Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09297 Sapria himalayana HOM05D000034 ORTHO05D000037 6.0e-31 136.7 63 100.0
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-21 105.9 61 80.3
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 2.5e-21 104.8 61 78.7
SHI16926 Sapria himalayana HOM05D000034 ORTHO05D000037 4.3e-21 104.0 61 78.7
SHI01772 Sapria himalayana HOM05D000034 ORTHO05D000037 5.7e-21 103.6 62 80.6
SHI02034 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-20 102.4 62 77.4
SHI22347 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-20 102.4 62 77.4
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-20 102.4 61 78.7
SHI12875 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-19 99.4 62 72.6
SHI01182 Sapria himalayana HOM05D000034 ORTHO05D000037 5.9e-18 93.6 62 71.0
SHI27128 Sapria himalayana HOM05D000034 ORTHO05D000037 7.6e-18 93.2 60 70.0
Atru.chr8.769 Acer truncatum HOM05D000034 ORTHO05D000037 1.0e-17 92.8 62 64.5
SHI33519 Sapria himalayana HOM05D000034 ORTHO05D000037 8.5e-17 89.7 62 67.7
SHI28217 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-15 85.9 56 71.4
SHI34904 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-14 81.6 46 82.6
SHI07461 Sapria himalayana HOM05D000034 ORTHO05D000037 5.1e-14 80.5 49 71.4
SHI09415 Sapria himalayana HOM05D000034 ORTHO05D000037 5.1e-14 80.5 49 73.5
GSVIVG01035763001 Vitis vinifera HOM05D000034 ORTHO05D000037 5.1e-14 80.5 52 71.2
SHI11830 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-14 80.1 44 84.1
SHI18279 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-14 80.1 55 72.7
SHI04826 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-13 78.6 48 75.0
SHI11769 Sapria himalayana HOM05D000034 ORTHO05D000037 5.7e-13 77.0 60 60.0
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.4e-13 76.6 61 55.7
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.4e-13 76.6 61 55.7
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.4e-13 76.6 61 55.7
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.4e-13 76.6 61 55.7
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.4e-13 76.6 61 55.7
SHI26241 Sapria himalayana HOM05D000240 ORTHO05D018195 7.4e-13 76.6 46 82.6
SHI33152 Sapria himalayana HOM05D000034 ORTHO05D000037 7.4e-13 76.6 52 71.2
SHI12292 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-12 75.5 41 82.9
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-12 75.1 60 55.0
SHI25914 Sapria himalayana HOM05D000034 ORTHO05D000037 2.2e-12 75.1 60 55.0
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 2.8e-12 74.7 62 54.8
SHI27467 Sapria himalayana HOM05D000034 ORTHO05D018195 3.7e-12 74.3 46 69.6
MBI10_g20855_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.1e-11 72.8 53 60.4
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-11 72.4 60 53.3
SHI29151 Sapria himalayana HOM05D000034 ORTHO05D000037 1.8e-11 72.0 60 53.3
Rhsim01G0138000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-11 71.6 60 53.3
RhsimUnG0061200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.4e-11 71.6 60 53.3
SHI02268 Sapria himalayana HOM05D000034 ORTHO05D000037 2.4e-11 71.6 60 53.3
SHI19427 Sapria himalayana HOM05D000034 ORTHO05D000037 2.4e-11 71.6 60 51.7
SHI02867 Sapria himalayana HOM05D000034 ORTHO05D000037 6.9e-11 70.1 46 73.9
Aqoxy2G01340 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.1e-11 69.7 62 48.4
SHI17513 Sapria himalayana HOM05D000034 ORTHO05D000037 9.1e-11 69.7 60 53.3
SHI21452 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-10 69.3 49 65.3
HanXRQChr16g0506241 Helianthus annuus HOM05D000034 ORTHO05D000037 2.0e-10 68.6 60 53.3
SHI22743 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-10 68.6 60 51.7
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.5e-10 67.4 54 55.6
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.5e-10 67.4 54 55.6
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 5.9e-10 67.0 62 53.2
SHI16593 Sapria himalayana HOM05D000034 ORTHO05D000037 7.7e-10 66.6 50 68.0
SHI35568 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-09 66.2 51 54.9
TAR049G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.3e-09 65.9 60 45.0
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.7e-09 65.5 60 50.0
CANSAT21G2255 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-09 65.1 57 54.4
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 2.2e-09 65.1 57 54.4
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-09 64.7 62 50.0
HanXRQChr12g0361021 Helianthus annuus HOM05D000034 ORTHO05D000037 2.9e-09 64.7 62 51.6
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.5e-09 63.2 62 50.0
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 8.5e-09 63.2 62 50.0
SHI02706 Sapria himalayana HOM05D000034 ORTHO05D000037 8.5e-09 63.2 60 48.3
SHI22494 Sapria himalayana HOM05D000034 ORTHO05D000037 8.5e-09 63.2 31 77.4
SHI33987 Sapria himalayana HOM05D000034 ORTHO05D000037 8.5e-09 63.2 60 46.7
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 62 46.8
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 62 46.8
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 62 46.8
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 62 46.8
SHI11570 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 62.4 60 46.7
SHI30049 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 62.4 31 77.4
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.9e-08 62.0 62 48.4
Oeu027419.1 Olea europaea HOM05D000034 ORTHO05D000037 1.9e-08 62.0 63 42.9
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 1.9e-08 62.0 62 46.8
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 1.9e-08 62.0 62 46.8
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 1.9e-08 62.0 62 46.8
Aqoxy7G01723 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.5e-08 61.6 62 45.2
PSO561G0039 Papaver somniferum HOM05D000034 ORTHO05D000037 2.5e-08 61.6 62 46.8
SHI29524 Sapria himalayana HOM05D000034 ORTHO05D000037 2.5e-08 61.6 38 68.4
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 3.2e-08 61.2 62 46.8
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 4.2e-08 60.8 62 45.2
MBI19_g18847_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 7.2e-08 60.1 62 43.5
PSO210G3506 Papaver somniferum HOM05D000034 ORTHO05D000037 7.2e-08 60.1 62 45.2
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 7.2e-08 60.1 60 46.7
PSO339G0656 Papaver somniferum HOM05D000034 ORTHO05D000037 9.4e-08 59.7 62 45.2
SHI08039 Sapria himalayana HOM05D000034 ORTHO05D000037 9.4e-08 59.7 50 54.0
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-07 59.3 58 51.7
MBI15_g22233_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.2e-07 59.3 62 41.9
Atru.chr2.1460 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-07 58.9 63 42.9
QL08p024725 Quercus lobata HOM05D000034 ORTHO05D000037 1.6e-07 58.9 50 52.0
PSO339G3400 Papaver somniferum HOM05D000034 ORTHO05D000037 2.1e-07 58.5 61 44.3
PSO384G0322 Papaver somniferum HOM05D000034 ORTHO05D000037 2.1e-07 58.5 61 44.3
MBI03_g24253_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-07 58.2 62 43.5
MBI05_g47471_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-07 58.2 53 50.9
PSO782G5697 Papaver somniferum HOM05D000034 ORTHO05D000037 2.7e-07 58.2 62 41.9
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 2.7e-07 58.2 49 53.1
SHI24204 Sapria himalayana HOM05D000034 ORTHO05D000037 2.7e-07 58.2 50 54.0
TAR331G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.7e-07 58.2 50 48.0
Oeu035951.1 Olea europaea HOM05D000034 ORTHO05D000037 3.6e-07 57.8 56 48.2
PSO210G2901 Papaver somniferum HOM05D000034 ORTHO05D000285 3.6e-07 57.8 62 45.2
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 4.6e-07 57.4 59 44.1
PSO017G3185 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 57.4 62 43.5
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 57.4 62 43.5
PSO339G1545 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 57.4 61 42.6
PSO384G0215 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 57.4 62 43.5
MBI01_g38804_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.1e-07 57.0 62 41.9
MBI17_g08356_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.1e-07 57.0 63 42.9
PSO210G7101 Papaver somniferum HOM05D000034 ORTHO05D000037 6.1e-07 57.0 62 41.9
SHI08553 Sapria himalayana HOM05D002880 ORTHO05D003450 6.1e-07 57.0 44 59.1
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 6.1e-07 57.0 65 44.6
SHI31185 Sapria himalayana HOM05D000034 ORTHO05D000037 7.9e-07 56.6 37 62.2
MBI15_g03056_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.0e-06 56.2 62 40.3
MBI16_g03088_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.0e-06 56.2 59 45.8
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.0e-06 56.2 62 43.5
MBI10_g03022_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.4e-06 55.8 62 43.5
Lj5P793T12 Lonicera japonica HOM05D000034 ORTHO05D000037 1.8e-06 55.5 63 39.7
MBI08_g29137_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.8e-06 55.5 62 38.7
MBI19_g47130_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.8e-06 55.5 63 41.3
Oeu059220.1 Olea europaea HOM05D000034 ORTHO05D000037 1.8e-06 55.5 58 44.8
Atru.chr2.3567 Acer truncatum HOM05D000034 ORTHO05D000037 2.3e-06 55.1 63 41.3
Atru.chr5.2050 Acer truncatum HOM05D000034 ORTHO05D000037 2.3e-06 55.1 63 41.3
Atru.chr1.1790 Acer truncatum HOM05D000034 ORTHO05D000037 3.0e-06 54.7 63 41.3
Atru.chr1.1798 Acer truncatum HOM05D000034 ORTHO05D000037 3.0e-06 54.7 63 41.3
Atru.chr11.1107 Acer truncatum HOM05D000034 ORTHO05D000037 3.0e-06 54.7 63 38.1
Aqoxy4G01816 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.0e-06 54.7 60 45.0
Lj8P314T20 Lonicera japonica HOM05D000034 ORTHO05D000037 3.0e-06 54.7 62 41.9
MBI03_g33486_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.0e-06 54.7 62 41.9
Atru.chr3.2504 Acer truncatum HOM05D000034 ORTHO05D000037 3.9e-06 54.3 63 41.3
MELO3C034964.2 Cucumis melo HOM05D000034 ORTHO05D000037 3.9e-06 54.3 54 48.1
MBI17_g21965_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.9e-06 54.3 62 40.3
QL01p050021 Quercus lobata HOM05D000034 ORTHO05D000037 3.9e-06 54.3 50 48.0
SHI29617 Sapria himalayana HOM05D004392 ORTHO05D004846 3.9e-06 54.3 30 80.0
TWI34G1515 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.9e-06 54.3 58 43.1
Atru.chr11.1101 Acer truncatum HOM05D000034 ORTHO05D000037 5.1e-06 53.9 63 38.1
Atru.chr11.923 Acer truncatum HOM05D000034 ORTHO05D000037 5.1e-06 53.9 63 39.7
arahy.Tifrunner.gnm1.ann1.1B19ZJ Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-06 53.9 62 45.2
MBI08_g00970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.1e-06 53.9 62 41.9
Oeu029510.1 Olea europaea HOM05D000034 ORTHO05D000037 5.1e-06 53.9 61 39.3
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-06 53.9 63 44.4
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-06 53.9 63 44.4
TPR.G25029 Trifolium pratense HOM05D000034 ORTHO05D000037 5.1e-06 53.9 61 41.0
TWI31G0756 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.1e-06 53.9 62 40.3
Atru.chr1.2138 Acer truncatum HOM05D000034 ORTHO05D000037 6.7e-06 53.5 63 41.3
Atru.chr13.1852 Acer truncatum HOM05D000034 ORTHO05D000037 6.7e-06 53.5 63 41.3
Atru.chr5.1943 Acer truncatum HOM05D000034 ORTHO05D000037 6.7e-06 53.5 60 41.7
AL5G20820 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 6.7e-06 53.5 61 41.0
Lj2P433T6 Lonicera japonica HOM05D000034 ORTHO05D000037 6.7e-06 53.5 63 41.3
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 6.7e-06 53.5 50 50.0
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 6.7e-06 53.5 50 50.0
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 6.7e-06 53.5 50 50.0
MBI12_g00584_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.7e-06 53.5 62 38.7
MBI14_g17384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.7e-06 53.5 62 41.9
PSO528G0094 Papaver somniferum HOM05D000034 ORTHO05D000037 6.7e-06 53.5 42 54.8
SHI01763 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-06 53.5 33 66.7
SHI15738 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-06 53.5 37 59.5
SHI29518 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-06 53.5 31 74.2
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.7e-06 53.5 58 43.1
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.7e-06 53.5 58 43.1
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.7e-06 53.5 58 43.1
MBI01_g11033_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 55 41.8
MBI01_g42393_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 62 38.7
MBI10_g22312_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 59 42.4
MBI17_g05526_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 62 40.3
MBI18_g01503_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 62 40.3
MBI18_g28052_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.8e-06 53.1 53 45.3
Oeu015819.1 Olea europaea HOM05D000034 ORTHO05D000037 8.8e-06 53.1 63 38.1
SHI27191 Sapria himalayana HOM05D000034 ORTHO05D000037 8.8e-06 53.1 58 41.4
TPR.G31340 Trifolium pratense HOM05D000034 ORTHO05D000037 8.8e-06 53.1 61 41.0
TPR.G35604 Trifolium pratense HOM05D000295 ORTHO05D000188 8.8e-06 53.1 61 41.0
TPR.G468 Trifolium pratense HOM05D000034 ORTHO05D000037 8.8e-06 53.1 60 41.7


User provided reference genes

Program Settings