Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 2.9e-91 338.6 175 100.0
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 2.7e-28 129.4 158 46.2
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 5.2e-24 115.2 172 40.7
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 8.9e-24 114.4 167 41.3
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.2e-23 114.0 172 40.1
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 5.8e-23 111.7 162 41.4
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.2e-20 104.0 149 39.6
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 6.0e-20 101.7 162 37.0
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 1.3e-19 100.5 155 38.1
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 6.6e-19 98.2 162 37.7
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 8.6e-19 97.8 151 39.1
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.9e-18 96.7 174 37.9
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 1.2e-17 94.0 158 38.6
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 2.1e-17 93.2 161 35.4
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 6.2e-17 91.7 161 38.5
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 8.1e-17 91.3 158 37.3
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.1e-16 90.9 163 34.4
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 6.8e-16 88.2 158 36.1
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.2e-15 87.4 182 35.2
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 2.0e-15 86.7 149 32.9
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 5.8e-15 85.1 132 38.6
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 1.7e-14 83.6 146 37.7
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 2.9e-14 82.8 146 37.0
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 3.7e-14 82.4 162 35.2
Ciclev10002638m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.7e-14 82.4 168 32.1
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.9e-14 82.0 169 32.0
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 3.2e-13 79.3 173 32.4
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 7.1e-13 78.2 149 36.2
Cpa.g.sc49.92 Carica papaya HOM05D007679 ORTHO05D009560 2.1e-12 76.6 166 32.5
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 157 31.8
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 1.0e-11 74.3 164 34.1
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-11 73.9 155 32.3
Gorai.009G256200 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.7e-11 73.6 160 31.2
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 1.7e-11 73.6 122 37.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 6.6e-11 71.6 164 34.1
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 6.6e-11 71.6 164 34.1
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 8.6e-11 71.2 129 38.8
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 8.6e-11 71.2 131 35.9
Cpa.g.sc49.91 Carica papaya HOM05D007679 ORTHO05D009560 8.6e-11 71.2 149 32.9
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 7.3e-10 68.2 149 32.2
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 7.3e-10 68.2 156 30.8
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 9.6e-10 67.8 127 30.7
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 1.2e-09 67.4 149 30.9
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-09 67.4 160 30.0
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-09 67.4 160 30.0
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 1.6e-09 67.0 161 28.6
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-09 66.6 156 29.5
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 3.6e-09 65.9 162 32.1
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 3.6e-09 65.9 156 28.8
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 4.7e-09 65.5 158 27.8
Ciclev10003802m.g Citrus clementina HOM05D004894 ORTHO05D005689 6.2e-09 65.1 171 32.7
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 8.1e-09 64.7 126 31.7
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 8.1e-09 64.7 151 33.1
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 8.1e-09 64.7 159 28.9
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-08 64.3 134 32.8
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 1.1e-08 64.3 134 32.8
COL.COLO4_34260 Corchorus olitorius HOM05D007679 ORTHO05D009560 1.8e-08 63.5 149 29.5
Potri.013G012800 Populus trichocarpa HOM05D010921 ORTHO05D013092 1.8e-08 63.5 157 31.8
Atru.chr13.2013 Acer truncatum HOM05D004894 ORTHO05D005689 2.4e-08 63.2 181 29.3
Duzib041G0061 Durio zibethinus HOM05D007679 ORTHO05D009560 2.4e-08 63.2 148 28.4
Thecc.08G157300 Theobroma cacao HOM05D007679 ORTHO05D009560 3.1e-08 62.8 174 27.0
SHI09077 Sapria himalayana HOM05D010921 ORTHO05D013092 4.0e-08 62.4 150 30.0
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 5.2e-08 62.0 134 32.8
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 6.8e-08 61.6 134 32.8
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 8.9e-08 61.2 151 31.8
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-07 60.8 129 28.7
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-07 60.8 137 26.3
Oeu061438.1 Olea europaea HOM05D011489 ORTHO05D014472 1.2e-07 60.8 159 28.9
Ciclev10003694m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.5e-07 60.5 156 27.6
ECA233G5340 Erigeron canadensis HOM05D020282 ORTHO05D010160 1.5e-07 60.5 144 27.8
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-07 60.5 158 32.9
Oeu046059.1 Olea europaea HOM05D011489 ORTHO05D014472 1.5e-07 60.5 168 28.0
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 1.5e-07 60.5 135 30.4
FAN20G3174 Fragaria x ananassa HOM05D004894 ORTHO05D005689 2.0e-07 60.1 158 29.7
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 2.0e-07 60.1 130 30.0
Duzib093G1264 Durio zibethinus HOM05D007679 ORTHO05D009560 2.6e-07 59.7 137 29.9
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.6e-07 59.7 160 28.1
Potri.001G073350 Populus trichocarpa HOM05D010921 ORTHO05D013092 2.6e-07 59.7 169 27.2
Duzib041G0498 Durio zibethinus HOM05D007679 ORTHO05D009560 5.8e-07 58.5 172 28.5
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.3e-06 57.4 133 33.1
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-06 57.4 153 30.7
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.3e-06 57.4 160 29.4
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.7e-06 57.0 131 24.4
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.7e-06 57.0 132 26.5
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 1.7e-06 57.0 132 26.5
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.7e-06 57.0 124 30.6
Potri.013G013300 Populus trichocarpa HOM05D004894 ORTHO05D005689 2.2e-06 56.6 66 45.5
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 2.9e-06 56.2 132 26.5
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.9e-06 56.2 134 26.9
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 3.8e-06 55.8 149 27.5
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 4.9e-06 55.5 157 27.4
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 4.9e-06 55.5 149 28.2
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 4.9e-06 55.5 120 30.0
MSTRG.1100 Avicennia marina HOM05D011489 ORTHO05D014472 6.4e-06 55.1 180 27.8
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 6.4e-06 55.1 173 25.4
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 6.4e-06 55.1 173 25.4
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 6.4e-06 55.1 173 25.4
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 6.4e-06 55.1 143 25.9
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 6.4e-06 55.1 142 28.9
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 6.4e-06 55.1 144 31.9
Lsat_1_v5_gn_9_41980 Lactuca sativa HOM05D020282 ORTHO05D048351 6.4e-06 55.1 161 23.0
Potri.013G012733 Populus trichocarpa HOM05D010921 ORTHO05D013092 6.4e-06 55.1 154 31.2
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.4e-06 55.1 131 26.0
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 6.4e-06 55.1 153 26.8
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 8.4e-06 54.7 121 31.4
Gorai.009G257700 Gossypium raimondii HOM05D007679 ORTHO05D009560 8.4e-06 54.7 150 28.0
Gorai.009G264900 Gossypium raimondii HOM05D007679 ORTHO05D009560 8.4e-06 54.7 150 25.3
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-06 54.7 129 31.8
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-06 54.7 91 34.1


User provided reference genes

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