Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09319 Sapria himalayana HOM05D003665 ORTHO05D364815 1.5e-71 272.7 130 100.0
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 2.3e-08 62.8 35 71.4
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 5.1e-08 61.6 50 54.0
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 6.6e-08 61.2 35 71.4
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 8.7e-08 60.8 35 68.6
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 8.7e-08 60.8 35 68.6
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 1.1e-07 60.5 35 68.6
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 1.1e-07 60.5 35 68.6
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.1e-07 60.5 35 68.6
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.1e-07 60.5 35 68.6
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.5e-07 60.1 35 68.6
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.5e-07 60.1 35 68.6
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 1.5e-07 60.1 35 68.6
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 1.5e-07 60.1 35 68.6
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 1.5e-07 60.1 35 68.6
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 1.9e-07 59.7 35 65.7
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 1.9e-07 59.7 35 65.7
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 2.5e-07 59.3 30 76.7
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 2.5e-07 59.3 40 62.5
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 2.5e-07 59.3 33 69.7
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 3.3e-07 58.9 35 65.7
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 3.3e-07 58.9 35 65.7
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 3.3e-07 58.9 35 68.6
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 3.3e-07 58.9 35 68.6
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 3.3e-07 58.9 40 60.0
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.3e-07 58.9 40 60.0
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.3e-07 58.9 40 60.0
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.3e-07 58.9 40 60.0
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.3e-07 58.9 40 60.0
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 3.3e-07 58.9 35 68.6
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 4.3e-07 58.5 50 56.0
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 4.3e-07 58.5 35 65.7
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 5.6e-07 58.2 35 68.6
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 5.6e-07 58.2 35 65.7
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 5.6e-07 58.2 40 60.0
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 7.3e-07 57.8 31 74.2
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 7.3e-07 57.8 35 65.7
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 9.6e-07 57.4 35 65.7
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 9.6e-07 57.4 35 62.9
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 1.3e-06 57.0 40 60.0
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 1.6e-06 56.6 35 62.9
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 1.6e-06 56.6 35 62.9
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.6e-06 56.6 35 65.7
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 1.6e-06 56.6 40 57.5
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 1.6e-06 56.6 40 57.5
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 2.1e-06 56.2 29 75.9
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 2.1e-06 56.2 29 75.9
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 2.1e-06 56.2 29 75.9
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 2.1e-06 56.2 29 75.9
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 65.7
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 2.1e-06 56.2 37 56.8
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 2.1e-06 56.2 35 62.9
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 2.8e-06 55.8 31 71.0
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 2.8e-06 55.8 31 71.0
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.8e-06 55.8 35 62.9
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.8e-06 55.8 35 62.9
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 2.8e-06 55.8 30 70.0
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.8e-06 55.8 31 71.0
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.8e-06 55.8 31 71.0
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 2.8e-06 55.8 29 69.0
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 3.6e-06 55.5 28 75.0
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 3.6e-06 55.5 30 70.0
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 3.6e-06 55.5 30 70.0
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 3.6e-06 55.5 26 80.8
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 3.6e-06 55.5 26 80.8
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 3.6e-06 55.5 31 67.7
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 3.6e-06 55.5 50 54.0
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 3.6e-06 55.5 31 67.7
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 3.6e-06 55.5 35 62.9
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 3.6e-06 55.5 31 67.7
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 3.6e-06 55.5 31 67.7
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 3.6e-06 55.5 31 67.7
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 3.6e-06 55.5 35 62.9
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 4.8e-06 55.1 31 71.0
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 4.8e-06 55.1 31 71.0
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 4.8e-06 55.1 31 71.0
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 4.8e-06 55.1 35 60.0
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 4.8e-06 55.1 31 71.0
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 4.8e-06 55.1 35 62.9
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 4.8e-06 55.1 40 57.5
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 4.8e-06 55.1 30 70.0
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 4.8e-06 55.1 31 71.0
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 4.8e-06 55.1 35 62.9
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 4.8e-06 55.1 35 62.9
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 4.8e-06 55.1 35 62.9
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 6.2e-06 54.7 26 80.8
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 6.2e-06 54.7 32 65.6
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 6.2e-06 54.7 35 62.9
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 6.2e-06 54.7 35 62.9
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 6.2e-06 54.7 35 62.9
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 6.2e-06 54.7 35 62.9
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 8.1e-06 54.3 35 62.9
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 8.1e-06 54.3 35 62.9
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 8.1e-06 54.3 30 70.0


User provided reference genes

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