Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09187 Sapria himalayana HOM05D001090 ORTHO05D008663 7.5e-192 673.7 343 100.0
Potri.019G066500 Populus trichocarpa HOM05D001090 ORTHO05D008663 5.9e-96 355.1 314 60.8
Cfa018121 Carpinus fangiana HOM05D001090 ORTHO05D008663 4.7e-93 345.5 313 58.8
Sabra19G0078400 Salix brachista HOM05D001090 ORTHO05D008663 1.0e-92 344.4 314 59.9
QL09p032725 Quercus lobata HOM05D001090 ORTHO05D008663 1.7e-90 337.0 313 57.8
TWI34G0871 Tripterygium wilfordii HOM05D001090 ORTHO05D008663 6.3e-90 335.1 313 57.2
CiPaw.15G032400 Carya illinoinensis HOM05D001090 ORTHO05D008663 1.1e-89 334.3 312 57.7
COL.COLO4_05689 Corchorus olitorius HOM05D001090 ORTHO05D008663 4.1e-89 332.4 313 56.5
Ciclev10000294m.g Citrus clementina HOM05D001090 ORTHO05D008663 5.3e-89 332.0 313 57.2
Thecc.08G132300 Theobroma cacao HOM05D001090 ORTHO05D008663 1.5e-88 330.5 313 56.2
RcHm_v2.0_Chr6g0296591 Rosa chinensis HOM05D001090 ORTHO05D008663 1.7e-87 327.0 321 54.8
FvH4_2g27740 Fragaria vesca HOM05D001090 ORTHO05D008663 2.9e-87 326.2 321 55.1
Manes.18G082000 Manihot esculenta HOM05D001090 ORTHO05D008663 6.5e-87 325.1 313 57.2
Dinv14668 Davidia involucrata HOM05D001090 ORTHO05D008663 1.1e-86 324.3 312 55.1
FAN24G1236 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.1e-86 324.3 317 56.2
GSVIVG01008814001 Vitis vinifera HOM05D001090 ORTHO05D008663 4.2e-86 322.4 310 57.1
Duzib041G0130 Durio zibethinus HOM05D001090 ORTHO05D008663 2.1e-85 320.1 311 56.3
FAN15G0022 Fragaria x ananassa HOM05D001090 ORTHO05D002687 3.6e-85 319.3 321 54.8
FAN20G0562 Fragaria x ananassa HOM05D001090 ORTHO05D002687 3.6e-85 319.3 317 55.5
CSS0021561 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 6.1e-85 318.5 313 55.0
FAN27G1391 Fragaria x ananassa HOM05D001090 ORTHO05D002687 6.1e-85 318.5 317 55.5
Actinidia29485 Actinidia chinensis HOM05D001090 ORTHO05D008663 8.0e-85 318.2 313 55.0
Gorai.005G088100 Gossypium raimondii HOM05D001090 ORTHO05D008663 2.3e-84 316.6 310 56.1
Atru.chr13.1551 Acer truncatum HOM05D001090 ORTHO05D008663 3.0e-84 316.2 313 54.0
TWI32G0149 Tripterygium wilfordii HOM05D001090 ORTHO05D002687 8.8e-84 314.7 310 54.5
Medtr3g088545 Medicago truncatula HOM05D001090 ORTHO05D008663 1.3e-82 310.8 312 54.5
Actinidia03422 Actinidia chinensis HOM05D001090 ORTHO05D008663 1.7e-82 310.5 313 54.6
Nn1g08979 Nelumbo nucifera HOM05D001090 ORTHO05D008663 3.7e-82 309.3 312 53.5
CANSAT56G3793 Cannabis sativa HOM05D001090 ORTHO05D008663 8.2e-82 308.1 313 52.4
Prupe.1G490500 Prunus persica HOM05D001090 ORTHO05D008663 8.2e-82 308.1 309 55.0
Rhsim11G0070600 Rhododendron simsii HOM05D001090 ORTHO05D008663 2.4e-81 306.6 306 55.2
Aqoxy6G00325 Aquilegia oxysepala HOM05D001090 ORTHO05D008663 3.1e-81 306.2 312 53.5
Glyma.06G116800 Glycine max HOM05D001090 ORTHO05D008663 5.3e-81 305.4 311 53.1
Lj1g0016545 Lotus japonicus HOM05D001090 ORTHO05D008663 1.2e-80 304.3 312 52.9
TPR.G13463 Trifolium pratense HOM05D001090 ORTHO05D008663 1.2e-80 304.3 312 53.8
PSO017G6856 Papaver somniferum HOM05D001090 ORTHO05D008663 1.6e-80 303.9 313 53.7
THA.LOC104813679 Tarenaya hassleriana HOM05D001090 ORTHO05D008663 1.3e-79 300.8 313 53.4
Hma1.2p1_1129F.1_g259860 Hydrangea macrophylla HOM05D001090 ORTHO05D008663 1.7e-79 300.4 313 51.8
VMungo1309G2387 Vigna mungo HOM05D001090 ORTHO05D008663 5.0e-79 298.9 312 51.6
C05p20620 Brassica napus HOM05D001090 ORTHO05D008663 8.5e-79 298.1 310 52.9
BolC5t30760H Brassica oleracea HOM05D001090 ORTHO05D008663 8.5e-79 298.1 310 52.9
BcaC05g26082 Brassica carinata HOM05D001090 ORTHO05D008663 1.5e-78 297.4 314 51.6
EL10Ac7g17319 Beta vulgaris HOM05D001090 ORTHO05D008663 3.2e-78 296.2 310 53.2
Lalb_Chr08g0241151 Lupinus albus HOM05D001090 ORTHO05D008663 9.4e-78 294.7 313 53.0
Sc15g0007530 Simmondsia chinensis HOM05D001090 ORTHO05D008663 2.1e-77 293.5 310 52.3
DCAR_018875 Daucus carota HOM05D001090 ORTHO05D008663 3.6e-77 292.7 310 46.1
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 3.6e-77 292.7 310 51.0
AT1G21651 Arabidopsis thaliana HOM05D001090 ORTHO05D008663 4.7e-77 292.4 313 50.2
A06p17720 Brassica napus HOM05D001090 ORTHO05D008663 6.1e-77 292.0 310 51.9
BraA06t24864Z Brassica rapa HOM05D001090 ORTHO05D008663 6.1e-77 292.0 310 51.9
BcaB07g32158 Brassica carinata HOM05D001090 ORTHO05D008663 1.4e-76 290.8 313 50.8
Carub.0001s2108 Capsella rubella HOM05D001090 ORTHO05D008663 1.8e-76 290.4 313 49.8
AL1G34800 Arabidopsis lyrata HOM05D001090 ORTHO05D008663 3.0e-76 289.7 313 49.8
Thhalv10006535m.g Eutrema salsugineum HOM05D001090 ORTHO05D002687 4.0e-76 289.3 310 50.6
AT1G21650 Arabidopsis thaliana HOM05D001090 ORTHO05D002687 5.2e-76 288.9 310 50.3
Aa31LG7G5630 Aethionema arabicum HOM05D001090 ORTHO05D008663 6.8e-76 288.5 313 51.1
Phvul.009G129300 Phaseolus vulgaris HOM05D001090 ORTHO05D008663 6.8e-76 288.5 312 51.9
CARHR022000 Cardamine hirsuta HOM05D001090 ORTHO05D002687 1.2e-75 287.7 310 50.3
PGSC0003DMG401006052 Solanum tuberosum HOM05D001090 ORTHO05D008663 1.5e-75 287.3 312 52.9
Psat5g085040 Pisum sativum HOM05D001090 ORTHO05D008663 2.0e-75 287.0 312 51.9
CsaV3_1G032930 Cucumis sativus L. HOM05D001090 ORTHO05D008663 5.7e-75 285.4 312 51.3
Hund17320 Selenicereus undatus HOM05D001090 ORTHO05D008663 7.5e-75 285.0 310 50.6
Solyc11g005030.3 Solanum lycopersicum HOM05D001090 ORTHO05D008663 1.7e-74 283.9 313 52.1
arahy.Tifrunner.gnm1.ann1.FIZF7Q Arachis hypogaea HOM05D001090 ORTHO05D008663 2.8e-74 283.1 312 51.3
Gohir.D02G078900 Gossypium hirsutum HOM05D001090 ORTHO05D008663 3.7e-74 282.7 242 62.4
Peaxi162Scf01003g00015 Petunia axillaris HOM05D001090 ORTHO05D008663 4.8e-74 282.3 320 46.6
arahy.Tifrunner.gnm1.ann1.NR7S6L Arachis hypogaea HOM05D001090 ORTHO05D008663 6.3e-74 282.0 312 50.6
Sopen11g001050 Solanum pennellii HOM05D001090 ORTHO05D008663 1.1e-73 281.2 312 51.9
MELO3C002690.2 Cucumis melo HOM05D001090 ORTHO05D008663 1.4e-73 280.8 308 51.9
vmacro16445 Vaccinium macrocarpon HOM05D001090 ORTHO05D008663 1.6e-72 277.3 425 41.9
Gohir.A02G071600 Gossypium hirsutum HOM05D001090 ORTHO05D008663 7.7e-72 275.0 242 61.2
Lj7C349G17 Lonicera japonica HOM05D001090 ORTHO05D002687 1.0e-71 274.6 310 51.9
CDE02G2378 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 1.7e-71 273.9 312 49.0
Sp1g19180 Schrenkiella parvula HOM05D001090 ORTHO05D008663 3.8e-71 272.7 314 47.1
AUR62040524 Chenopodium quinoa HOM05D001090 ORTHO05D008663 6.1e-69 265.4 279 51.6
MSTRG.25363 Avicennia marina HOM05D001090 ORTHO05D008663 6.8e-68 261.9 312 48.7
ECA238G2411 Erigeron canadensis HOM05D001090 ORTHO05D008663 1.2e-67 261.2 313 48.9
Nitab4.5_0002045g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 1.2e-67 261.2 293 45.7
SalBow7G3344 Salvia bowleyana HOM05D001090 ORTHO05D008663 1.5e-67 260.8 313 46.6
SalBow7G3826 Salvia bowleyana HOM05D001090 ORTHO05D008663 7.5e-67 258.5 313 46.3
Ah.15g092020 Amaranthus hybridus HOM05D001090 ORTHO05D008663 4.1e-65 252.7 269 52.8
ATR0584G005 Amborella trichopoda HOM05D001090 ORTHO05D008663 7.7e-64 248.4 311 46.9
Cc10_g12630 Coffea canephora HOM05D001090 ORTHO05D008663 5.0e-63 245.7 318 42.1
Ca_16604_v3 Cicer arietinum L. HOM05D001090 ORTHO05D002687 6.6e-63 245.4 256 53.1
Lsat_1_v5_gn_1_9840 Lactuca sativa HOM05D001090 ORTHO05D008663 1.5e-62 244.2 312 45.5
HanXRQChr02g0041931 Helianthus annuus HOM05D001090 ORTHO05D008663 9.5e-62 241.5 316 45.9
Migut.C01061 Erythranthe guttata HOM05D001090 ORTHO05D008663 1.2e-59 234.6 313 40.6
PSO170G6226 Papaver somniferum HOM05D001090 ORTHO05D008663 5.7e-59 232.3 313 46.6
Nitab4.5_0001168g0020 Nicotiana tabacum HOM05D001090 ORTHO05D008663 3.2e-57 226.5 314 40.1
Oeu021884.2 Olea europaea HOM05D001090 ORTHO05D008663 1.2e-56 224.6 361 36.0
Lj7A347T47 Lonicera japonica HOM05D001090 ORTHO05D008663 1.6e-56 224.2 203 60.6
HPP92_013748 Vanilla planifolia HOM05D001090 ORTHO05D008663 1.7e-55 220.7 303 44.6
Cpa.g.sc64.146 Carica papaya HOM05D001090 ORTHO05D008663 1.1e-54 218.0 312 36.9
unitig_0.g2283 Utricularia gibba HOM05D001090 ORTHO05D008663 5.8e-51 205.7 309 37.5
Sed0003425 Sechium edule HOM05D001090 ORTHO05D008663 2.4e-49 200.3 202 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1353 Anthoceros agrestis HOM05D001090 ORTHO05D008663 1.3e-39 167.9 320 34.7
SGA_v2.0_scaffold24G10429 Striga asiatica HOM05D001090 ORTHO05D008663 6.4e-34 149.1 255 33.3
Dinv40410 Davidia involucrata HOM05D001090 ORTHO05D008663 1.9e-33 147.5 99 62.6
Zm00001eb337940 Zea mays HOM05D001090 ORTHO05D008663 1.2e-32 144.8 124 52.4
Pp3c14_11620 Physcomitrium patens HOM05D001090 ORTHO05D008663 1.7e-31 141.0 234 40.2
Os05g0422300 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D008663 5.1e-31 139.4 124 50.8
SMO011G0047 Selaginella moellendorffii HOM05D001090 ORTHO05D008663 8.9e-28 128.6 249 36.9
SEGI_33865 Sequoiadendron giganteum HOM05D001090 ORTHO05D008663 7.6e-27 125.6 131 46.6
Eucgr.F03832 Eucalyptus grandis HOM05D001090 ORTHO05D008663 3.5e-24 116.7 203 33.5
Mapoly0020s0076 Marchantia polymorpha HOM05D001090 ORTHO05D008663 1.1e-22 111.7 164 37.8
CSS0004473 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 5.4e-17 92.8 166 34.9
CSS0019679 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 2.7e-16 90.5 166 34.9
CDE08G1173 Ceratophyllum demersum HOM05D001090 ORTHO05D008663 3.1e-12 77.0 140 33.6
HanXRQChr10g0316851 Helianthus annuus HOM05D000066 ORTHO05D009093 1.2e-08 65.1 80 36.2
CiPaw.05G145700 Carya illinoinensis HOM05D000453 ORTHO05D000387 3.5e-08 63.5 160 30.0
Manes.05G092700 Manihot esculenta HOM05D000453 ORTHO05D000387 2.3e-07 60.8 157 27.4
TWI18G0044 Tripterygium wilfordii HOM05D000453 ORTHO05D000387 3.0e-07 60.5 162 30.2
TAR371G0360 Trochodendron aralioides HOM05D000453 ORTHO05D000387 3.0e-07 60.5 161 28.6
CSS0043152 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 1.5e-06 58.2 76 40.8
CSS0030841 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D008663 4.3e-06 56.6 84 35.7


User provided reference genes

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