Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09001 Sapria himalayana HOM05D004490 ORTHO05D005353 2.7e-146 521.9 260 100.0
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 2.2e-18 97.1 73 64.4
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.9e-18 96.7 78 61.5
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.9e-18 96.7 78 61.5
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 2.9e-18 96.7 97 51.5
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 3.7e-18 96.3 97 52.6
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 8.3e-18 95.1 73 64.4
SHI14959 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-17 94.4 81 61.7
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.8e-17 94.0 64 73.4
Nitab4.5_0018466g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 3.2e-17 93.2 73 64.4
SHI06139 Sapria himalayana HOM05D000515 ORTHO05D003188 3.2e-17 93.2 70 67.1
SHI10238 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-17 92.8 81 60.5
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 7.0e-17 92.0 61 72.1
SHI07150 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-17 92.0 85 60.0
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 9.2e-17 91.7 73 63.0
CiPaw.15G081800 Carya illinoinensis HOM05D004490 ORTHO05D005353 1.2e-16 91.3 73 61.6
SHI01144 Sapria himalayana HOM05D000023 ORTHO05D002750 1.2e-16 91.3 70 62.9
SHI21431 Sapria himalayana HOM05D005437 ORTHO05D002750 1.2e-16 91.3 81 61.7
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 2.0e-16 90.5 61 72.1
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 2.0e-16 90.5 73 63.0
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 2.0e-16 90.5 73 63.0
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 2.7e-16 90.1 60 68.3
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 3.5e-16 89.7 60 68.3
SHI07784 Sapria himalayana HOM05D000023 ORTHO05D002750 3.5e-16 89.7 81 61.7
SHI47314 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-16 89.7 81 59.3
SHI47801 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-16 89.7 81 59.3
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 3.5e-16 89.7 61 68.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.6e-16 89.4 62 64.5
SHI16920 Sapria himalayana HOM05D003924 ORTHO05D002750 4.6e-16 89.4 81 60.5
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 4.6e-16 89.4 62 64.5
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 6.0e-16 89.0 61 70.5
SHI23518 Sapria himalayana HOM05D000023 ORTHO05D002750 6.0e-16 89.0 81 58.0
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 6.0e-16 89.0 64 70.3
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 7.8e-16 88.6 81 55.6
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 7.8e-16 88.6 77 55.8
GSVIVG01032025001 Vitis vinifera HOM05D000073 ORTHO05D000033 7.8e-16 88.6 94 53.2
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 1.3e-15 87.8 92 54.3
SHI28174 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-15 87.8 81 59.3
GSVIVG01021057001 Vitis vinifera HOM05D000628 ORTHO05D001866 1.3e-15 87.8 81 58.0
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 1.7e-15 87.4 61 68.9
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 1.7e-15 87.4 78 57.7
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 1.7e-15 87.4 61 70.5
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 1.7e-15 87.4 81 58.0
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 2.3e-15 87.0 86 52.3
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 2.3e-15 87.0 93 53.8
SHI13211 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-15 86.7 70 62.9
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 3.9e-15 86.3 73 64.4
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 3.9e-15 86.3 60 66.7
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 3.9e-15 86.3 66 66.7
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 3.9e-15 86.3 61 70.5
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 3.9e-15 86.3 61 68.9
SHI09417 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-15 86.3 165 37.0
SHI14664 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-15 86.3 81 58.0
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 5.0e-15 85.9 61 63.9
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 5.0e-15 85.9 61 67.2
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 5.0e-15 85.9 61 68.9
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 5.0e-15 85.9 65 66.2
SHI03240 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-15 85.9 81 58.0
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 5.0e-15 85.9 67 61.2
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 6.6e-15 85.5 61 67.2
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 6.6e-15 85.5 65 66.2
SHI01741 Sapria himalayana HOM05D000499 ORTHO05D002036 6.6e-15 85.5 83 57.8
SHI16364 Sapria himalayana HOM05D000023 ORTHO05D002750 6.6e-15 85.5 81 55.6
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 8.6e-15 85.1 73 63.0
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 8.6e-15 85.1 72 61.1
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 8.6e-15 85.1 67 61.2
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 8.6e-15 85.1 67 61.2
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 8.6e-15 85.1 83 53.0
Cpa.g.sc66.45 Carica papaya HOM05D004490 ORTHO05D005353 1.5e-14 84.3 59 69.5
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 1.5e-14 84.3 81 54.3
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 1.5e-14 84.3 72 59.7
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-14 84.3 125 44.0
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 1.5e-14 84.3 61 65.6
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 1.9e-14 84.0 61 63.9
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 2.5e-14 83.6 66 65.2
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 3.3e-14 83.2 59 66.1
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 4.3e-14 82.8 61 63.9
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 4.3e-14 82.8 61 63.9
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 4.3e-14 82.8 61 67.2
SHI00996 Sapria himalayana HOM05D002920 ORTHO05D000014 4.3e-14 82.8 81 59.3
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 5.6e-14 82.4 59 69.5
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 5.6e-14 82.4 59 66.1
SHI08624 Sapria himalayana HOM05D000023 ORTHO05D000014 5.6e-14 82.4 81 58.0
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 7.3e-14 82.0 59 69.5
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 9.5e-14 81.6 62 64.5
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 9.5e-14 81.6 59 66.1
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 9.5e-14 81.6 69 62.3
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.2e-13 81.3 78 56.4
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 1.6e-13 80.9 61 67.2
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 1.6e-13 80.9 63 65.1
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 2.1e-13 80.5 61 62.3
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 2.8e-13 80.1 78 56.4
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 2.8e-13 80.1 72 61.1
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 3.6e-13 79.7 62 61.3
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 4.7e-13 79.3 61 62.3
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 4.7e-13 79.3 73 57.5
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 4.7e-13 79.3 63 60.3
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 6.2e-13 79.0 61 65.6
SHI28524 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-13 79.0 148 37.8
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 8.0e-13 78.6 59 67.8
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 8.0e-13 78.6 59 67.8
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 8.0e-13 78.6 78 55.1
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 8.0e-13 78.6 78 55.1
SHI21585 Sapria himalayana HOM05D000023 ORTHO05D002750 8.0e-13 78.6 67 53.7
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 1.1e-12 78.2 59 64.4
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 3.1e-12 76.6 62 62.9
Cc00_g05790 Coffea canephora HOM05D004490 ORTHO05D005353 4.0e-12 76.3 75 54.7
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 5.2e-12 75.9 61 63.9
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 5.2e-12 75.9 73 52.1
SHI08345 Sapria himalayana HOM05D000023 ORTHO05D002750 5.2e-12 75.9 77 51.9
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 8.9e-12 75.1 59 62.7
FAN25G1655 Fragaria x ananassa HOM05D004490 ORTHO05D005353 8.9e-12 75.1 59 62.7
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 2.0e-11 73.9 69 58.0
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.0e-11 73.9 59 61.0
SHI09034 Sapria himalayana HOM05D000023 ORTHO05D002750 2.0e-11 73.9 66 60.6
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 2.6e-11 73.6 62 59.7
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 2.6e-11 73.6 84 52.4
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 3.4e-11 73.2 80 50.0
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 4.4e-11 72.8 59 62.7
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 4.4e-11 72.8 59 59.3
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 4.4e-11 72.8 53 67.9
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 4.4e-11 72.8 78 53.8
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 4.4e-11 72.8 71 50.7
FAN11G3432 Fragaria x ananassa HOM05D004490 ORTHO05D005353 7.5e-11 72.0 59 59.3
SHI22487 Sapria himalayana HOM05D000023 ORTHO05D002750 7.5e-11 72.0 87 47.1
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 9.8e-11 71.6 83 50.6
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 9.8e-11 71.6 83 50.6
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 9.8e-11 71.6 59 62.7
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 9.8e-11 71.6 83 50.6
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 9.8e-11 71.6 59 62.7
SHI32488 Sapria himalayana HOM05D000023 ORTHO05D002750 9.8e-11 71.6 81 49.4
SEGI_26294 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 9.8e-11 71.6 65 50.8
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 1.3e-10 71.2 59 61.0
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 1.7e-10 70.9 59 61.0
SHI13828 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-10 70.9 45 71.1
SHI21613 Sapria himalayana HOM05D004277 ORTHO05D002750 1.7e-10 70.9 43 72.1
SHI32462 Sapria himalayana HOM05D000023 ORTHO05D002750 1.7e-10 70.9 70 55.7
SHI12368 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-10 70.5 44 72.7
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.9e-10 70.1 59 59.3
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 3.7e-10 69.7 68 48.5
SHI28488 Sapria himalayana HOM05D000023 ORTHO05D002750 3.7e-10 69.7 46 69.6
BNapus_Darmor_BZH_scaffold_278p00030 Brassica napus HOM05D004490 ORTHO05D005353 4.9e-10 69.3 59 61.0
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 8.3e-10 68.6 64 53.1
SHI00822 Sapria himalayana HOM05D000023 ORTHO05D002750 1.1e-09 68.2 42 69.0
SHI21551 Sapria himalayana HOM05D000030 ORTHO05D002750 1.4e-09 67.8 77 48.1
SHI01247 Sapria himalayana HOM05D000023 ORTHO05D002750 1.9e-09 67.4 73 53.4
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 2.4e-09 67.0 75 42.7
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 4.1e-09 66.2 61 50.8
HPP92_020178 Vanilla planifolia HOM05D004490 ORTHO05D005353 4.1e-09 66.2 61 50.8
SHI25003 Sapria himalayana HOM05D004426 ORTHO05D002750 5.4e-09 65.9 64 51.6
SHI29852 Sapria himalayana HOM05D000023 ORTHO05D000014 5.4e-09 65.9 43 72.1
SHI01315 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-09 65.5 44 63.6
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 7.0e-09 65.5 81 44.4
SHI20215 Sapria himalayana HOM05D004490 ORTHO05D005353 7.0e-09 65.5 88 40.9
SHI28986 Sapria himalayana HOM05D000023 ORTHO05D002750 7.0e-09 65.5 47 63.8
SHI00440 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-09 65.1 42 69.0
SHI12781 Sapria himalayana HOM05D000023 ORTHO05D002750 9.2e-09 65.1 42 71.4
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 1.2e-08 64.7 59 59.3
CDE02G2953 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.6e-08 64.3 59 54.2
SHI27485 Sapria himalayana HOM05D004447 ORTHO05D005973 1.6e-08 64.3 44 68.2
SHI08342 Sapria himalayana HOM05D000023 ORTHO05D002750 3.5e-08 63.2 44 63.6
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 3.5e-08 63.2 43 65.1
SHI03332 Sapria himalayana HOM05D003492 ORTHO05D005115 6.0e-08 62.4 69 46.4
SHI31181 Sapria himalayana HOM05D000023 ORTHO05D002750 6.0e-08 62.4 42 69.0
SHI28506 Sapria himalayana HOM05D000023 ORTHO05D000014 7.8e-08 62.0 42 66.7
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 1.0e-07 61.6 43 65.1
SHI20191 Sapria himalayana HOM05D001459 ORTHO05D002750 1.7e-07 60.8 45 64.4
SHI05643 Sapria himalayana HOM05D000023 ORTHO05D002750 3.0e-07 60.1 43 62.8
SHI15013 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-07 59.7 43 67.4
SHI11759 Sapria himalayana HOM05D000023 ORTHO05D002750 5.0e-07 59.3 42 66.7
SHI20461 Sapria himalayana HOM05D000023 ORTHO05D002750 5.0e-07 59.3 42 64.3
SHI26805 Sapria himalayana HOM05D002012 ORTHO05D002750 5.0e-07 59.3 42 61.9
SHI00079 Sapria himalayana HOM05D000023 ORTHO05D002750 6.6e-07 58.9 39 71.8
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 8.6e-07 58.5 56 53.6
SHI20408 Sapria himalayana HOM05D004595 ORTHO05D002750 8.6e-07 58.5 46 60.9
SHI25892 Sapria himalayana HOM05D000023 ORTHO05D002750 8.6e-07 58.5 40 60.0
SHI17644 Sapria himalayana HOM05D000023 ORTHO05D002750 1.1e-06 58.2 46 58.7
SHI28185 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-06 58.2 94 38.3
SHI16604 Sapria himalayana HOM05D000023 ORTHO05D002750 2.5e-06 57.0 119 34.5
SHI02473 Sapria himalayana HOM05D000023 ORTHO05D002750 3.3e-06 56.6 44 56.8
SHI03501 Sapria himalayana HOM05D000023 ORTHO05D002750 4.3e-06 56.2 45 64.4
SHI13516 Sapria himalayana HOM05D003135 ORTHO05D003715 4.3e-06 56.2 45 55.6
SHI35707 Sapria himalayana HOM05D000023 ORTHO05D002750 4.3e-06 56.2 70 45.7
SHI02424 Sapria himalayana HOM05D000023 ORTHO05D002750 5.6e-06 55.8 54 55.6
SHI06021 Sapria himalayana HOM05D000023 ORTHO05D002750 5.6e-06 55.8 44 56.8
Sopen01g015890 Solanum pennellii HOM05D000023 ORTHO05D002750 5.6e-06 55.8 67 40.3
SHI22921 Sapria himalayana HOM05D000428 ORTHO05D005608 7.3e-06 55.5 49 55.1
SHI40744 Sapria himalayana HOM05D000023 ORTHO05D000014 7.3e-06 55.5 59 50.8
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 9.5e-06 55.1 42 61.9


User provided reference genes

Program Settings