Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08978 Sapria himalayana HOM05D000198 ORTHO05D003365 8.2e-88 327.0 164 100.0
Hma1.2p1_0849F.1_g228096 Hydrangea macrophylla HOM05D000198 ORTHO05D003365 1.5e-25 120.2 144 47.2
Sabra12G0053800 Salix brachista HOM05D000198 ORTHO05D003365 4.4e-25 118.6 144 48.6
Potri.012G075600 Populus trichocarpa HOM05D000198 ORTHO05D003365 9.9e-25 117.5 144 47.9
Prupe.5G179700 Prunus persica HOM05D000198 ORTHO05D003365 9.9e-25 117.5 144 47.9
Sabra15G0095800 Salix brachista HOM05D000198 ORTHO05D003365 2.2e-24 116.3 114 54.4
Manes.06G100200 Manihot esculenta HOM05D000198 ORTHO05D003365 2.9e-24 115.9 114 54.4
Sabra15G0094900 Salix brachista HOM05D000198 ORTHO05D003365 2.9e-24 115.9 114 53.5
Ciclev10019800m.g Citrus clementina HOM05D000198 ORTHO05D003365 3.7e-24 115.5 114 53.5
Duzib205G0810 Durio zibethinus HOM05D000198 ORTHO05D003365 3.7e-24 115.5 144 47.9
TWI15G0338 Tripterygium wilfordii HOM05D000198 ORTHO05D003365 8.3e-24 114.4 114 54.4
RcHm_v2.0_Chr7g0179781 Rosa chinensis HOM05D000198 ORTHO05D003365 1.4e-23 113.6 114 54.4
Cfa019065 Carpinus fangiana HOM05D000198 ORTHO05D003365 2.4e-23 112.8 144 45.8
Duzib068G0738 Durio zibethinus HOM05D000198 ORTHO05D003365 2.4e-23 112.8 114 54.4
MBI14_g15699_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D003365 2.4e-23 112.8 144 44.4
MD14G1187400 Malus domestica HOM05D000198 ORTHO05D003365 2.4e-23 112.8 114 54.4
Potri.015G070600 Populus trichocarpa HOM05D000198 ORTHO05D003365 2.4e-23 112.8 114 52.6
Prupe.5G179800 Prunus persica HOM05D000198 ORTHO05D003365 2.4e-23 112.8 114 53.5
QL10p012294 Quercus lobata HOM05D000198 ORTHO05D003365 2.4e-23 112.8 144 46.5
Rhsim08G0167700 Rhododendron simsii HOM05D000198 ORTHO05D003365 4.1e-23 112.1 114 54.4
Thecc.03G003200 Theobroma cacao HOM05D000198 ORTHO05D003365 4.1e-23 112.1 113 54.0
Thhalv10018437m.g Eutrema salsugineum HOM05D000198 ORTHO05D003365 7.1e-23 111.3 144 44.4
FAN04G2709 Fragaria x ananassa HOM05D000198 ORTHO05D003365 7.1e-23 111.3 114 53.5
Gohir.D07G067600 Gossypium hirsutum HOM05D000198 ORTHO05D003365 7.1e-23 111.3 114 52.6
Atru.chr9.2400 Acer truncatum HOM05D000198 ORTHO05D003365 9.2e-23 110.9 140 45.7
TAR629G0665 Trochodendron aralioides HOM05D000198 ORTHO05D003365 9.2e-23 110.9 114 54.4
Dinv20700 Davidia involucrata HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 51.8
Duzib068G1286 Durio zibethinus HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 51.8
Hma1.2p1_0002F.1_g002875 Hydrangea macrophylla HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 53.5
MD06G1181500 Malus domestica HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 53.5
QL02p078556 Quercus lobata HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 53.5
Sed0016621 Sechium edule HOM05D000198 ORTHO05D003365 1.2e-22 110.5 114 52.6
MSTRG.9663 Avicennia marina HOM05D000198 ORTHO05D003365 1.6e-22 110.2 114 51.8
CiPaw.11G032300 Carya illinoinensis HOM05D000198 ORTHO05D003365 1.6e-22 110.2 114 52.6
FvH4_5g16350 Fragaria vesca HOM05D000198 ORTHO05D003365 1.6e-22 110.2 114 53.5
FAN18G3532 Fragaria x ananassa HOM05D000198 ORTHO05D003365 1.6e-22 110.2 114 53.5
PGR083G1998 Punica granatum HOM05D000198 ORTHO05D003365 1.6e-22 110.2 114 51.8
Gorai.001G071200 Gossypium raimondii HOM05D000198 ORTHO05D003365 2.1e-22 109.8 114 51.8
Gohir.A07G063000 Gossypium hirsutum HOM05D000198 ORTHO05D003365 2.7e-22 109.4 114 51.8
Lj5C120T17 Lonicera japonica HOM05D000198 ORTHO05D003365 2.7e-22 109.4 114 53.5
Sed0010361 Sechium edule HOM05D000198 ORTHO05D003365 2.7e-22 109.4 114 50.9
Ah.11g046210 Amaranthus hybridus HOM05D000198 ORTHO05D003365 3.5e-22 109.0 113 53.1
MELO3C017125.2 Cucumis melo HOM05D000198 ORTHO05D003365 3.5e-22 109.0 140 44.3
RcHm_v2.0_Chr2g0170111 Rosa chinensis HOM05D000198 ORTHO05D003365 3.5e-22 109.0 140 43.6
TWI60G0566 Tripterygium wilfordii HOM05D000198 ORTHO05D003365 3.5e-22 109.0 114 52.6
CARHR068240 Cardamine hirsuta HOM05D000198 ORTHO05D003365 4.6e-22 108.6 114 51.8
Thecc.03G003100 Theobroma cacao HOM05D000198 ORTHO05D003365 4.6e-22 108.6 144 44.4
MSTRG.4388 Avicennia marina HOM05D000198 ORTHO05D003365 6.0e-22 108.2 114 52.6
Haze_07435 Corylus avellana HOM05D000198 ORTHO05D003365 6.0e-22 108.2 113 52.2
THA.LOC104817887 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 6.0e-22 108.2 144 44.4
A07p29170 Brassica napus HOM05D000198 ORTHO05D003365 7.8e-22 107.8 144 43.1
BraA07t30556Z Brassica rapa HOM05D000198 ORTHO05D003365 7.8e-22 107.8 144 43.1
CSS0036645 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D003365 7.8e-22 107.8 114 50.9
CsaV3_1G001830 Cucumis sativus L. HOM05D000198 ORTHO05D003365 7.8e-22 107.8 114 50.9
Sp5g30060 Schrenkiella parvula HOM05D000198 ORTHO05D003365 1.0e-21 107.5 114 50.9
Ah.11g046200 Amaranthus hybridus HOM05D000198 ORTHO05D003365 1.3e-21 107.1 144 45.1
Gohir.A11G040800 Gossypium hirsutum HOM05D000198 ORTHO05D003365 1.3e-21 107.1 114 50.9
Gorai.007G047400 Gossypium raimondii HOM05D000198 ORTHO05D003365 1.3e-21 107.1 114 50.9
vmacro19355 Vaccinium macrocarpon HOM05D000198 ORTHO05D003365 1.3e-21 107.1 114 52.6
Aa31LG4G5130 Aethionema arabicum HOM05D000198 ORTHO05D003365 1.7e-21 106.7 144 42.4
BcaB02g06972 Brassica carinata HOM05D000198 ORTHO05D003365 1.7e-21 106.7 144 42.4
AL2G34800 Arabidopsis lyrata HOM05D000198 ORTHO05D003365 2.3e-21 106.3 114 50.0
ClCG06G016680 Citrullus lanatus HOM05D000198 ORTHO05D003365 2.3e-21 106.3 114 50.9
PSO339G4870 Papaver somniferum HOM05D000198 ORTHO05D003365 3.0e-21 105.9 140 44.3
PGR083G0053 Punica granatum HOM05D000198 ORTHO05D003365 3.0e-21 105.9 144 41.7
THA.LOC104818220 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 3.0e-21 105.9 114 49.1
AT1G74920 Arabidopsis thaliana HOM05D000198 ORTHO05D003365 3.9e-21 105.5 114 49.1
HanXRQChr05g0155461 Helianthus annuus HOM05D000198 ORTHO05D003365 3.9e-21 105.5 114 51.8
MD06G1181400 Malus domestica HOM05D000198 ORTHO05D003365 3.9e-21 105.5 134 44.8
Aqoxy3G03122 Aquilegia oxysepala HOM05D000198 ORTHO05D003365 5.1e-21 105.1 114 50.9
Carub.0002s2171 Capsella rubella HOM05D000198 ORTHO05D003365 6.6e-21 104.8 144 41.7
CDE06G2133 Ceratophyllum demersum HOM05D000198 ORTHO05D003365 6.6e-21 104.8 114 48.2
AUR62031047 Chenopodium quinoa HOM05D000198 ORTHO05D003365 6.6e-21 104.8 144 43.1
Actinidia04957 Actinidia chinensis HOM05D000198 ORTHO05D003365 8.6e-21 104.4 140 43.6
Cc04_g13600 Coffea canephora HOM05D000198 ORTHO05D003365 8.6e-21 104.4 114 50.0
C06p33060 Brassica napus HOM05D000198 ORTHO05D003365 1.1e-20 104.0 140 42.9
Gohir.D11G044000 Gossypium hirsutum HOM05D000198 ORTHO05D003365 1.1e-20 104.0 114 50.0
HanXRQChr09g0271671 Helianthus annuus HOM05D000198 ORTHO05D003365 1.9e-20 103.2 140 42.9
MD14G1187300 Malus domestica HOM05D000198 ORTHO05D003365 1.9e-20 103.2 114 49.1
BolC6t38422H Brassica oleracea HOM05D000198 ORTHO05D003365 2.5e-20 102.8 140 42.1
Lsat_1_v5_gn_4_73580 Lactuca sativa HOM05D000198 ORTHO05D003365 2.5e-20 102.8 114 48.2
THA.LOC104821472 Tarenaya hassleriana HOM05D000198 ORTHO05D003365 2.5e-20 102.8 114 48.2
EL10Ac5g10834 Beta vulgaris HOM05D000198 ORTHO05D003365 3.3e-20 102.4 144 41.7
EL10Ac5g10835 Beta vulgaris HOM05D000198 ORTHO05D003365 3.3e-20 102.4 144 43.1
CARHR156890 Cardamine hirsuta HOM05D000198 ORTHO05D003365 3.3e-20 102.4 144 43.1
PSO384G1175 Papaver somniferum HOM05D000198 ORTHO05D003365 3.3e-20 102.4 140 43.6
SalBow5G1824 Salvia bowleyana HOM05D000198 ORTHO05D003365 3.3e-20 102.4 114 50.0
Sc12g0005650 Simmondsia chinensis HOM05D000198 ORTHO05D003365 3.3e-20 102.4 114 47.4
EL10Ac7g18109 Beta vulgaris HOM05D000198 ORTHO05D003365 4.3e-20 102.1 144 41.7
ATR0712G173 Amborella trichopoda HOM05D000198 ORTHO05D003365 5.6e-20 101.7 114 48.2
AT3G48170 Arabidopsis thaliana HOM05D000198 ORTHO05D003365 5.6e-20 101.7 144 41.7
AUR62008285 Chenopodium quinoa HOM05D000198 ORTHO05D003365 5.6e-20 101.7 136 43.4
AUR62031049 Chenopodium quinoa HOM05D000198 ORTHO05D003365 5.6e-20 101.7 136 43.4
Eucgr.B00336 Eucalyptus grandis HOM05D000198 ORTHO05D003365 1.2e-19 100.5 114 48.2
Rhsim08G0167500 Rhododendron simsii HOM05D000198 ORTHO05D003365 1.2e-19 100.5 162 42.0
SalBow3G4247 Salvia bowleyana HOM05D000198 ORTHO05D003365 1.2e-19 100.5 144 45.1
HPP92_010830 Vanilla planifolia HOM05D000198 ORTHO05D003365 1.2e-19 100.5 144 42.4
Prupe.3G277000 Prunus persica HOM05D000198 ORTHO05D003365 1.6e-19 100.1 144 38.9
PGR142G1244 Punica granatum HOM05D000198 ORTHO05D003365 1.6e-19 100.1 135 43.7
Migut.D01906 Erythranthe guttata HOM05D000198 ORTHO05D003365 2.1e-19 99.8 142 42.3
Lalb_Chr07g0182551 Lupinus albus HOM05D000198 ORTHO05D003365 2.1e-19 99.8 144 41.7
GSVIVG01032588001 Vitis vinifera HOM05D000198 ORTHO05D003365 2.1e-19 99.8 114 49.1
PSO161G0059 Papaver somniferum HOM05D000198 ORTHO05D003365 2.8e-19 99.4 114 47.4
PSO478G0541 Papaver somniferum HOM05D000198 ORTHO05D003365 2.8e-19 99.4 114 47.4
Medtr3g078550 Medicago truncatula HOM05D000198 ORTHO05D003365 3.6e-19 99.0 140 40.7
Medtr4g106510 Medicago truncatula HOM05D000198 ORTHO05D003365 3.6e-19 99.0 144 42.4
BraA06t25682Z Brassica rapa HOM05D000198 ORTHO05D003365 6.2e-19 98.2 144 39.6
Medtr3g078490 Medicago truncatula HOM05D000198 ORTHO05D003365 6.2e-19 98.2 140 40.7
HPP92_010832 Vanilla planifolia HOM05D000198 ORTHO05D003365 6.2e-19 98.2 113 48.7
VMungo1215G3368 Vigna mungo HOM05D000198 ORTHO05D003365 6.2e-19 98.2 114 49.1
Carub.0005s1427 Capsella rubella HOM05D000198 ORTHO05D003365 8.1e-19 97.8 144 40.3
Glyma.06G186300 Glycine max HOM05D000198 ORTHO05D003365 8.1e-19 97.8 140 40.0
SGA_v2.0_scaffold7G04110 Striga asiatica HOM05D000198 ORTHO05D003365 8.1e-19 97.8 112 45.5
AL5G27500 Arabidopsis lyrata HOM05D000198 ORTHO05D003365 1.1e-18 97.4 144 40.3
BcaB02g10670 Brassica carinata HOM05D000198 ORTHO05D003365 1.1e-18 97.4 144 40.3
Lalb_Chr07g0182521 Lupinus albus HOM05D000198 ORTHO05D003365 1.1e-18 97.4 114 46.5
Sp5g13870 Schrenkiella parvula HOM05D000198 ORTHO05D003365 1.1e-18 97.4 114 46.5
TPR.G37521 Trifolium pratense HOM05D000198 ORTHO05D003365 1.1e-18 97.4 144 42.4
Ca_21880_v3 Cicer arietinum L. HOM05D000198 ORTHO05D003365 1.4e-18 97.1 144 41.7
arahy.Tifrunner.gnm1.ann1.M4G3QU Arachis hypogaea HOM05D000198 ORTHO05D003365 1.8e-18 96.7 144 40.3
arahy.Tifrunner.gnm1.ann1.59SDUF Arachis hypogaea HOM05D000198 ORTHO05D003365 2.4e-18 96.3 114 46.5
Psat4g055120 Pisum sativum HOM05D000198 ORTHO05D003365 2.4e-18 96.3 140 40.7
CANSAT80G1940 Cannabis sativa HOM05D000198 ORTHO05D003365 3.1e-18 95.9 114 47.4
Phvul.009G182300 Phaseolus vulgaris HOM05D000198 ORTHO05D003365 3.1e-18 95.9 140 39.3
Lalb_Chr13g0297971 Lupinus albus HOM05D000198 ORTHO05D003365 4.0e-18 95.5 114 45.6
unitig_60.g25414 Utricularia gibba HOM05D000198 ORTHO05D003365 4.0e-18 95.5 110 46.4
arahy.Tifrunner.gnm1.ann1.QCS9HL Arachis hypogaea HOM05D000198 ORTHO05D003365 5.2e-18 95.1 114 45.6
arahy.Tifrunner.gnm1.ann1.JTTA2P Arachis hypogaea HOM05D000198 ORTHO05D003365 6.8e-18 94.7 140 40.0
MSTRG.11428 Avicennia marina HOM05D000198 ORTHO05D003365 6.8e-18 94.7 114 45.6
Oeu005688.1 Olea europaea HOM05D000198 ORTHO05D003365 6.8e-18 94.7 144 41.0
GSVIVG01007829001 Vitis vinifera HOM05D000198 ORTHO05D003365 6.8e-18 94.7 114 45.6
Thhalv10010305m.g Eutrema salsugineum HOM05D000198 ORTHO05D003365 8.9e-18 94.4 140 40.0
Glyma.05G033500 Glycine max HOM05D000198 ORTHO05D003365 8.9e-18 94.4 114 46.5
VMungo1309G2302 Vigna mungo HOM05D000198 ORTHO05D003365 8.9e-18 94.4 159 35.8
Phvul.003G196700 Phaseolus vulgaris HOM05D000198 ORTHO05D003365 1.2e-17 94.0 114 46.5
A06p27430 Brassica napus HOM05D000198 ORTHO05D003365 1.5e-17 93.6 144 38.2
BcaC01g02312 Brassica carinata HOM05D000198 ORTHO05D003365 2.0e-17 93.2 144 38.2
BcaC01g02323 Brassica carinata HOM05D000198 ORTHO05D003365 2.0e-17 93.2 144 38.2
C03p66630 Brassica napus HOM05D000198 ORTHO05D003365 2.0e-17 93.2 144 38.2
C03p66720 Brassica napus HOM05D000198 ORTHO05D003365 2.0e-17 93.2 144 38.2
BolC3t18934H Brassica oleracea HOM05D000198 ORTHO05D003365 2.0e-17 93.2 144 38.2
Ca_16211_v3 Cicer arietinum L. HOM05D000198 ORTHO05D003365 2.0e-17 93.2 140 39.3
ECA232G3153 Erigeron canadensis HOM05D002643 ORTHO05D003365 2.0e-17 93.2 131 39.7
Psat0s4962g0080 Pisum sativum HOM05D000198 ORTHO05D003365 2.6e-17 92.8 159 35.8
Aa31LG4G16770 Aethionema arabicum HOM05D000198 ORTHO05D003365 5.8e-17 91.7 114 43.9
AagrBONN_evm.TU.Sc2ySwM_228.504 Anthoceros agrestis HOM05D000198 ORTHO05D003365 5.8e-17 91.7 144 38.9
Nitab4.5_0003386g0060 Nicotiana tabacum HOM05D000198 ORTHO05D003365 5.8e-17 91.7 112 48.2
Peaxi162Scf00017g02622 Petunia axillaris HOM05D000198 ORTHO05D003365 7.6e-17 91.3 112 49.1
Pp3c5_22400 Physcomitrium patens HOM05D000198 ORTHO05D003365 7.6e-17 91.3 142 37.3
Solyc06g071290.3 Solanum lycopersicum HOM05D000198 ORTHO05D003365 9.9e-17 90.9 129 43.4
Lj4g0004071 Lotus japonicus HOM05D000198 ORTHO05D003365 1.3e-16 90.5 144 40.3
CAN.G853.16 Capsicum annuum HOM05D000198 ORTHO05D003365 1.7e-16 90.1 112 48.2
Sopen06g027590 Solanum pennellii HOM05D000198 ORTHO05D003365 1.7e-16 90.1 129 44.2
Peaxi162Scf00689g00420 Petunia axillaris HOM05D000198 ORTHO05D003365 2.2e-16 89.7 131 42.7
CAN.G628.66 Capsicum annuum HOM05D000198 ORTHO05D003365 2.9e-16 89.4 157 37.6
Nitab4.5_0000003g0280 Nicotiana tabacum HOM05D000198 ORTHO05D003365 2.9e-16 89.4 142 39.4
BolC3t18940H Brassica oleracea HOM05D000198 ORTHO05D003365 3.8e-16 89.0 144 36.8
Nitab4.5_0002101g0060 Nicotiana tabacum HOM05D000198 ORTHO05D003365 4.9e-16 88.6 112 45.5
Hund20245 Selenicereus undatus HOM05D000198 ORTHO05D003365 8.4e-16 87.8 101 46.5
PGSC0003DMG400033028 Solanum tuberosum HOM05D000198 ORTHO05D003365 8.4e-16 87.8 129 42.6
Os08g0424500 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D003365 1.4e-15 87.0 144 36.8
Mapoly0039s0054 Marchantia polymorpha HOM05D000198 ORTHO05D003365 2.4e-15 86.3 161 37.9
PGSC0003DMG400024582 Solanum tuberosum HOM05D000198 ORTHO05D003365 3.2e-15 85.9 112 47.3
Nitab4.5_0005655g0040 Nicotiana tabacum HOM05D000198 ORTHO05D003365 7.1e-15 84.7 112 46.4
Solyc03g113800.3 Solanum lycopersicum HOM05D000198 ORTHO05D003365 7.1e-15 84.7 112 46.4
Sopen03g032850 Solanum pennellii HOM05D000198 ORTHO05D003365 7.1e-15 84.7 112 46.4
Os04g0464200 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D003365 1.2e-14 84.0 130 40.0
Zm00001eb424410 Zea mays HOM05D000198 ORTHO05D003365 2.1e-14 83.2 140 37.9
GSVIVG01007827001 Vitis vinifera HOM05D000198 ORTHO05D003365 2.7e-14 82.8 151 37.1
Zm00001eb041930 Zea mays HOM05D000198 ORTHO05D003365 1.0e-13 80.9 110 40.9
CBR_g22951 Chara braunii HOM05D000198 ORTHO05D003365 9.6e-12 74.3 142 32.4
SMO143G0191 Selaginella moellendorffii HOM05D000198 ORTHO05D003365 2.1e-11 73.2 144 32.6
Nn4g22927 Nelumbo nucifera HOM05D000198 ORTHO05D003365 2.8e-11 72.8 123 39.0
CAN.G375.75 Capsicum annuum HOM05D000444 ORTHO05D003365 3.6e-11 72.4 107 42.1
DCAR_016507 Daucus carota HOM05D000198 ORTHO05D003365 6.2e-11 71.6 79 53.2
COL.COLO4_21444 Corchorus olitorius HOM05D000198 ORTHO05D003365 1.4e-10 70.5 80 51.2
Lsat_1_v5_gn_5_17920 Lactuca sativa HOM05D000198 ORTHO05D003365 1.8e-10 70.1 90 44.4
Cre13.g605650 Chlamydomonas reinhardtii HOM05D000198 ORTHO05D003365 2.2e-08 63.2 144 31.9
FAN13G0689 Fragaria x ananassa HOM05D000198 ORTHO05D003365 1.2e-06 57.4 49 59.2
Zm00001eb179190 Zea mays HOM05D000198 ORTHO05D003365 1.6e-06 57.0 48 60.4
Lsat_1_v5_gn_4_68980 Lactuca sativa HOM05D000198 ORTHO05D003365 3.5e-06 55.8 55 47.3
HanXRQChr10g0304351 Helianthus annuus HOM05D000198 ORTHO05D003365 7.8e-06 54.7 45 62.2


User provided reference genes

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