Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 1.0e-73 280.0 149 100.0
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 6.2e-42 174.5 131 71.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 2.3e-41 172.6 129 72.1
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 6.8e-41 171.0 131 71.0
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 6.8e-41 171.0 131 69.5
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 2.0e-40 169.5 131 69.5
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 5.8e-40 167.9 131 68.7
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 5.8e-40 167.9 131 69.5
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.2e-39 166.0 131 71.0
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.9e-39 165.6 131 68.7
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 2.9e-39 165.6 131 67.9
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 3.7e-39 165.2 131 66.4
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 4.9e-39 164.9 131 66.4
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.9e-39 164.9 131 66.4
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 4.9e-39 164.9 131 66.4
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 4.9e-39 164.9 131 67.2
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 6.4e-39 164.5 131 67.9
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 8.3e-39 164.1 131 68.7
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 8.3e-39 164.1 131 68.7
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.1e-38 163.7 131 66.4
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.1e-38 163.7 131 69.5
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 1.4e-38 163.3 131 68.7
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 1.4e-38 163.3 131 65.6
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.4e-38 163.3 131 65.6
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.4e-38 163.3 131 65.6
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.4e-38 162.5 131 68.7
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 4.1e-38 161.8 131 65.6
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 4.1e-38 161.8 131 67.2
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 4.1e-38 161.8 131 67.2
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 4.1e-38 161.8 131 65.6
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 5.4e-38 161.4 131 65.6
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 5.4e-38 161.4 140 64.3
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 5.4e-38 161.4 131 65.6
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.1e-38 161.0 131 66.4
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 9.2e-38 160.6 145 63.4
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 9.2e-38 160.6 131 67.2
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 1.2e-37 160.2 131 64.9
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 1.6e-37 159.8 131 65.6
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.6e-37 159.8 131 67.2
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 2.1e-37 159.5 131 64.9
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 2.7e-37 159.1 131 66.4
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 2.7e-37 159.1 131 64.1
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.5e-37 158.7 131 65.6
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 4.6e-37 158.3 131 65.6
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 4.6e-37 158.3 131 65.6
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 4.6e-37 158.3 131 64.1
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 6.0e-37 157.9 131 64.9
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 7.8e-37 157.5 131 65.6
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 7.8e-37 157.5 131 63.4
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 1.0e-36 157.1 131 66.4
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.7e-36 156.4 131 63.4
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.7e-36 156.4 131 64.1
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 2.3e-36 156.0 142 63.4
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 2.3e-36 156.0 131 64.9
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 3.0e-36 155.6 138 63.0
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 3.9e-36 155.2 130 64.6
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 5.1e-36 154.8 131 61.8
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 5.1e-36 154.8 131 64.1
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 6.6e-36 154.5 131 62.6
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 6.6e-36 154.5 131 64.1
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 8.6e-36 154.1 131 63.4
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.1e-35 153.7 131 65.6
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.5e-35 153.3 131 65.6
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.5e-35 153.3 131 64.1
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 1.9e-35 152.9 131 61.8
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 1.9e-35 152.9 131 64.1
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 1.9e-35 152.9 132 63.6
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 2.5e-35 152.5 131 62.6
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 7.3e-35 151.0 131 61.8
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 7.3e-35 151.0 131 64.9
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 9.5e-35 150.6 131 61.8
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 9.5e-35 150.6 143 60.8
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.2e-34 150.2 131 62.6
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 1.6e-34 149.8 126 65.1
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 1.6e-34 149.8 131 63.4
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 3.6e-34 148.7 131 63.4
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 3.6e-34 148.7 127 65.4
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 3.6e-34 148.7 131 61.8
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 4.7e-34 148.3 131 61.8
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 6.2e-34 147.9 131 63.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 5.2e-33 144.8 131 61.1
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 6.8e-33 144.4 128 64.1
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 8.9e-33 144.1 131 61.8
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.2e-32 143.7 131 61.1
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.2e-32 143.7 131 60.3
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.2e-32 143.7 132 62.1
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.5e-32 143.3 131 61.1
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.5e-32 143.3 131 61.1
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 2.0e-32 142.9 131 61.1
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 2.0e-32 142.9 123 63.4
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 2.6e-32 142.5 131 61.1
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.6e-32 142.5 124 62.9
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 4.4e-32 141.7 131 60.3
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 5.8e-32 141.4 181 48.1
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 9.9e-32 140.6 131 60.3
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 1.7e-31 139.8 132 61.4
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 3.8e-31 138.7 128 60.9
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 3.8e-31 138.7 126 61.9
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 3.8e-31 138.7 126 61.9
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 3.8e-31 138.7 126 61.9
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 8.4e-31 137.5 130 58.5
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.1e-30 137.1 152 55.9
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 1.4e-30 136.7 126 61.1
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 1.4e-30 136.7 126 61.1
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.4e-30 136.0 131 56.5
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 1.6e-29 133.3 131 57.3
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 3.5e-29 132.1 134 54.5
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.3e-28 130.2 127 58.3
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 5.1e-28 128.3 106 67.0
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.1e-27 127.1 121 57.9
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 5.6e-27 124.8 115 59.1
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.7e-26 121.7 102 63.7
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 5.2e-25 118.2 102 64.7
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.9e-25 117.9 105 63.8
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 2.9e-23 112.5 112 56.2
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 1.1e-22 110.5 108 60.2
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.1e-21 106.3 127 52.8
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 5.1e-20 101.7 81 67.9
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 3.3e-19 99.0 62 72.6
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.3e-15 87.0 80 62.5
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.8e-09 66.6 58 63.8
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.2e-08 63.9 69 58.0
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 1.5e-08 63.5 51 62.7
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 2.6e-08 62.8 52 67.3
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.8e-08 61.6 57 57.9
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 8.4e-07 57.8 36 72.2


User provided reference genes

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