Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10088 Sapria himalayana HOM05D000034 ORTHO05D000037 9.0e-40 166.4 80 100.0
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 3.7e-09 64.7 44 61.4
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 6.3e-09 63.9 44 59.1
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 6.3e-09 63.9 44 59.1
EL10Ac4g08854 Beta vulgaris HOM05D000034 ORTHO05D000037 8.2e-09 63.5 44 56.8
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 8.2e-09 63.5 44 54.5
EL10Ac8g20166 Beta vulgaris HOM05D000034 ORTHO05D000037 8.2e-09 63.5 44 54.5
TPR.G19283 Trifolium pratense HOM05D001558 ORTHO05D000037 1.4e-08 62.8 44 61.4
Hma1.2p1_0308F.1_g120260 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.1e-08 61.6 45 66.7
Hma1.2p1_0672F.1_g201050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-08 61.2 45 64.4
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-08 61.2 45 64.4
EL10Ac2g03305 Beta vulgaris HOM05D000034 ORTHO05D000037 5.3e-08 60.8 44 54.5
TPR.G21816 Trifolium pratense HOM05D000034 ORTHO05D000037 5.3e-08 60.8 44 61.4
Hma1.2p1_0269F.1_g107750 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.0e-08 60.5 46 60.9
TPR.G36243 Trifolium pratense HOM05D000034 ORTHO05D000037 7.0e-08 60.5 43 58.1
arahy.Tifrunner.gnm1.ann1.4S4BCN Arachis hypogaea HOM05D000034 ORTHO05D000037 9.1e-08 60.1 44 56.8
arahy.Tifrunner.gnm1.ann1.0AP11M Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-07 59.7 53 56.6
Hma1.2p1_0091F.1_g046180 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-07 59.7 45 64.4
Hma1.2p1_1281F.1_g272570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-07 59.7 46 63.0
arahy.Tifrunner.gnm1.ann1.1B19ZJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 58.9 45 64.4
arahy.Tifrunner.gnm1.ann1.2LJR5V Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-07 58.2 44 54.5
arahy.Tifrunner.gnm1.ann1.J7EXNL Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-07 58.2 44 54.5
Hma1.2p1_0315F.1_g122270 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.5e-07 58.2 52 50.0
arahy.Tifrunner.gnm1.ann1.S4LD41 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-07 57.8 45 62.2
Atru.chr5.1524 Acer truncatum HOM05D000034 ORTHO05D000037 5.9e-07 57.4 44 59.1
arahy.Tifrunner.gnm1.ann1.MJ9A6B Arachis hypogaea HOM05D000034 ORTHO05D000037 7.7e-07 57.0 44 52.3
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.7e-07 57.0 72 44.4
Atru.chr1.2747 Acer truncatum HOM05D000034 ORTHO05D000037 1.0e-06 56.6 44 59.1
arahy.Tifrunner.gnm1.ann1.QJ6RH7 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 56.6 44 54.5
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 56.2 44 61.4
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 56.2 44 61.4
TPR.G34592 Trifolium pratense HOM05D000034 ORTHO05D000037 1.3e-06 56.2 44 56.8
arahy.Tifrunner.gnm1.ann1.1E5NJ8 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 55.8 44 59.1
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 55.8 44 59.1
arahy.Tifrunner.gnm1.ann1.G9YS9Y Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 55.8 44 59.1
arahy.Tifrunner.gnm1.ann1.RN7F5A Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-06 55.8 44 52.3
Lj3g0010919 Lotus japonicus HOM05D000034 ORTHO05D000037 1.7e-06 55.8 44 59.1
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 55.5 34 76.5
EL10Ac4g08775 Beta vulgaris HOM05D000034 ORTHO05D000037 2.2e-06 55.5 44 50.0
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-06 55.5 44 59.1
AUR62008528 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.2e-06 55.5 44 50.0
Sc05g0005320 Simmondsia chinensis HOM05D000034 ORTHO05D000037 2.2e-06 55.5 43 62.8
Atru.chr5.1595 Acer truncatum HOM05D000034 ORTHO05D000037 2.9e-06 55.1 44 52.3
arahy.Tifrunner.gnm1.ann1.0CN3DG Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-06 55.1 44 52.3
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.8e-06 54.7 44 56.8
Hma1.2p1_0609F.1_g188530 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.8e-06 54.7 44 56.8
arahy.Tifrunner.gnm1.ann1.HC597B Arachis hypogaea HOM05D000034 ORTHO05D000037 6.5e-06 53.9 44 50.0
arahy.Tifrunner.gnm1.ann1.HK1YN3 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.5e-06 53.9 44 50.0
HanXRQChr04g0123061 Helianthus annuus HOM05D000034 ORTHO05D000037 6.5e-06 53.9 42 52.4
Lj3g0004214 Lotus japonicus HOM05D000034 ORTHO05D000037 6.5e-06 53.9 44 54.5
arahy.Tifrunner.gnm1.ann1.ZI7G4V Arachis hypogaea HOM05D000034 ORTHO05D000037 8.5e-06 53.5 44 50.0
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.5e-06 53.5 44 56.8


User provided reference genes

Program Settings