Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09272 Sapria himalayana HOM05D005364 ORTHO05D006554 4.0e-61 238.0 130 100.0
Dinv41138 Davidia involucrata HOM05D005364 ORTHO05D006554 1.7e-08 63.2 47 61.7
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 1.7e-08 63.2 32 87.5
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 3.9e-08 62.0 32 84.4
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 8.7e-08 60.8 32 81.2
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 1.1e-07 60.5 32 81.2
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 1.1e-07 60.5 32 81.2
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 1.1e-07 60.5 33 75.8
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 1.9e-07 59.7 32 78.1
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 1.9e-07 59.7 32 75.0
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 3.3e-07 58.9 32 78.1
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 3.3e-07 58.9 32 78.1
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 3.3e-07 58.9 32 78.1
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 3.3e-07 58.9 32 78.1
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 4.3e-07 58.5 33 75.8
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 75.0
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 78.1
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 75.0
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 78.1
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 75.0
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 4.3e-07 58.5 32 78.1
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 5.6e-07 58.2 32 78.1
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 5.6e-07 58.2 32 78.1
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 5.6e-07 58.2 32 75.0
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 7.3e-07 57.8 32 75.0
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 7.3e-07 57.8 32 75.0
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 7.3e-07 57.8 32 75.0
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 7.3e-07 57.8 32 75.0
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 7.3e-07 57.8 32 78.1
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 9.6e-07 57.4 32 75.0
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 9.6e-07 57.4 32 75.0
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 9.6e-07 57.4 32 75.0
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 1.3e-06 57.0 33 78.8
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 1.6e-06 56.6 32 75.0
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 1.6e-06 56.6 32 75.0
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 1.6e-06 56.6 32 75.0
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.1e-06 56.2 32 75.0
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 2.1e-06 56.2 33 72.7
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 2.1e-06 56.2 32 75.0
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 2.1e-06 56.2 32 75.0
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 2.1e-06 56.2 32 75.0
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 2.8e-06 55.8 29 86.2
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 2.8e-06 55.8 32 71.9
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 2.8e-06 55.8 32 71.9
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 3.6e-06 55.5 32 68.8
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 3.6e-06 55.5 32 71.9
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 3.6e-06 55.5 32 71.9
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 3.6e-06 55.5 32 75.0
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 4.8e-06 55.1 32 71.9
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 4.8e-06 55.1 32 68.8
VMungo0647G2252 Vigna mungo HOM05D005364 ORTHO05D006554 4.8e-06 55.1 32 71.9
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 6.2e-06 54.7 32 65.6
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 6.2e-06 54.7 32 68.8
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 6.2e-06 54.7 32 71.9
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 8.1e-06 54.3 33 69.7
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 71.9
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 8.1e-06 54.3 31 74.2
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 8.1e-06 54.3 32 78.1


User provided reference genes

Program Settings