Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.0e-303 1043.9 620 100.0
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 3.9e-138 496.1 614 58.5
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 3.9e-122 443.0 605 55.9
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 5.6e-121 439.1 610 57.5
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.2e-120 438.0 626 50.3
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 6.2e-120 435.6 612 48.4
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 8.1e-120 435.3 612 54.7
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.8e-119 434.1 634 44.0
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 8.9e-119 431.8 619 54.3
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 1.9e-113 414.1 612 52.5
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.4e-111 407.1 609 53.9
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 5.2e-111 406.0 625 43.0
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.4e-110 403.3 625 45.6
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 9.9e-110 401.7 610 52.3
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.4e-108 397.1 630 40.6
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 5.4e-108 396.0 608 48.0
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.0e-106 390.2 617 49.1
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 6.6e-106 389.0 606 41.7
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 3.3e-105 386.7 614 50.8
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 3.6e-104 383.3 606 51.0
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-104 383.3 640 44.7
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 9.0e-103 378.6 619 50.9
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.3e-101 374.8 618 50.5
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.6e-99 367.9 609 48.4
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 2.1e-99 367.5 649 45.6
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 3.5e-99 366.7 613 47.3
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.7e-98 364.4 610 50.7
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.7e-98 364.4 630 43.5
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 5.1e-98 362.8 615 47.0
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 4.3e-97 359.8 613 48.9
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 2.1e-96 357.5 608 49.8
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 8.1e-96 355.5 609 47.5
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 4.0e-95 353.2 613 47.8
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 4.5e-94 349.7 614 47.7
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 3.8e-93 346.7 618 49.5
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.5e-92 342.8 610 49.0
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.2e-91 341.7 636 43.1
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.6e-91 341.3 613 43.7
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.1e-91 340.9 633 44.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.8e-90 337.8 610 42.6
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 1.1e-89 335.1 614 47.1
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.8e-88 330.5 585 49.1
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 4.8e-88 329.7 617 47.8
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.0e-87 326.6 628 39.0
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 6.9e-87 325.9 607 42.8
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.2e-86 325.1 627 47.8
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.2e-86 325.1 627 47.8
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.2e-86 325.1 627 48.2
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.2e-85 320.9 617 45.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.1e-84 318.5 622 48.1
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.4e-84 318.2 622 42.1
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 3.2e-84 317.0 623 44.9
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 3.2e-84 317.0 623 44.9
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 7.9e-83 312.4 608 48.0
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.8e-82 311.2 614 45.8
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.0e-82 310.5 609 40.1
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 6.7e-82 309.3 614 45.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.9e-81 307.8 614 45.1
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.5e-81 307.4 581 40.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.3e-80 305.1 630 44.1
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.8e-80 303.9 621 45.7
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.8e-80 303.9 592 46.5
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 4.8e-80 303.1 608 44.6
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 6.3e-80 302.8 627 45.1
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 3.1e-79 300.4 523 45.3
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 4.1e-79 300.1 479 54.7
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 6.9e-79 299.3 614 47.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.2e-78 298.5 610 43.1
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.2e-77 294.3 558 46.2
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 3.8e-77 293.5 608 44.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.4e-76 291.6 542 48.7
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.6e-75 288.1 534 42.1
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 4.6e-75 286.6 642 42.4
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 7.9e-75 285.8 611 44.4
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.3e-74 285.0 610 44.6
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 2.3e-74 284.3 612 42.0
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 1.3e-72 278.5 386 52.8
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 4.1e-71 273.5 608 43.9
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 5.3e-71 273.1 502 47.6
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.2e-70 271.9 608 42.8
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.0e-69 268.9 613 42.9
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.9e-68 264.6 620 43.1
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 5.7e-65 253.1 624 44.4
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 7.4e-65 252.7 621 44.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.7e-64 251.5 625 32.2
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.7e-64 251.5 625 32.2
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 2.8e-64 250.8 615 42.6
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 8.2e-64 249.2 416 48.6
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 3.4e-62 243.8 617 43.4
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 4.5e-62 243.4 609 43.3
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 2.9e-61 240.7 619 43.5
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.4e-60 238.4 508 40.4
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 5.5e-60 236.5 617 40.7
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 7.2e-60 236.1 537 47.1
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 3.3e-57 227.3 354 59.3
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 5.7e-57 226.5 646 30.7
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.8e-55 221.5 507 44.6
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 7.7e-54 216.1 476 48.1
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.1e-52 212.2 604 42.1
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 5.5e-52 209.9 627 37.8
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 2.3e-50 204.5 552 38.4
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.1e-47 195.7 626 40.1
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.6e-46 191.8 579 40.9
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-39 168.3 313 39.9
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.1e-27 128.3 213 40.8
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.7e-24 118.6 155 43.2
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 4.0e-18 97.4 329 47.7
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 2.0e-14 85.1 604 34.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.5e-14 84.3 146 41.1
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.1e-10 72.8 49 71.4
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 3.1e-10 71.2 49 69.4
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.2e-08 65.1 193 33.7


User provided reference genes

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