Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 0.0e+00 1422.9 706 100.0
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.8e-107 394.4 744 38.2
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.7e-103 380.6 745 38.1
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.5e-93 348.2 731 36.1
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 3.6e-92 343.6 689 37.9
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 8.1e-92 342.4 774 35.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.8e-91 341.3 755 35.1
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.0e-91 340.1 751 36.0
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.2e-90 338.6 757 34.6
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.0e-90 337.8 731 36.0
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 1.4e-88 331.6 741 34.3
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.4e-88 330.9 754 36.2
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.4e-88 330.9 731 33.9
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.0e-86 325.5 742 34.4
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 3.0e-86 323.9 749 34.2
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 9.6e-85 318.9 749 34.2
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 4.8e-84 316.6 753 33.7
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 1.8e-83 314.7 734 35.1
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.2e-82 312.0 766 33.6
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 4.5e-82 310.1 743 32.7
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.3e-81 308.5 744 33.9
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.9e-81 307.4 770 33.2
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 3.2e-80 303.9 739 34.2
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 7.1e-80 302.8 754 33.4
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.1e-79 301.2 744 33.3
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.7e-79 300.8 751 33.2
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.3e-78 298.5 708 32.9
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.3e-78 297.7 738 34.6
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 3.0e-78 297.4 758 33.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 3.3e-77 293.9 747 32.3
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 5.6e-77 293.1 782 33.1
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 4.8e-76 290.0 753 33.7
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.1e-75 288.9 753 33.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.8e-75 288.1 715 32.2
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 9.0e-75 285.8 734 32.8
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 2.0e-74 284.6 754 33.2
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.3e-73 282.0 752 31.5
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.3e-73 282.0 712 32.3
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.5e-73 279.6 758 33.0
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 6.5e-73 279.6 731 33.1
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.9e-72 278.1 742 32.9
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.9e-72 278.1 709 31.5
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 9.3e-72 275.8 757 30.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 7.9e-71 272.7 765 31.6
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.1e-69 268.9 755 30.1
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.5e-69 268.5 822 29.9
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.9e-69 268.1 751 31.4
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 3.3e-69 267.3 627 33.5
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.8e-68 264.2 749 31.2
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 8.2e-68 262.7 758 29.4
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.1e-67 262.3 622 35.4
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.4e-67 261.9 699 32.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 9.0e-67 259.2 711 30.9
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.5e-66 258.5 751 30.2
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 5.9e-66 256.5 593 33.4
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 5.9e-66 256.5 699 31.8
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 1.3e-65 255.4 708 31.9
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.7e-65 255.0 707 32.0
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 5.5e-64 250.0 616 34.4
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 9.3e-64 249.2 695 32.1
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.1e-63 246.5 553 35.3
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.8e-62 245.0 564 33.5
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 3.9e-62 243.8 550 33.6
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 7.4e-61 239.6 746 29.9
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 9.7e-61 239.2 622 33.3
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.4e-59 234.6 707 30.7
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 2.6e-58 231.1 747 28.8
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 5.0e-57 226.9 719 28.2
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.9e-56 224.9 762 30.3
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 7.2e-56 223.0 593 32.0
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.2e-55 222.2 776 30.5
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.2e-55 222.2 595 30.4
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 8.8e-54 216.1 625 32.5
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 5.7e-53 213.4 749 30.2
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 3.7e-52 210.7 624 32.1
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.1e-51 209.1 636 31.8
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 5.3e-51 206.8 628 32.5
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.2e-50 205.7 403 37.5
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.1e-43 182.6 447 33.1
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.4e-43 182.2 562 29.0
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.2e-42 179.1 735 26.1
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 2.9e-41 174.5 732 26.6
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 3.8e-41 174.1 512 30.7
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.2e-40 171.0 294 37.1
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.1e-37 162.5 393 32.3
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 4.1e-35 154.1 395 29.1
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 5.9e-34 150.2 384 33.3
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.5e-32 143.7 250 36.0
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 3.6e-31 141.0 298 33.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 4.7e-31 140.6 441 27.9
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 4.7e-31 140.6 300 34.3
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.0e-30 137.5 335 34.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.5e-29 135.6 399 31.3
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.0e-29 135.2 318 30.8
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 3.4e-29 134.4 228 39.0
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.1e-27 127.9 292 31.8
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.8e-25 120.9 396 29.5
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.2e-23 115.9 248 33.9
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 4.7e-23 114.0 223 35.9
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.0e-22 112.8 297 33.7
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.0e-22 110.9 256 33.6
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 8.8e-22 109.8 258 34.5
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 7.5e-21 106.7 196 41.8
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.9e-20 104.0 229 33.6
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.2e-18 99.4 327 26.0
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.9e-18 97.1 243 30.9
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 4.0e-14 84.3 347 26.2
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.0e-13 82.0 219 31.5
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.4e-11 75.9 129 40.3
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.2e-11 74.7 195 31.3
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.6e-07 62.4 99 38.4


User provided reference genes

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