoa HOM05D004734 ORTHO05D006019 1.2e-32 145.2 310 35.5
Hund08442 Selenicereus undatus HOM05D004734 ORTHO05D006019 1.2e-32 145.2 244 36.5
CAN.G387.3 Capsicum annuum HOM05D004734 ORTHO05D006019 2.1e-32 144.4 238 37.0
Lj8A131T30 Lonicera japonica HOM05D004734 ORTHO05D006019 2.8e-32 144.1 244 40.2
C04p16650 Brassica napus HOM05D004734 ORTHO05D006019 1.0e-31 142.1 180 42.2
PSO017G2150 Papaver somniferum HOM05D004734 ORTHO05D006019 1.0e-31 142.1 252 36.1
HanXRQChr16g0508221 Helianthus annuus HOM05D004734 ORTHO05D006019 2.0e-30 137.9 291 35.4
MBI16_g26176_MAGBIO Magnolia biondii HOM05D004734 ORTHO05D006019 4.4e-30 136.7 244 36.1
Oeu054514.1 Olea europaea HOM05D004734 ORTHO05D006019 5.7e-30 136.3 249 38.2
SGA_v2.0_scaffold73G24401 Striga asiatica HOM05D004734 ORTHO05D006019 9.8e-30 135.6 253 34.0
Lsat_1_v5_gn_7_94920 Lactuca sativa HOM05D004734 ORTHO05D006019 2.8e-29 134.0 245 35.5
Rhsim06G0169400 Rhododendron simsii HOM05D004734 ORTHO05D006019 4.9e-29 133.3 244 36.9
CDE07G0136 Ceratophyllum demersum HOM05D004734 ORTHO05D006019 6.3e-29 132.9 255 34.5
HanXRQChr14g0438421 Helianthus annuus HOM05D004734 ORTHO05D006019 3.1e-28 130.6 291 35.4
GSVIVG01030526001 Vitis vinifera HOM05D004734 ORTHO05D006019 4.3e-25 120.2 304 33.2
Medtr5g084823 Medicago truncatula HOM05D004734 ORTHO05D006019 1.6e-24 118.2 177 37.9
HPP92_000196 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.0e-23 115.5 246 35.0
ATR1128G058 Amborella trichopoda HOM05D004734 ORTHO05D006019 3.0e-23 114.0 229 34.5
HPP92_028626 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.5e-22 111.7 184 38.6
HPP92_028624 Vanilla planifolia HOM05D004734 ORTHO05D006019 9.8e-22 109.0 184 38.0
TPR.G25656 Trifolium pratense HOM05D004734 ORTHO05D006019 4.9e-21 106.7 236 32.6
RcHm_v2.0_Chr0c20g0500271 Rosa chinensis HOM05D004734 ORTHO05D006019 5.8e-14 83.2 169 35.5
PSO675G0915 Papaver somniferum HOM05D004734 ORTHO05D006019 3.2e-12 77.4 150 30.7
ECA236G2537 Erigeron canadensis HOM05D004734 ORTHO05D006019 5.4e-12 76.6 122 38.5
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 9.2e-12 75.9 226 29.6


User provided reference genes

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